RNA–Protein interactions for RNA: ENST00000369407.3

PHGDH-201, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 3,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-201ENST00000369407 GNAT1P11488 350 aa13.12□□□□□ -0.31
PHGDH-201ENST00000369407 CALB2P22676 271 aa13.12□□□□□ -0.31
PHGDH-201ENST00000369407 SHMT1P34896 483 aa13.12□□□□□ -0.31
PHGDH-201ENST00000369407 NT5C2P49902 561 aa13.12□□□□□ -0.31
PHGDH-201ENST00000369407 SETDB1Q15047 1291 aa13.12□□□□□ -0.31
PHGDH-201ENST00000369407 RFWD3Q6PCD5 774 aa13.12□□□□□ -0.31
PHGDH-201ENST00000369407 ARHGEF18Q6ZSZ5 1173 aa13.12□□□□□ -0.31
PHGDH-201ENST00000369407 ZFPM1Q8IX07 1006 aa13.12□□□□□ -0.31
PHGDH-201ENST00000369407 CNBD1Q8NA66 436 aa13.12□□□□□ -0.31
PHGDH-201ENST00000369407 UCMAQ8WVF2 138 aa13.12□□□□□ -0.31
PHGDH-201ENST00000369407 ITFG2Q969R8 447 aa13.12□□□□□ -0.31
PHGDH-201ENST00000369407 LRRC37BQ96QE4 947 aa13.12□□□□□ -0.31
PHGDH-201ENST00000369407 RAB3IPQ96QF0 476 aaPredicted RBP13.12□□□□□ -0.31
PHGDH-201ENST00000369407 PKD2L1Q9P0L9 805 aa13.12□□□□□ -0.31
PHGDH-201ENST00000369407 WRAP73Q9P2S5 460 aaPredicted RBP13.12□□□□□ -0.31
PHGDH-201ENST00000369407 PHTF1Q9UMS5 762 aa13.12□□□□□ -0.31
PHGDH-201ENST00000369407 IGKV6D-41A0A0C4DH26 115 aa13.11□□□□□ -0.31
PHGDH-201ENST00000369407 BCRP11274 1271 aa13.11□□□□□ -0.31
PHGDH-201ENST00000369407 RRM1P23921 792 aa13.11□□□□□ -0.31
PHGDH-201ENST00000369407 PTDSS1P48651 473 aaKnown RBP13.11□□□□□ -0.31
PHGDH-201ENST00000369407 GABPAQ06546 454 aa13.11□□□□□ -0.31
PHGDH-201ENST00000369407 RNF43Q68DV7 783 aa13.11□□□□□ -0.31
PHGDH-201ENST00000369407 ZNF720Q7Z2F6 126 aa13.11□□□□□ -0.31
PHGDH-201ENST00000369407 WNT8AQ9H1J5 351 aa13.11□□□□□ -0.31
PHGDH-201ENST00000369407 C12orf65Q9H3J6 166 aaKnown RBP13.11□□□□□ -0.31
PHGDH-201ENST00000369407 SPATA31A1Q5TZJ5 1347 aa13.11□□□□□ -0.31
PHGDH-201ENST00000369407 ARFGEF1Q9Y6D6 1849 aa13.11□□□□□ -0.31
PHGDH-201ENST00000369407 CYP3A7-CYP3A51PA0A087WV96 503 aa13.11□□□□□ -0.31
PHGDH-201ENST00000369407 ATF2P15336 505 aa13.11□□□□□ -0.31
PHGDH-201ENST00000369407 CYP3A7P24462 503 aa13.11□□□□□ -0.31
PHGDH-201ENST00000369407 SSTR3P32745 418 aaPredicted RBP13.11□□□□□ -0.31
PHGDH-201ENST00000369407 TCP10Q12799 353 aa13.11□□□□□ -0.31
PHGDH-201ENST00000369407 MTM1Q13496 603 aa13.11□□□□□ -0.31
PHGDH-201ENST00000369407 CYP1B1Q16678 543 aa13.11□□□□□ -0.31
PHGDH-201ENST00000369407 TMEM154Q6P9G4 183 aa13.11□□□□□ -0.31
PHGDH-201ENST00000369407 RHBDF2Q6PJF5 856 aa13.11□□□□□ -0.31
PHGDH-201ENST00000369407 DHX38Q92620 1227 aaKnown RBP13.11□□□□□ -0.31
PHGDH-201ENST00000369407 SNF8Q96H20 258 aa13.11□□□□□ -0.31
PHGDH-201ENST00000369407 DENND2DQ9H6A0 471 aaPredicted RBP13.11□□□□□ -0.31
PHGDH-201ENST00000369407 TXLNGQ9NUQ3 528 aa13.11□□□□□ -0.31
PHGDH-201ENST00000369407 DDX39AO00148 427 aaKnown RBP13.1□□□□□ -0.31
PHGDH-201ENST00000369407 SLITRK3O94933 977 aa13.1□□□□□ -0.31
PHGDH-201ENST00000369407 LUC7L3O95232 432 aaKnown RBP13.1□□□□□ -0.31
PHGDH-201ENST00000369407 T-ENOLP0DO92 83 aa13.1□□□□□ -0.31
PHGDH-201ENST00000369407 IVDP26440 423 aa13.1□□□□□ -0.31
PHGDH-201ENST00000369407 ATP5DP30049 168 aa13.1□□□□□ -0.31
PHGDH-201ENST00000369407 RFC5P40937 340 aa13.1□□□□□ -0.31
PHGDH-201ENST00000369407 POLGP54098 1239 aaPredicted RBP13.1□□□□□ -0.31
PHGDH-201ENST00000369407 STRN3Q13033 797 aa13.1□□□□□ -0.31
PHGDH-201ENST00000369407 GPATCH4Q5T3I0 446 aaKnown RBP13.1□□□□□ -0.31
PHGDH-201ENST00000369407 RNF220Q5VTB9 566 aa13.1□□□□□ -0.31
PHGDH-201ENST00000369407 RFX8Q6ZV50 586 aa13.1□□□□□ -0.31
PHGDH-201ENST00000369407 C1orf186Q6ZWK4 172 aa13.1□□□□□ -0.31
PHGDH-201ENST00000369407 STK32AQ8WU08 396 aa13.1□□□□□ -0.31
PHGDH-201ENST00000369407 FIZ1Q96SL8 496 aa13.1□□□□□ -0.31
PHGDH-201ENST00000369407 TSC22D3Q99576 134 aa13.1□□□□□ -0.31
PHGDH-201ENST00000369407 CBWD1Q9BRT8 395 aa13.1□□□□□ -0.31
PHGDH-201ENST00000369407 OLFML3Q9NRN5 406 aa13.1□□□□□ -0.31
PHGDH-201ENST00000369407 CYP39A1Q9NYL5 469 aa13.1□□□□□ -0.31
PHGDH-201ENST00000369407 NUMBLQ9Y6R0 609 aa13.1□□□□□ -0.31
PHGDH-201ENST00000369407 ATP8B3O60423 1300 aa13.1□□□□□ -0.31
PHGDH-201ENST00000369407 EEF2P13639 858 aaKnown RBP13.1□□□□□ -0.31
PHGDH-201ENST00000369407 PECAM1P16284 738 aaPredicted RBP13.1□□□□□ -0.31
PHGDH-201ENST00000369407 APBB1IPQ7Z5R6 666 aaPredicted RBP13.1□□□□□ -0.31
PHGDH-201ENST00000369407 TRIM74Q86UV6 250 aa13.1□□□□□ -0.31
PHGDH-201ENST00000369407 TRIM73Q86UV7 250 aa13.1□□□□□ -0.31
PHGDH-201ENST00000369407 EPS8L1Q8TE68 723 aa13.1□□□□□ -0.31
PHGDH-201ENST00000369407 SLC7A6OSQ96CW6 309 aaPredicted RBP13.1□□□□□ -0.31
PHGDH-201ENST00000369407 ALG13Q9NP73 1137 aaKnown RBP13.1□□□□□ -0.31
PHGDH-201ENST00000369407 DLGAP2Q9P1A6 1054 aa13.1□□□□□ -0.31
PHGDH-201ENST00000369407 DCTN4Q9UJW0 460 aa13.1□□□□□ -0.31
PHGDH-201ENST00000369407 LAMB2P55268 1798 aa13.1□□□□□ -0.31
PHGDH-201ENST00000369407 C6orf229H3BNL8 230 aa13.1□□□□□ -0.31
PHGDH-201ENST00000369407 IL9RQ01113 521 aa13.1□□□□□ -0.31
PHGDH-201ENST00000369407 NFIAQ12857 509 aa13.1□□□□□ -0.31
PHGDH-201ENST00000369407 OVGP1Q12889 678 aa13.1□□□□□ -0.31
PHGDH-201ENST00000369407 TRAF1Q13077 416 aa13.1□□□□□ -0.31
PHGDH-201ENST00000369407 GRAPQ13588 217 aa13.1□□□□□ -0.31
PHGDH-201ENST00000369407 TAF1BQ53T94 588 aaPredicted RBP13.1□□□□□ -0.31
PHGDH-201ENST00000369407 SLFN13Q68D06 897 aa13.1□□□□□ -0.31
PHGDH-201ENST00000369407 GRAPLQ8TC17 118 aaPredicted RBP13.1□□□□□ -0.31
PHGDH-201ENST00000369407 PPP1R12CQ9BZL4 782 aa13.1□□□□□ -0.31
PHGDH-201ENST00000369407 KLHL11Q9NVR0 708 aa13.1□□□□□ -0.31
PHGDH-201ENST00000369407 PLEKHO2Q8TD55 490 aa13.09□□□□□ -0.31
PHGDH-201ENST00000369407 PSPC1Q8WXF1 523 aaKnown RBP13.09□□□□□ -0.31
PHGDH-201ENST00000369407 CCDC127Q96BQ5 260 aa13.09□□□□□ -0.31
PHGDH-201ENST00000369407 NAP1L4Q99733 375 aaKnown RBP13.09□□□□□ -0.31
PHGDH-201ENST00000369407 LRRC19Q9H756 370 aa13.09□□□□□ -0.31
PHGDH-201ENST00000369407 WHRNQ9P202 907 aa13.09□□□□□ -0.31
PHGDH-201ENST00000369407 ANAPC7Q9UJX3 599 aa13.09□□□□□ -0.31
PHGDH-201ENST00000369407 A0A1B0GVG6 124 aa13.09□□□□□ -0.31
PHGDH-201ENST00000369407 FAM47DPA6NHR8 397 aa13.09□□□□□ -0.31
PHGDH-201ENST00000369407 GGPS1O95749 300 aa13.09□□□□□ -0.31
PHGDH-201ENST00000369407 FGFR1P11362 822 aa13.09□□□□□ -0.31
PHGDH-201ENST00000369407 BMP3P12645 472 aa13.09□□□□□ -0.31
PHGDH-201ENST00000369407 KRT15P19012 456 aa13.09□□□□□ -0.31
PHGDH-201ENST00000369407 ITIH2P19823 946 aa13.09□□□□□ -0.31
PHGDH-201ENST00000369407 RPA3P35244 121 aaPredicted RBP13.09□□□□□ -0.31
PHGDH-201ENST00000369407 FASTKD3Q14CZ7 662 aaKnown RBP13.09□□□□□ -0.31
PHGDH-201ENST00000369407 CLUL1Q15846 466 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms