RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 PAAF1Q9BRP4 392 aa16.38■□□□□ 0.21
VAMP4-202ENST00000367740 TTPALQ9BTX7 342 aa16.38■□□□□ 0.21
VAMP4-202ENST00000367740 ZNF334Q9HCZ1 680 aaPredicted RBP16.38■□□□□ 0.21
VAMP4-202ENST00000367740 TRPV5Q9NQA5 729 aa16.38■□□□□ 0.21
VAMP4-202ENST00000367740 RBM12Q9NTZ6 932 aaKnown RBP16.38■□□□□ 0.21
VAMP4-202ENST00000367740 V9GY48 417 aaPredicted RBP16.38■□□□□ 0.21
VAMP4-202ENST00000367740 GAS7O60861 476 aa16.37■□□□□ 0.21
VAMP4-202ENST00000367740 TADA2AO75478 443 aa16.37■□□□□ 0.21
VAMP4-202ENST00000367740 RAP1GAPP47736 663 aa16.37■□□□□ 0.21
VAMP4-202ENST00000367740 HSP90AA2PQ14568 343 aaPredicted RBP16.37■□□□□ 0.21
VAMP4-202ENST00000367740 UVSSAQ2YD98 709 aa16.37■□□□□ 0.21
VAMP4-202ENST00000367740 WDR44Q5JSH3 913 aa16.37■□□□□ 0.21
VAMP4-202ENST00000367740 PLA2G4FQ68DD2 849 aa16.37■□□□□ 0.21
VAMP4-202ENST00000367740 ANO5Q75V66 913 aa16.37■□□□□ 0.21
VAMP4-202ENST00000367740 WDR5BQ86VZ2 330 aa16.37■□□□□ 0.21
VAMP4-202ENST00000367740 SLC5A5Q92911 643 aa16.37■□□□□ 0.21
VAMP4-202ENST00000367740 IRF7Q92985 503 aa16.37■□□□□ 0.21
VAMP4-202ENST00000367740 RIT2Q99578 217 aa16.37■□□□□ 0.21
VAMP4-202ENST00000367740 TRMT61BQ9BVS5 477 aaKnown RBP16.37■□□□□ 0.21
VAMP4-202ENST00000367740 APOL6Q9BWW8 343 aa16.37■□□□□ 0.21
VAMP4-202ENST00000367740 LRRC2Q9BYS8 371 aa16.37■□□□□ 0.21
VAMP4-202ENST00000367740 NXF3Q9H4D5 531 aaKnown RBP16.37■□□□□ 0.21
VAMP4-202ENST00000367740 GIT1Q9Y2X7 761 aa16.37■□□□□ 0.21
VAMP4-202ENST00000367740 ADAMTS20P59510 1910 aa16.37■□□□□ 0.21
VAMP4-202ENST00000367740 EDIL3O43854 480 aa16.36■□□□□ 0.21
VAMP4-202ENST00000367740 TSPAN1O60635 241 aa16.36■□□□□ 0.21
VAMP4-202ENST00000367740 SRGAP2CP0DJJ0 459 aa16.36■□□□□ 0.21
VAMP4-202ENST00000367740 CCNE1P24864 410 aa16.36■□□□□ 0.21
VAMP4-202ENST00000367740 GRIK3Q13003 919 aa16.36■□□□□ 0.21
VAMP4-202ENST00000367740 FAM78AQ5JUQ0 283 aa16.36■□□□□ 0.21
VAMP4-202ENST00000367740 FAM171A1Q5VUB5 890 aa16.36■□□□□ 0.21
VAMP4-202ENST00000367740 LRCH2Q5VUJ6 765 aa16.36■□□□□ 0.21
VAMP4-202ENST00000367740 RNF43Q68DV7 783 aa16.36■□□□□ 0.21
VAMP4-202ENST00000367740 VITQ6UXI7 678 aa16.36■□□□□ 0.21
VAMP4-202ENST00000367740 SGMS1Q86VZ5 419 aa16.36■□□□□ 0.21
VAMP4-202ENST00000367740 CEP57Q86XR8 500 aa16.36■□□□□ 0.21
VAMP4-202ENST00000367740 PRPF31Q8WWY3 499 aaKnown RBP16.36■□□□□ 0.21
VAMP4-202ENST00000367740 JPH2Q9BR39 696 aaPredicted RBP16.36■□□□□ 0.21
VAMP4-202ENST00000367740 TEKT3Q9BXF9 490 aa16.36■□□□□ 0.21
VAMP4-202ENST00000367740 ZFP14Q9HCL3 533 aa16.36■□□□□ 0.21
VAMP4-202ENST00000367740 AVENQ9NQS1 362 aaPredicted RBP16.36■□□□□ 0.21
VAMP4-202ENST00000367740 RBM28Q9NW13 759 aaKnown RBP16.36■□□□□ 0.21
VAMP4-202ENST00000367740 HELZ2Q9BYK8 2649 aaKnown RBP16.35■□□□□ 0.21
VAMP4-202ENST00000367740 DDX11L8A8MPP1 907 aa16.35■□□□□ 0.21
VAMP4-202ENST00000367740 ERLIN2O94905 339 aa16.35■□□□□ 0.21
VAMP4-202ENST00000367740 KIF4AO95239 1232 aa16.35■□□□□ 0.21
VAMP4-202ENST00000367740 GDI1P31150 447 aa16.35■□□□□ 0.21
VAMP4-202ENST00000367740 HOXA6P31267 233 aa16.35■□□□□ 0.21
VAMP4-202ENST00000367740 NUCB1Q02818 461 aa16.35■□□□□ 0.21
VAMP4-202ENST00000367740 LAMTOR4Q0VGL1 99 aa16.35■□□□□ 0.21
VAMP4-202ENST00000367740 RAB33AQ14088 237 aa16.35■□□□□ 0.21
VAMP4-202ENST00000367740 PRSS36Q5K4E3 855 aa16.35■□□□□ 0.21
VAMP4-202ENST00000367740 TCEAL6Q6IPX3 200 aa16.35■□□□□ 0.21
VAMP4-202ENST00000367740 APOA5Q6Q788 366 aa16.35■□□□□ 0.21
VAMP4-202ENST00000367740 MIER3Q7Z3K6 550 aa16.35■□□□□ 0.21
VAMP4-202ENST00000367740 REXO1Q8N1G1 1221 aaKnown RBP16.35■□□□□ 0.21
VAMP4-202ENST00000367740 RDM1Q8NG50 284 aa16.35■□□□□ 0.21
VAMP4-202ENST00000367740 TCEAL3Q969E4 200 aa16.35■□□□□ 0.21
VAMP4-202ENST00000367740 CCDC51Q96ER9 411 aa16.35■□□□□ 0.21
VAMP4-202ENST00000367740 CPB2Q96IY4 423 aa16.35■□□□□ 0.21
VAMP4-202ENST00000367740 SCNM1Q9BWG6 230 aa16.35■□□□□ 0.21
VAMP4-202ENST00000367740 RBM8AQ9Y5S9 174 aaKnown RBP16.35■□□□□ 0.21
VAMP4-202ENST00000367740 NCANO14594 1321 aa16.35■□□□□ 0.21
VAMP4-202ENST00000367740 ESYT2A0FGR8 921 aa16.34■□□□□ 0.21
VAMP4-202ENST00000367740 ARNTLO00327 626 aa16.34■□□□□ 0.21
VAMP4-202ENST00000367740 PSMD10O75832 226 aa16.34■□□□□ 0.21
VAMP4-202ENST00000367740 ZIC2O95409 532 aaPredicted RBP16.34■□□□□ 0.21
VAMP4-202ENST00000367740 GSPT1P15170 499 aaKnown RBP16.34■□□□□ 0.21
VAMP4-202ENST00000367740 AKAP5P24588 427 aa16.34■□□□□ 0.21
VAMP4-202ENST00000367740 MPLP40238 635 aa16.34■□□□□ 0.21
VAMP4-202ENST00000367740 LRRC32Q14392 662 aa16.34■□□□□ 0.21
VAMP4-202ENST00000367740 NOTUMQ6P988 496 aa16.34■□□□□ 0.21
VAMP4-202ENST00000367740 B3GNT9Q6UX72 402 aa16.34■□□□□ 0.21
VAMP4-202ENST00000367740 KBTBD6Q86V97 674 aa16.34■□□□□ 0.21
VAMP4-202ENST00000367740 GAB3Q8WWW8 586 aa16.34■□□□□ 0.21
VAMP4-202ENST00000367740 RUFY2Q8WXA3 655 aa16.34■□□□□ 0.21
VAMP4-202ENST00000367740 PSPC1Q8WXF1 523 aaKnown RBP16.34■□□□□ 0.21
VAMP4-202ENST00000367740 TMEM143Q96AN5 459 aa16.34■□□□□ 0.21
VAMP4-202ENST00000367740 TCEAL4Q96EI5 215 aa16.34■□□□□ 0.21
VAMP4-202ENST00000367740 ASB16Q96NS5 453 aa16.34■□□□□ 0.21
VAMP4-202ENST00000367740 ZMYND12Q9H0C1 365 aa16.34■□□□□ 0.21
VAMP4-202ENST00000367740 CSRNP2Q9H175 543 aa16.34■□□□□ 0.21
VAMP4-202ENST00000367740 ZMYM2Q9UBW7 1377 aa16.34■□□□□ 0.21
VAMP4-202ENST00000367740 MAST4O15021 2626 aa16.33■□□□□ 0.21
VAMP4-202ENST00000367740 PSMC3P17980 439 aa16.33■□□□□ 0.2
VAMP4-202ENST00000367740 CHMLP26374 656 aa16.33■□□□□ 0.2
VAMP4-202ENST00000367740 AXLP30530 894 aa16.33■□□□□ 0.2
VAMP4-202ENST00000367740 OR1D2P34982 312 aa16.33■□□□□ 0.2
VAMP4-202ENST00000367740 NPEPPSP55786 919 aa16.33■□□□□ 0.2
VAMP4-202ENST00000367740 RTL10Q7L3V2 364 aa16.33■□□□□ 0.2
VAMP4-202ENST00000367740 CACNA2D4Q7Z3S7 1137 aa16.33■□□□□ 0.2
VAMP4-202ENST00000367740 ZNF579Q8NAF0 562 aaKnown RBP16.33■□□□□ 0.2
VAMP4-202ENST00000367740 RNF149Q8NC42 400 aa16.33■□□□□ 0.2
VAMP4-202ENST00000367740 EDEM2Q9BV94 578 aa16.33■□□□□ 0.2
VAMP4-202ENST00000367740 KLK14Q9P0G3 267 aa16.33■□□□□ 0.2
VAMP4-202ENST00000367740 PCDHGA5Q9Y5G8 931 aa16.33■□□□□ 0.2
VAMP4-202ENST00000367740 KIF26AQ9ULI4 1882 aaPredicted RBP16.33■□□□□ 0.2
VAMP4-202ENST00000367740 CELSR3Q9NYQ7 3312 aa16.32■□□□□ 0.2
VAMP4-202ENST00000367740 CASTOR2A6NHX0 329 aa16.32■□□□□ 0.2
VAMP4-202ENST00000367740 SGSM2O43147 1006 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms