RNA–Protein interactions for RNA: ENST00000368838.1

SNX27-201, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best) BASIC

Gene SNX27, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-201ENST00000368838 CALUO43852 315 aaPredicted RBP9.6□□□□□ -0.87
SNX27-201ENST00000368838 HBP1O60381 514 aa9.6□□□□□ -0.87
SNX27-201ENST00000368838 MAFO75444 373 aaPredicted RBP9.6□□□□□ -0.87
SNX27-201ENST00000368838 PIGRP01833 764 aa9.6□□□□□ -0.87
SNX27-201ENST00000368838 SSBP05455 408 aaKnown RBP eCLIP9.6□□□□□ -0.87
SNX27-201ENST00000368838 LINC00271P0C7V0 271 aa9.6□□□□□ -0.87
SNX27-201ENST00000368838 ATP4AP20648 1035 aa9.6□□□□□ -0.87
SNX27-201ENST00000368838 HOXD13P35453 343 aa9.6□□□□□ -0.87
SNX27-201ENST00000368838 ABL2P42684 1182 aa9.6□□□□□ -0.87
SNX27-201ENST00000368838 COPB1P53618 953 aaKnown RBP9.6□□□□□ -0.87
SNX27-201ENST00000368838 SMTNP53814 917 aa9.6□□□□□ -0.87
SNX27-201ENST00000368838 DLX2Q07687 328 aaPredicted RBP9.6□□□□□ -0.87
SNX27-201ENST00000368838 KCNJ12Q14500 433 aa9.6□□□□□ -0.87
SNX27-201ENST00000368838 PPP2R5AQ15172 486 aa9.6□□□□□ -0.87
SNX27-201ENST00000368838 KRT31Q15323 416 aa9.6□□□□□ -0.87
SNX27-201ENST00000368838 TPD52L1Q16890 204 aaPredicted RBP9.6□□□□□ -0.87
SNX27-201ENST00000368838 TIGD5Q53EQ6 642 aa9.6□□□□□ -0.87
SNX27-201ENST00000368838 XKR9Q5GH70 373 aa9.6□□□□□ -0.87
SNX27-201ENST00000368838 SPECC1LQ69YQ0 1117 aa9.6□□□□□ -0.87
SNX27-201ENST00000368838 KLHL10Q6JEL2 608 aa9.6□□□□□ -0.87
SNX27-201ENST00000368838 TSHZ1Q6ZSZ6 1077 aa9.6□□□□□ -0.87
SNX27-201ENST00000368838 FRMD5Q7Z6J6 570 aa9.6□□□□□ -0.87
SNX27-201ENST00000368838 RSPH3Q86UC2 560 aa9.6□□□□□ -0.87
SNX27-201ENST00000368838 ZSCAN30Q86W11 494 aa9.6□□□□□ -0.87
SNX27-201ENST00000368838 SFR1Q86XK3 245 aa9.6□□□□□ -0.87
SNX27-201ENST00000368838 FAM178BQ8IXR5 827 aa9.6□□□□□ -0.87
SNX27-201ENST00000368838 GJD3Q8N144 294 aa9.6□□□□□ -0.87
SNX27-201ENST00000368838 CCDC150Q8NCX0 1101 aa9.6□□□□□ -0.87
SNX27-201ENST00000368838 ATP8B4Q8TF62 1192 aa9.6□□□□□ -0.87
SNX27-201ENST00000368838 CCDC51Q96ER9 411 aa9.6□□□□□ -0.87
SNX27-201ENST00000368838 NAP1L5Q96NT1 182 aaPredicted RBP9.6□□□□□ -0.87
SNX27-201ENST00000368838 SAMD11Q96NU1 681 aa9.6□□□□□ -0.87
SNX27-201ENST00000368838 SRRTQ9BXP5 876 aaKnown RBP9.6□□□□□ -0.87
SNX27-201ENST00000368838 NSUN3Q9H649 340 aaKnown RBP9.6□□□□□ -0.87
SNX27-201ENST00000368838 AZI2Q9H6S1 392 aa9.6□□□□□ -0.87
SNX27-201ENST00000368838 INTS13Q9NVM9 706 aa9.6□□□□□ -0.87
SNX27-201ENST00000368838 TBC1D7Q9P0N9 293 aa9.6□□□□□ -0.87
SNX27-201ENST00000368838 MRPL42Q9Y6G3 142 aaKnown RBP9.6□□□□□ -0.87
SNX27-201ENST00000368838 TRIOO75962 3097 aa9.6□□□□□ -0.87
SNX27-201ENST00000368838 GTPBP10A4D1E9 387 aaKnown RBP9.59□□□□□ -0.87
SNX27-201ENST00000368838 BACH1O14867 736 aa9.59□□□□□ -0.87
SNX27-201ENST00000368838 ZBTB39O15060 712 aa9.59□□□□□ -0.87
SNX27-201ENST00000368838 CETN3O15182 167 aa9.59□□□□□ -0.87
SNX27-201ENST00000368838 HIP1RO75146 1068 aa9.59□□□□□ -0.87
SNX27-201ENST00000368838 ARL2P36404 184 aa9.59□□□□□ -0.87
SNX27-201ENST00000368838 BMPR1AP36894 532 aa9.59□□□□□ -0.87
SNX27-201ENST00000368838 NAMPTP43490 491 aa9.59□□□□□ -0.87
SNX27-201ENST00000368838 POU5F1Q01860 360 aaKnown RBP9.59□□□□□ -0.87
SNX27-201ENST00000368838 PRKCEQ02156 737 aa9.59□□□□□ -0.87
SNX27-201ENST00000368838 NFX1Q12986 1120 aaKnown RBP9.59□□□□□ -0.87
SNX27-201ENST00000368838 PAK2Q13177 524 aa9.59□□□□□ -0.87
SNX27-201ENST00000368838 MAN2A1Q16706 1144 aa9.59□□□□□ -0.87
SNX27-201ENST00000368838 ARSIQ5FYB1 569 aa9.59□□□□□ -0.87
SNX27-201ENST00000368838 TMEM31Q5JXX7 168 aa9.59□□□□□ -0.87
SNX27-201ENST00000368838 ODR4Q5SWX8 454 aa9.59□□□□□ -0.87
SNX27-201ENST00000368838 HS2ST1Q7LGA3 356 aa9.59□□□□□ -0.87
SNX27-201ENST00000368838 RPAINQ86UA6 219 aa9.59□□□□□ -0.87
SNX27-201ENST00000368838 MAP4K3Q8IVH8 894 aa9.59□□□□□ -0.87
SNX27-201ENST00000368838 TRIM59Q8IWR1 403 aa9.59□□□□□ -0.87
SNX27-201ENST00000368838 CCDC112Q8NEF3 446 aa9.59□□□□□ -0.87
SNX27-201ENST00000368838 BORCS6Q96GS4 357 aa9.59□□□□□ -0.87
SNX27-201ENST00000368838 CEP170P1Q96L14 293 aa9.59□□□□□ -0.87
SNX27-201ENST00000368838 NUP58Q9BVL2 599 aa9.59□□□□□ -0.87
SNX27-201ENST00000368838 NFKBIZQ9BYH8 718 aa9.59□□□□□ -0.87
SNX27-201ENST00000368838 GBP3Q9H0R5 595 aa9.59□□□□□ -0.87
SNX27-201ENST00000368838 TMEM134Q9H6X4 195 aa9.59□□□□□ -0.87
SNX27-201ENST00000368838 MRPL44Q9H9J2 332 aaKnown RBP9.59□□□□□ -0.87
SNX27-201ENST00000368838 RC3H2Q9HBD1 1191 aaKnown RBP9.59□□□□□ -0.87
SNX27-201ENST00000368838 ATP6V0A4Q9HBG4 840 aa9.59□□□□□ -0.87
SNX27-201ENST00000368838 XPNPEP1Q9NQW7 623 aa9.59□□□□□ -0.87
SNX27-201ENST00000368838 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.59□□□□□ -0.87
SNX27-201ENST00000368838 ARHGAP28Q9P2N2 729 aa9.59□□□□□ -0.87
SNX27-201ENST00000368838 MAGEC2Q9UBF1 373 aaPredicted RBP9.59□□□□□ -0.87
SNX27-201ENST00000368838 PADI3Q9ULW8 664 aa9.59□□□□□ -0.87
SNX27-201ENST00000368838 EXOC7Q9UPT5 735 aa9.59□□□□□ -0.87
SNX27-201ENST00000368838 PCDHGC5Q9Y5F6 944 aa9.59□□□□□ -0.87
SNX27-201ENST00000368838 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.59□□□□□ -0.87
SNX27-201ENST00000368838 TRPV2Q9Y5S1 764 aa9.59□□□□□ -0.87
SNX27-201ENST00000368838 RRN3P2A6NIE6 340 aa9.58□□□□□ -0.88
SNX27-201ENST00000368838 M0QZ92 97 aa9.58□□□□□ -0.88
SNX27-201ENST00000368838 MAGEB2O15479 319 aa9.58□□□□□ -0.88
SNX27-201ENST00000368838 ASAP2O43150 1006 aa9.58□□□□□ -0.88
SNX27-201ENST00000368838 TGFB1I1O43294 461 aa9.58□□□□□ -0.88
SNX27-201ENST00000368838 ZNF500O60304 480 aaPredicted RBP9.58□□□□□ -0.88
SNX27-201ENST00000368838 LILRB3O75022 631 aa9.58□□□□□ -0.88
SNX27-201ENST00000368838 DGKIO75912 1065 aa9.58□□□□□ -0.88
SNX27-201ENST00000368838 TPM2P07951 284 aa9.58□□□□□ -0.88
SNX27-201ENST00000368838 SFPQP23246 707 aaKnown RBP eCLIP9.58□□□□□ -0.88
SNX27-201ENST00000368838 DNAJB1P25685 340 aa9.58□□□□□ -0.88
SNX27-201ENST00000368838 LTBRP36941 435 aa9.58□□□□□ -0.88
SNX27-201ENST00000368838 STX17P56962 302 aa9.58□□□□□ -0.88
SNX27-201ENST00000368838 CDC42EP1Q00587 391 aa9.58□□□□□ -0.88
SNX27-201ENST00000368838 HYAL1Q12794 435 aa9.58□□□□□ -0.88
SNX27-201ENST00000368838 DMP1Q13316 513 aaPredicted RBP9.58□□□□□ -0.88
SNX27-201ENST00000368838 TUSC1Q2TAM9 212 aa9.58□□□□□ -0.88
SNX27-201ENST00000368838 ZNF484Q5JVG2 852 aa9.58□□□□□ -0.88
SNX27-201ENST00000368838 IER5Q5VY09 327 aa9.58□□□□□ -0.88
SNX27-201ENST00000368838 MTHFD1LQ6UB35 978 aa9.58□□□□□ -0.88
SNX27-201ENST00000368838 ADGRD2Q7Z7M1 963 aa9.58□□□□□ -0.88
SNX27-201ENST00000368838 LRRC8AQ8IWT6 810 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms