RNA–Protein interactions for RNA: ENST00000368841.6

SNX27-202, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best)

Gene SNX27, Length 7,070 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-202ENST00000368841 LIFRP42702 1097 aa19.17■□□□□ 0.66
SNX27-202ENST00000368841 GUCY1A3Q02108 690 aa19.17■□□□□ 0.66
SNX27-202ENST00000368841 FAM49BQ9NUQ9 324 aa19.17■□□□□ 0.66
SNX27-202ENST00000368841 PARVAQ9NVD7 372 aa19.17■□□□□ 0.66
SNX27-202ENST00000368841 TRIM10Q9UDY6 481 aa19.17■□□□□ 0.66
SNX27-202ENST00000368841 SUPT3HB4E1H0 165 aa19.17■□□□□ 0.66
SNX27-202ENST00000368841 HMOX2P30519 316 aa19.17■□□□□ 0.66
SNX27-202ENST00000368841 ARL4DP49703 201 aa19.17■□□□□ 0.66
SNX27-202ENST00000368841 AP2B1P63010 937 aa19.17■□□□□ 0.66
SNX27-202ENST00000368841 PABPC5Q96DU9 382 aaKnown RBP19.17■□□□□ 0.66
SNX27-202ENST00000368841 APOL5Q9BWW9 433 aa19.17■□□□□ 0.66
SNX27-202ENST00000368841 ACAD9Q9H845 621 aa19.17■□□□□ 0.66
SNX27-202ENST00000368841 SOAT1P35610 550 aa19.17■□□□□ 0.66
SNX27-202ENST00000368841 SNX9Q9Y5X1 595 aa19.17■□□□□ 0.66
SNX27-202ENST00000368841 ADCY3O60266 1144 aa19.16■□□□□ 0.66
SNX27-202ENST00000368841 TBXAS1P24557 533 aaPredicted RBP19.16■□□□□ 0.66
SNX27-202ENST00000368841 RAD23BP54727 409 aa19.16■□□□□ 0.66
SNX27-202ENST00000368841 NOP53Q9NZM5 478 aaKnown RBP19.16■□□□□ 0.66
SNX27-202ENST00000368841 USP6P35125 1406 aa19.16■□□□□ 0.66
SNX27-202ENST00000368841 EFCAB6Q5THR3 1501 aa19.16■□□□□ 0.66
SNX27-202ENST00000368841 AVPR1AP37288 418 aa19.16■□□□□ 0.66
SNX27-202ENST00000368841 SHCBP1LQ9BZQ2 653 aa19.16■□□□□ 0.66
SNX27-202ENST00000368841 DIS3Q9Y2L1 958 aaKnown RBP19.16■□□□□ 0.66
SNX27-202ENST00000368841 RPS6P62753 249 aaKnown RBP19.16■□□□□ 0.66
SNX27-202ENST00000368841 VEPH1Q14D04 833 aa19.16■□□□□ 0.66
SNX27-202ENST00000368841 P3H1Q32P28 736 aa19.16■□□□□ 0.66
SNX27-202ENST00000368841 TTC13Q8NBP0 860 aa19.16■□□□□ 0.66
SNX27-202ENST00000368841 KLK7P49862 253 aa19.16■□□□□ 0.66
SNX27-202ENST00000368841 TBL3Q12788 808 aaKnown RBP19.16■□□□□ 0.66
SNX27-202ENST00000368841 ORC1Q13415 861 aa19.16■□□□□ 0.66
SNX27-202ENST00000368841 MYO5CQ9NQX4 1742 aa19.16■□□□□ 0.66
SNX27-202ENST00000368841 KRT76Q01546 638 aa19.16■□□□□ 0.66
SNX27-202ENST00000368841 CDKL3Q8IVW4 592 aaPredicted RBP19.16■□□□□ 0.66
SNX27-202ENST00000368841 CYGBQ8WWM9 190 aa19.16■□□□□ 0.66
SNX27-202ENST00000368841 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.16■□□□□ 0.66
SNX27-202ENST00000368841 PLIN5Q00G26 463 aa19.15■□□□□ 0.66
SNX27-202ENST00000368841 BTKQ06187 659 aa19.15■□□□□ 0.66
SNX27-202ENST00000368841 OSBPL3Q9H4L5 887 aa19.15■□□□□ 0.66
SNX27-202ENST00000368841 ZC4H2Q9NQZ6 224 aa19.15■□□□□ 0.66
SNX27-202ENST00000368841 BARHL2Q9NY43 387 aa19.15■□□□□ 0.66
SNX27-202ENST00000368841 TNPO2O14787 897 aaKnown RBP19.15■□□□□ 0.66
SNX27-202ENST00000368841 KRT39Q6A163 491 aa19.15■□□□□ 0.66
SNX27-202ENST00000368841 L3MBTL3Q96JM7 780 aaPredicted RBP19.15■□□□□ 0.66
SNX27-202ENST00000368841 MAP3K20Q9NYL2 800 aaKnown RBP19.15■□□□□ 0.66
SNX27-202ENST00000368841 TCP11X1B4DZS4 312 aa19.15■□□□□ 0.66
SNX27-202ENST00000368841 BTNL9Q6UXG8 535 aa19.15■□□□□ 0.66
SNX27-202ENST00000368841 CCDC151A5D8V7 595 aa19.15■□□□□ 0.66
SNX27-202ENST00000368841 APRTP07741 180 aa19.15■□□□□ 0.66
SNX27-202ENST00000368841 WDR72Q3MJ13 1102 aa19.15■□□□□ 0.66
SNX27-202ENST00000368841 MGAT5BQ3V5L5 792 aa19.15■□□□□ 0.66
SNX27-202ENST00000368841 NLRP14Q86W24 1093 aa19.15■□□□□ 0.66
SNX27-202ENST00000368841 APPL2Q8NEU8 664 aa19.15■□□□□ 0.66
SNX27-202ENST00000368841 C2orf40Q9H1Z8 148 aa19.15■□□□□ 0.66
SNX27-202ENST00000368841 ZCCHC17Q9NP64 241 aaKnown RBP19.15■□□□□ 0.66
SNX27-202ENST00000368841 ZBTB12Q9Y330 459 aaPredicted RBP19.15■□□□□ 0.66
SNX27-202ENST00000368841 AGRPO00253 132 aa19.15■□□□□ 0.66
SNX27-202ENST00000368841 PRRG1O14668 218 aa19.15■□□□□ 0.66
SNX27-202ENST00000368841 NBPF20Q3BBV1 942 aa19.15■□□□□ 0.66
SNX27-202ENST00000368841 MFSD4BQ5TF39 518 aa19.15■□□□□ 0.66
SNX27-202ENST00000368841 NBPF10Q6P3W6 841 aaKnown RBP19.15■□□□□ 0.66
SNX27-202ENST00000368841 TMEM117Q9H0C3 514 aa19.15■□□□□ 0.66
SNX27-202ENST00000368841 PCMTD2Q9NV79 361 aa19.15■□□□□ 0.66
SNX27-202ENST00000368841 FAM205CA6NFA0 338 aa19.15■□□□□ 0.66
SNX27-202ENST00000368841 CYP2B6P20813 491 aa19.15■□□□□ 0.66
SNX27-202ENST00000368841 CUL4AQ13619 759 aa19.15■□□□□ 0.66
SNX27-202ENST00000368841 CYP4A22Q5TCH4 519 aa19.15■□□□□ 0.66
SNX27-202ENST00000368841 LDHDQ86WU2 507 aa19.15■□□□□ 0.66
SNX27-202ENST00000368841 APOBEC3FQ8IUX4 373 aaKnown RBP19.15■□□□□ 0.66
SNX27-202ENST00000368841 JPH1Q9HDC5 661 aaPredicted RBP19.15■□□□□ 0.66
SNX27-202ENST00000368841 TTC26A0AVF1 554 aa19.14■□□□□ 0.66
SNX27-202ENST00000368841 DYNC1LI2O43237 492 aaPredicted RBP19.14■□□□□ 0.66
SNX27-202ENST00000368841 GTF2H3Q13889 308 aa19.14■□□□□ 0.66
SNX27-202ENST00000368841 ANKS3Q6ZW76 656 aa19.14■□□□□ 0.66
SNX27-202ENST00000368841 XPO7Q9UIA9 1087 aaKnown RBP19.14■□□□□ 0.66
SNX27-202ENST00000368841 EPB42P16452 691 aa19.14■□□□□ 0.65
SNX27-202ENST00000368841 ITPRIPL1Q6GPH6 555 aa19.14■□□□□ 0.65
SNX27-202ENST00000368841 AGPAT1Q99943 283 aa19.14■□□□□ 0.65
SNX27-202ENST00000368841 CHGBP05060 677 aa19.14■□□□□ 0.65
SNX27-202ENST00000368841 LRRC71Q8N4P6 559 aa19.14■□□□□ 0.65
SNX27-202ENST00000368841 TRIM45Q9H8W5 580 aaPredicted RBP19.14■□□□□ 0.65
SNX27-202ENST00000368841 KIAA1586Q9HCI6 787 aa19.14■□□□□ 0.65
SNX27-202ENST00000368841 MAN1A2O60476 641 aa19.14■□□□□ 0.65
SNX27-202ENST00000368841 RFX3P48380 749 aa19.14■□□□□ 0.65
SNX27-202ENST00000368841 C1orf131Q8NDD1 294 aaKnown RBP19.14■□□□□ 0.65
SNX27-202ENST00000368841 PI4K2AQ9BTU6 479 aa19.14■□□□□ 0.65
SNX27-202ENST00000368841 TRIM54Q9BYV2 358 aa19.14■□□□□ 0.65
SNX27-202ENST00000368841 ETNK1Q9HBU6 452 aa19.14■□□□□ 0.65
SNX27-202ENST00000368841 EML4Q9HC35 981 aaKnown RBP19.14■□□□□ 0.65
SNX27-202ENST00000368841 ZNF229Q9UJW7 825 aa19.14■□□□□ 0.65
SNX27-202ENST00000368841 CDK17Q00537 523 aa19.14■□□□□ 0.65
SNX27-202ENST00000368841 PATL1Q86TB9 770 aaKnown RBP19.14■□□□□ 0.65
SNX27-202ENST00000368841 RHOT1Q8IXI2 618 aa19.14■□□□□ 0.65
SNX27-202ENST00000368841 CD274Q9NZQ7 290 aa19.14■□□□□ 0.65
SNX27-202ENST00000368841 H7C1W4 665 aa19.13■□□□□ 0.65
SNX27-202ENST00000368841 RPS6KA4O75676 772 aa19.13■□□□□ 0.65
SNX27-202ENST00000368841 ENO3P13929 434 aaPredicted RBP19.13■□□□□ 0.65
SNX27-202ENST00000368841 DDX56Q9NY93 547 aaKnown RBP19.13■□□□□ 0.65
SNX27-202ENST00000368841 IFNEQ86WN2 208 aa19.13■□□□□ 0.65
SNX27-202ENST00000368841 TWF1Q12792 350 aa19.13■□□□□ 0.65
SNX27-202ENST00000368841 MICALL2Q8IY33 904 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms