RNA–Protein interactions for RNA: ENST00000368226.8

PTPRK-207, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRK, Length 6,087 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-207ENST00000368226 GJB7Q6PEY0 223 aa13.65□□□□□ -0.22
PTPRK-207ENST00000368226 FRMD5Q7Z6J6 570 aa13.65□□□□□ -0.22
PTPRK-207ENST00000368226 CCDC138Q96M89 665 aa13.65□□□□□ -0.22
PTPRK-207ENST00000368226 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.65□□□□□ -0.221e-6■□□□□ 8.7
PTPRK-207ENST00000368226 IRX2Q9BZI1 471 aaPredicted RBP13.65□□□□□ -0.22
PTPRK-207ENST00000368226 AMACRQ9UHK6 382 aa13.65□□□□□ -0.22
PTPRK-207ENST00000368226 EIF3BP55884 814 aaKnown RBP13.65□□□□□ -0.22
PTPRK-207ENST00000368226 STK4Q13043 487 aa13.65□□□□□ -0.22
PTPRK-207ENST00000368226 KCNV1Q6PIU1 500 aa13.65□□□□□ -0.22
PTPRK-207ENST00000368226 GPRC5AQ8NFJ5 357 aa13.65□□□□□ -0.22
PTPRK-207ENST00000368226 RBM46Q8TBY0 533 aaKnown RBP13.65□□□□□ -0.22
PTPRK-207ENST00000368226 TNIP3Q96KP6 325 aa13.65□□□□□ -0.22
PTPRK-207ENST00000368226 BPIFA3Q9BQP9 254 aa13.65□□□□□ -0.22
PTPRK-207ENST00000368226 TMEM117Q9H0C3 514 aa13.65□□□□□ -0.22
PTPRK-207ENST00000368226 SMARCAL1Q9NZC9 954 aa13.65□□□□□ -0.22
PTPRK-207ENST00000368226 POLLQ9UGP5 575 aa13.65□□□□□ -0.22
PTPRK-207ENST00000368226 H0Y3Z8 333 aa13.64□□□□□ -0.23
PTPRK-207ENST00000368226 PRRG1O14668 218 aa13.64□□□□□ -0.23
PTPRK-207ENST00000368226 KRT38O76015 456 aa13.64□□□□□ -0.23
PTPRK-207ENST00000368226 ASMTLO95671 621 aa13.64□□□□□ -0.23
PTPRK-207ENST00000368226 SLC15A2Q16348 729 aa13.64□□□□□ -0.23
PTPRK-207ENST00000368226 FASTKD1Q53R41 847 aaKnown RBP13.64□□□□□ -0.23
PTPRK-207ENST00000368226 GNASQ5JWF2 1037 aa13.64□□□□□ -0.23
PTPRK-207ENST00000368226 TMED8Q6PL24 325 aaPredicted RBP13.64□□□□□ -0.23
PTPRK-207ENST00000368226 RFX8Q6ZV50 586 aa13.64□□□□□ -0.23
PTPRK-207ENST00000368226 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.64□□□□□ -0.23
PTPRK-207ENST00000368226 SUN2Q9UH99 717 aa13.64□□□□□ -0.23
PTPRK-207ENST00000368226 FARP1Q9Y4F1 1045 aaPredicted RBP13.64□□□□□ -0.23
PTPRK-207ENST00000368226 ADGRG1Q9Y653 693 aa13.64□□□□□ -0.23
PTPRK-207ENST00000368226 NEXMIFQ5QGS0 1516 aa13.64□□□□□ -0.23
PTPRK-207ENST00000368226 KDM6AO15550 1401 aaPredicted RBP13.64□□□□□ -0.23
PTPRK-207ENST00000368226 FDX1P10109 184 aa13.64□□□□□ -0.23
PTPRK-207ENST00000368226 ORC2Q13416 577 aaPredicted RBP13.64□□□□□ -0.23
PTPRK-207ENST00000368226 SBK1Q52WX2 424 aa13.64□□□□□ -0.23
PTPRK-207ENST00000368226 COL23A1Q86Y22 540 aaPredicted RBP13.64□□□□□ -0.23
PTPRK-207ENST00000368226 CLMNQ96JQ2 1002 aa13.64□□□□□ -0.23
PTPRK-207ENST00000368226 DYRK4Q9NR20 520 aa13.64□□□□□ -0.23
PTPRK-207ENST00000368226 AGPAT5Q9NUQ2 364 aa13.64□□□□□ -0.23
PTPRK-207ENST00000368226 CYP2C9P11712 490 aa13.64□□□□□ -0.23
PTPRK-207ENST00000368226 MAP2K2P36507 400 aa13.64□□□□□ -0.23
PTPRK-207ENST00000368226 FBXW4P57775 412 aa13.64□□□□□ -0.23
PTPRK-207ENST00000368226 COBLL1Q53SF7 1204 aa13.64□□□□□ -0.23
PTPRK-207ENST00000368226 FBXO33Q7Z6M2 555 aa13.64□□□□□ -0.23
PTPRK-207ENST00000368226 ACER1Q8TDN7 264 aa13.64□□□□□ -0.23
PTPRK-207ENST00000368226 ACSF2Q96CM8 615 aaPredicted RBP13.64□□□□□ -0.23
PTPRK-207ENST00000368226 MID2Q9UJV3 735 aa13.64□□□□□ -0.23
PTPRK-207ENST00000368226 MED14O60244 1454 aa13.64□□□□□ -0.23
PTPRK-207ENST00000368226 USP42Q9H9J4 1324 aaKnown RBP13.64□□□□□ -0.23
PTPRK-207ENST00000368226 UNC13BO14795 1591 aa13.64□□□□□ -0.23
PTPRK-207ENST00000368226 PRPF4O43172 522 aaKnown RBP eCLIP13.64□□□□□ -0.236e-7■□□□□ 9.8
PTPRK-207ENST00000368226 ERFP50548 548 aa13.64□□□□□ -0.23
PTPRK-207ENST00000368226 SMTNL2Q2TAL5 461 aa13.64□□□□□ -0.23
PTPRK-207ENST00000368226 SCG3Q8WXD2 468 aaKnown RBP13.64□□□□□ -0.23
PTPRK-207ENST00000368226 PRMT6Q96LA8 375 aaPredicted RBP13.64□□□□□ -0.23
PTPRK-207ENST00000368226 ZBTB18Q99592 522 aa13.64□□□□□ -0.23
PTPRK-207ENST00000368226 KCNH7Q9NS40 1196 aa13.64□□□□□ -0.23
PTPRK-207ENST00000368226 TXLNGQ9NUQ3 528 aa13.64□□□□□ -0.23
PTPRK-207ENST00000368226 PDXKO00764 312 aa13.64□□□□□ -0.23
PTPRK-207ENST00000368226 ITGA4P13612 1032 aa13.64□□□□□ -0.23
PTPRK-207ENST00000368226 SMARCA1P28370 1054 aa13.64□□□□□ -0.23
PTPRK-207ENST00000368226 TCF7P36402 384 aaPredicted RBP13.64□□□□□ -0.23
PTPRK-207ENST00000368226 VCPP55072 806 aaKnown RBP13.64□□□□□ -0.23
PTPRK-207ENST00000368226 ATF7IP2Q5U623 682 aa13.64□□□□□ -0.23
PTPRK-207ENST00000368226 HIBCHQ6NVY1 386 aaPredicted RBP13.64□□□□□ -0.23
PTPRK-207ENST00000368226 SYT2Q8N9I0 419 aaPredicted RBP13.64□□□□□ -0.23
PTPRK-207ENST00000368226 SLC35G2Q8TBE7 412 aa13.64□□□□□ -0.23
PTPRK-207ENST00000368226 XAB2Q9HCS7 855 aaKnown RBP13.64□□□□□ -0.23
PTPRK-207ENST00000368226 HMGB1P1B2RPK0 211 aaPredicted RBP13.63□□□□□ -0.23
PTPRK-207ENST00000368226 CTIFO43310 598 aaKnown RBP13.63□□□□□ -0.23
PTPRK-207ENST00000368226 MYBL1P10243 752 aa13.63□□□□□ -0.23
PTPRK-207ENST00000368226 SLC8A1P32418 973 aa13.63□□□□□ -0.23
PTPRK-207ENST00000368226 GCKP35557 465 aa13.63□□□□□ -0.23
PTPRK-207ENST00000368226 GRIN1Q05586 938 aa13.63□□□□□ -0.23
PTPRK-207ENST00000368226 CDKL3Q8IVW4 592 aaPredicted RBP13.63□□□□□ -0.23
PTPRK-207ENST00000368226 DDIASQ8IXT1 998 aa13.63□□□□□ -0.23
PTPRK-207ENST00000368226 PGBD3Q8N328 593 aa13.63□□□□□ -0.23
PTPRK-207ENST00000368226 L3MBTL3Q96JM7 780 aaPredicted RBP13.63□□□□□ -0.23
PTPRK-207ENST00000368226 MXRA8Q9BRK3 442 aa13.63□□□□□ -0.23
PTPRK-207ENST00000368226 MOV10L1Q9BXT6 1211 aaKnown RBP13.63□□□□□ -0.23
PTPRK-207ENST00000368226 PNPLA6Q8IY17 1366 aa13.63□□□□□ -0.23
PTPRK-207ENST00000368226 CNTNAP5Q8WYK1 1306 aa13.63□□□□□ -0.23
PTPRK-207ENST00000368226 DPYDQ12882 1025 aa13.63□□□□□ -0.23
PTPRK-207ENST00000368226 PDIA6Q15084 440 aa13.63□□□□□ -0.23
PTPRK-207ENST00000368226 GRAMD1BQ3KR37 738 aa13.63□□□□□ -0.23
PTPRK-207ENST00000368226 INTS5Q6P9B9 1019 aaKnown RBP13.63□□□□□ -0.23
PTPRK-207ENST00000368226 RBBP8NLQ8NC74 664 aaPredicted RBP13.63□□□□□ -0.23
PTPRK-207ENST00000368226 PABPC5Q96DU9 382 aaKnown RBP13.63□□□□□ -0.23
PTPRK-207ENST00000368226 SNF8Q96H20 258 aa13.63□□□□□ -0.23
PTPRK-207ENST00000368226 ZNF512Q96ME7 567 aaPredicted RBP13.63□□□□□ -0.23
PTPRK-207ENST00000368226 DDX56Q9NY93 547 aaKnown RBP13.63□□□□□ -0.23
PTPRK-207ENST00000368226 APEX2Q9UBZ4 518 aa13.63□□□□□ -0.23
PTPRK-207ENST00000368226 MAD2L2Q9UI95 211 aa13.63□□□□□ -0.23
PTPRK-207ENST00000368226 FHOD1Q9Y613 1164 aa13.63□□□□□ -0.23
PTPRK-207ENST00000368226 F8W8V4 182 aa13.63□□□□□ -0.23
PTPRK-207ENST00000368226 PNMA6AP0CW24 399 aaPredicted RBP13.63□□□□□ -0.23
PTPRK-207ENST00000368226 PDIA5Q14554 519 aa13.63□□□□□ -0.23
PTPRK-207ENST00000368226 CYP4A22Q5TCH4 519 aa13.63□□□□□ -0.23
PTPRK-207ENST00000368226 C18orf8Q96DM3 657 aa13.63□□□□□ -0.23
PTPRK-207ENST00000368226 WNT8AQ9H1J5 351 aa13.63□□□□□ -0.23
PTPRK-207ENST00000368226 DONSONQ9NYP3 566 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms