RNA–Protein interactions for RNA: ENST00000367196.3

CTSD-202, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 907 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-202ENST00000367196 MCTP1Q6DN14 999 aa16.3■□□□□ 0.2
CTSD-202ENST00000367196 ASTLQ6HA08 431 aaPredicted RBP16.3■□□□□ 0.2
CTSD-202ENST00000367196 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.3■□□□□ 0.2
CTSD-202ENST00000367196 GLYCTKQ8IVS8 523 aa16.3■□□□□ 0.2
CTSD-202ENST00000367196 HASPINQ8TF76 798 aa16.3■□□□□ 0.2
CTSD-202ENST00000367196 RABGGTAQ92696 567 aa16.3■□□□□ 0.2
CTSD-202ENST00000367196 PAAF1Q9BRP4 392 aa16.3■□□□□ 0.2
CTSD-202ENST00000367196 MRPL4Q9BYD3 311 aaKnown RBP16.3■□□□□ 0.2
CTSD-202ENST00000367196 TMEM134Q9H6X4 195 aa16.3■□□□□ 0.2
CTSD-202ENST00000367196 KMT5AQ9NQR1 393 aa16.3■□□□□ 0.2
CTSD-202ENST00000367196 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.3■□□□□ 0.2
CTSD-202ENST00000367196 EPS15L1Q9UBC2 864 aa16.3■□□□□ 0.2
CTSD-202ENST00000367196 FBXW11Q9UKB1 542 aa16.3■□□□□ 0.2
CTSD-202ENST00000367196 H3BQV1 296 aa16.29■□□□□ 0.2
CTSD-202ENST00000367196 ZMYND10O75800 440 aa16.29■□□□□ 0.2
CTSD-202ENST00000367196 PDGFBP01127 241 aaPredicted RBP16.29■□□□□ 0.2
CTSD-202ENST00000367196 HNRNPA1P09651 372 aaKnown RBP eCLIP16.29■□□□□ 0.2
CTSD-202ENST00000367196 SPATA31D3P0C874 917 aa16.29■□□□□ 0.2
CTSD-202ENST00000367196 RPL17P18621 184 aaKnown RBP16.29■□□□□ 0.2
CTSD-202ENST00000367196 NPTX2P47972 431 aa16.29■□□□□ 0.2
CTSD-202ENST00000367196 TOB1P50616 345 aaPredicted RBP16.29■□□□□ 0.2
CTSD-202ENST00000367196 PEX3P56589 373 aa16.29■□□□□ 0.2
CTSD-202ENST00000367196 EEF1DP3Q658K8 133 aa16.29■□□□□ 0.2
CTSD-202ENST00000367196 LILRA6Q6PI73 481 aa16.29■□□□□ 0.2
CTSD-202ENST00000367196 DCLRE1AQ6PJP8 1040 aa16.29■□□□□ 0.2
CTSD-202ENST00000367196 SPATA31D4Q6ZUB0 917 aa16.29■□□□□ 0.2
CTSD-202ENST00000367196 ATOH1Q92858 354 aaPredicted RBP16.29■□□□□ 0.2
CTSD-202ENST00000367196 ZNF707Q96C28 371 aaPredicted RBP16.29■□□□□ 0.2
CTSD-202ENST00000367196 CDK5RAP3Q96JB5 506 aa16.29■□□□□ 0.2
CTSD-202ENST00000367196 SMOC2Q9H3U7 446 aa16.29■□□□□ 0.2
CTSD-202ENST00000367196 SLC38A7Q9NVC3 462 aa16.29■□□□□ 0.2
CTSD-202ENST00000367196 KCND2Q9NZV8 630 aa16.29■□□□□ 0.2
CTSD-202ENST00000367196 ZFP37Q9Y6Q3 630 aaPredicted RBP16.29■□□□□ 0.2
CTSD-202ENST00000367196 E9PMD0 336 aa16.28■□□□□ 0.2
CTSD-202ENST00000367196 HIP1RO75146 1068 aa16.28■□□□□ 0.2
CTSD-202ENST00000367196 XYLBO75191 536 aa16.28■□□□□ 0.2
CTSD-202ENST00000367196 B3GAT3O94766 335 aa16.28■□□□□ 0.2
CTSD-202ENST00000367196 EDN1P05305 212 aa16.28■□□□□ 0.2
CTSD-202ENST00000367196 HOXA9P31269 272 aa16.28■□□□□ 0.2
CTSD-202ENST00000367196 GRM5P41594 1212 aa16.28■□□□□ 0.2
CTSD-202ENST00000367196 MCM2P49736 904 aa16.28■□□□□ 0.2
CTSD-202ENST00000367196 SMTNP53814 917 aa16.28■□□□□ 0.2
CTSD-202ENST00000367196 STRN3Q13033 797 aa16.28■□□□□ 0.2
CTSD-202ENST00000367196 NAB2Q15742 525 aa16.28■□□□□ 0.2
CTSD-202ENST00000367196 NT5DC1Q5TFE4 455 aa16.28■□□□□ 0.2
CTSD-202ENST00000367196 PRSS55Q6UWB4 352 aaPredicted RBP16.28■□□□□ 0.2
CTSD-202ENST00000367196 RTL10Q7L3V2 364 aa16.28■□□□□ 0.2
CTSD-202ENST00000367196 DDX27Q96GQ7 796 aaKnown RBP16.28■□□□□ 0.2
CTSD-202ENST00000367196 PPP1R10Q96QC0 940 aaKnown RBP16.28■□□□□ 0.2
CTSD-202ENST00000367196 ARHGAP28Q9P2N2 729 aa16.28■□□□□ 0.2
CTSD-202ENST00000367196 CACNG4Q9UBN1 327 aa16.28■□□□□ 0.2
CTSD-202ENST00000367196 DOCK8Q8NF50 2099 aa16.27■□□□□ 0.2
CTSD-202ENST00000367196 MYBP10242 640 aa16.27■□□□□ 0.2
CTSD-202ENST00000367196 MCF2P10911 925 aa16.27■□□□□ 0.2
CTSD-202ENST00000367196 RFX1P22670 979 aa16.27■□□□□ 0.2
CTSD-202ENST00000367196 GUCY2CP25092 1073 aa16.27■□□□□ 0.2
CTSD-202ENST00000367196 ATP2C1P98194 919 aaPredicted RBP16.27■□□□□ 0.2
CTSD-202ENST00000367196 PPM1LQ5SGD2 360 aa16.27■□□□□ 0.2
CTSD-202ENST00000367196 ARL6IP4Q66PJ3 421 aaKnown RBP16.27■□□□□ 0.2
CTSD-202ENST00000367196 RINT1Q6NUQ1 792 aa16.27■□□□□ 0.2
CTSD-202ENST00000367196 ANKS3Q6ZW76 656 aa16.27■□□□□ 0.2
CTSD-202ENST00000367196 GET4Q7L5D6 327 aaPredicted RBP16.27■□□□□ 0.2
CTSD-202ENST00000367196 FLCNQ8NFG4 579 aa16.27■□□□□ 0.2
CTSD-202ENST00000367196 LNX1Q8TBB1 728 aaPredicted RBP16.27■□□□□ 0.2
CTSD-202ENST00000367196 FEZF2Q8TBJ5 459 aa16.27■□□□□ 0.2
CTSD-202ENST00000367196 ACO2Q99798 780 aaKnown RBP16.27■□□□□ 0.2
CTSD-202ENST00000367196 RTP3Q9BQQ7 232 aa16.27■□□□□ 0.2
CTSD-202ENST00000367196 CLSTN3Q9BQT9 956 aa16.27■□□□□ 0.2
CTSD-202ENST00000367196 TCHPQ9BT92 498 aa16.27■□□□□ 0.2
CTSD-202ENST00000367196 CDT1Q9H211 546 aa16.27■□□□□ 0.2
CTSD-202ENST00000367196 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.27■□□□□ 0.2
CTSD-202ENST00000367196 CITO14578 2027 aa16.27■□□□□ 0.2
CTSD-202ENST00000367196 MYH11P35749 1972 aa16.27■□□□□ 0.19
CTSD-202ENST00000367196 TRIP11Q15643 1979 aa16.26■□□□□ 0.19
CTSD-202ENST00000367196 VWA8A3KMH1 1905 aa16.26■□□□□ 0.19
CTSD-202ENST00000367196 PP2D1A8MPX8 630 aa16.26■□□□□ 0.19
CTSD-202ENST00000367196 H0YCG3 227 aa16.26■□□□□ 0.19
CTSD-202ENST00000367196 SLC26A4O43511 780 aa16.26■□□□□ 0.19
CTSD-202ENST00000367196 C8AP07357 584 aa16.26■□□□□ 0.19
CTSD-202ENST00000367196 POU2F2P09086 479 aa16.26■□□□□ 0.19
CTSD-202ENST00000367196 FGFR3P22607 806 aa16.26■□□□□ 0.19
CTSD-202ENST00000367196 FSHRP23945 695 aa16.26■□□□□ 0.19
CTSD-202ENST00000367196 ZRSR1Q15695 479 aaKnown RBP16.26■□□□□ 0.19
CTSD-202ENST00000367196 UPP1Q16831 310 aa16.26■□□□□ 0.19
CTSD-202ENST00000367196 UVSSAQ2YD98 709 aa16.26■□□□□ 0.19
CTSD-202ENST00000367196 GLRA4Q5JXX5 417 aa16.26■□□□□ 0.19
CTSD-202ENST00000367196 HYIQ5T013 277 aa16.26■□□□□ 0.19
CTSD-202ENST00000367196 MPZL3Q6UWV2 235 aa16.26■□□□□ 0.19
CTSD-202ENST00000367196 C1orf186Q6ZWK4 172 aa16.26■□□□□ 0.19
CTSD-202ENST00000367196 SIX5Q8N196 739 aa16.26■□□□□ 0.19
CTSD-202ENST00000367196 TMEM105Q8N8V8 129 aa16.26■□□□□ 0.19
CTSD-202ENST00000367196 SPIRE2Q8WWL2 714 aa16.26■□□□□ 0.19
CTSD-202ENST00000367196 ACAP3Q96P50 834 aa16.26■□□□□ 0.19
CTSD-202ENST00000367196 RUSC1Q9BVN2 902 aa16.26■□□□□ 0.19
CTSD-202ENST00000367196 WNT16Q9UBV4 365 aa16.26■□□□□ 0.19
CTSD-202ENST00000367196 USP20Q9Y2K6 914 aa16.26■□□□□ 0.19
CTSD-202ENST00000367196 SMIM28A0A1B0GU29 152 aa16.25■□□□□ 0.19
CTSD-202ENST00000367196 N4BP1O75113 896 aaKnown RBP16.25■□□□□ 0.19
CTSD-202ENST00000367196 SRFP11831 508 aa16.25■□□□□ 0.19
CTSD-202ENST00000367196 AOC1P19801 751 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms