RNA–Protein interactions for RNA: ENST00000367002.4

RD3-201, Transcript of retinal degeneration 3, GUCY2D regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RD3, Length 4,266 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RD3-201ENST00000367002 MSH4O15457 936 aa12.15□□□□□ -0.46
RD3-201ENST00000367002 FDX1P10109 184 aa12.15□□□□□ -0.46
RD3-201ENST00000367002 BMP6P22004 513 aa12.15□□□□□ -0.46
RD3-201ENST00000367002 KPNA2P52292 529 aaKnown RBP12.15□□□□□ -0.46
RD3-201ENST00000367002 DALRD3Q5D0E6 543 aaKnown RBP12.15□□□□□ -0.46
RD3-201ENST00000367002 PLA2G4FQ68DD2 849 aa12.15□□□□□ -0.46
RD3-201ENST00000367002 KRT80Q6KB66 452 aa12.15□□□□□ -0.46
RD3-201ENST00000367002 C4orf50Q6ZRC1 276 aa12.15□□□□□ -0.46
RD3-201ENST00000367002 TRPM8Q7Z2W7 1104 aa12.15□□□□□ -0.46
RD3-201ENST00000367002 RNF149Q8NC42 400 aa12.15□□□□□ -0.46
RD3-201ENST00000367002 ATP6V1E2Q96A05 226 aa12.15□□□□□ -0.46
RD3-201ENST00000367002 TMEM143Q96AN5 459 aa12.15□□□□□ -0.46
RD3-201ENST00000367002 C18orf8Q96DM3 657 aa12.15□□□□□ -0.46
RD3-201ENST00000367002 RIT2Q99578 217 aa12.15□□□□□ -0.46
RD3-201ENST00000367002 ACAD9Q9H845 621 aa12.15□□□□□ -0.46
RD3-201ENST00000367002 VCPKMTQ9H867 229 aa12.15□□□□□ -0.46
RD3-201ENST00000367002 NEU2Q9Y3R4 380 aa12.15□□□□□ -0.46
RD3-201ENST00000367002 F5H423 210 aaPredicted RBP12.14□□□□□ -0.47
RD3-201ENST00000367002 MX2P20592 715 aa12.14□□□□□ -0.47
RD3-201ENST00000367002 PHKA2P46019 1235 aa12.14□□□□□ -0.47
RD3-201ENST00000367002 ERFP50548 548 aa12.14□□□□□ -0.47
RD3-201ENST00000367002 XKR3Q5GH77 459 aa12.14□□□□□ -0.47
RD3-201ENST00000367002 SYDE1Q6ZW31 735 aaPredicted RBP12.14□□□□□ -0.47
RD3-201ENST00000367002 MYCBPAPQ8TBZ2 947 aa12.14□□□□□ -0.47
RD3-201ENST00000367002 VPS39Q96JC1 886 aa12.14□□□□□ -0.47
RD3-201ENST00000367002 PABPC3Q9H361 631 aaKnown RBP12.14□□□□□ -0.47
RD3-201ENST00000367002 BAG5Q9UL15 447 aa12.14□□□□□ -0.47
RD3-201ENST00000367002 INPP5FQ9Y2H2 1132 aa12.14□□□□□ -0.47
RD3-201ENST00000367002 MEGF6O75095 1541 aa12.14□□□□□ -0.47
RD3-201ENST00000367002 KDM6AO15550 1401 aaPredicted RBP12.14□□□□□ -0.47
RD3-201ENST00000367002 CCDC195A0A1B0GUA6 201 aa12.14□□□□□ -0.47
RD3-201ENST00000367002 GLI1P08151 1106 aa12.14□□□□□ -0.47
RD3-201ENST00000367002 EIF3EP60228 445 aaKnown RBP12.14□□□□□ -0.47
RD3-201ENST00000367002 ARL13BQ3SXY8 428 aa12.14□□□□□ -0.47
RD3-201ENST00000367002 HEATR6Q6AI08 1181 aaKnown RBP12.14□□□□□ -0.47
RD3-201ENST00000367002 RAB44Q7Z6P3 723 aaPredicted RBP12.14□□□□□ -0.47
RD3-201ENST00000367002 BBS5Q8N3I7 341 aa12.14□□□□□ -0.47
RD3-201ENST00000367002 RYBPQ8N488 228 aaPredicted RBP12.14□□□□□ -0.47
RD3-201ENST00000367002 SGSM3Q96HU1 749 aa12.14□□□□□ -0.47
RD3-201ENST00000367002 YIPF3Q9GZM5 350 aa12.14□□□□□ -0.47
RD3-201ENST00000367002 TOPORSQ9NS56 1045 aaPredicted RBP12.14□□□□□ -0.47
RD3-201ENST00000367002 PXDNQ92626 1479 aa12.14□□□□□ -0.47
RD3-201ENST00000367002 LRRC10BA6NIK2 292 aa12.14□□□□□ -0.47
RD3-201ENST00000367002 FOXP2O15409 715 aa12.14□□□□□ -0.47
RD3-201ENST00000367002 ENTPD3O75355 529 aa12.14□□□□□ -0.47
RD3-201ENST00000367002 SLC4A1P02730 911 aa12.14□□□□□ -0.47
RD3-201ENST00000367002 NR3C2P08235 984 aa12.14□□□□□ -0.47
RD3-201ENST00000367002 OCRLQ01968 901 aa12.14□□□□□ -0.47
RD3-201ENST00000367002 ROR1Q01973 937 aa12.14□□□□□ -0.47
RD3-201ENST00000367002 MAPK7Q13164 816 aa12.14□□□□□ -0.47
RD3-201ENST00000367002 TAF1BQ53T94 588 aaPredicted RBP12.14□□□□□ -0.47
RD3-201ENST00000367002 C1orf228Q6PIY5 440 aa12.14□□□□□ -0.47
RD3-201ENST00000367002 KIAA0895Q8NCT3 520 aa12.14□□□□□ -0.47
RD3-201ENST00000367002 SCFD1Q8WVM8 642 aa12.14□□□□□ -0.47
RD3-201ENST00000367002 SDCCAG3Q96C92 435 aa12.14□□□□□ -0.47
RD3-201ENST00000367002 TSC22D3Q99576 134 aa12.14□□□□□ -0.47
RD3-201ENST00000367002 LBHD1Q9BQE6 289 aaPredicted RBP12.14□□□□□ -0.47
RD3-201ENST00000367002 RUSC1Q9BVN2 902 aa12.14□□□□□ -0.47
RD3-201ENST00000367002 TIPINQ9BVW5 301 aa12.14□□□□□ -0.47
RD3-201ENST00000367002 C2orf40Q9H1Z8 148 aa12.14□□□□□ -0.47
RD3-201ENST00000367002 DHX35Q9H5Z1 703 aaKnown RBP12.14□□□□□ -0.47
RD3-201ENST00000367002 ATF5Q9Y2D1 282 aaPredicted RBP12.14□□□□□ -0.47
RD3-201ENST00000367002 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.14□□□□□ -0.47
RD3-201ENST00000367002 FAM47DPA6NHR8 397 aa12.14□□□□□ -0.47
RD3-201ENST00000367002 DIAPH2O60879 1101 aa12.14□□□□□ -0.47
RD3-201ENST00000367002 AKAP3O75969 853 aa12.14□□□□□ -0.47
RD3-201ENST00000367002 CHRNA5P30532 468 aa12.14□□□□□ -0.47
RD3-201ENST00000367002 CIITAP33076 1130 aa12.14□□□□□ -0.47
RD3-201ENST00000367002 NFIAQ12857 509 aa12.14□□□□□ -0.47
RD3-201ENST00000367002 NCOA4Q13772 614 aa12.14□□□□□ -0.47
RD3-201ENST00000367002 ANKRD20A4Q4UJ75 823 aa12.14□□□□□ -0.47
RD3-201ENST00000367002 ANKRD20A8PQ5CZ79 823 aa12.14□□□□□ -0.47
RD3-201ENST00000367002 ANKRD20A2Q5SQ80 823 aa12.14□□□□□ -0.47
RD3-201ENST00000367002 SYCP2LQ5T4T6 812 aa12.14□□□□□ -0.47
RD3-201ENST00000367002 TMCO4Q5TGY1 634 aa12.14□□□□□ -0.47
RD3-201ENST00000367002 ANKRD20A1Q5TYW2 823 aa12.14□□□□□ -0.47
RD3-201ENST00000367002 RFX8Q6ZV50 586 aa12.14□□□□□ -0.47
RD3-201ENST00000367002 RBBP8NLQ8NC74 664 aaPredicted RBP12.14□□□□□ -0.47
RD3-201ENST00000367002 FBXO25Q8TCJ0 367 aa12.14□□□□□ -0.47
RD3-201ENST00000367002 PI4K2AQ9BTU6 479 aa12.14□□□□□ -0.47
RD3-201ENST00000367002 POLR3CQ9BUI4 534 aaPredicted RBP12.14□□□□□ -0.47
RD3-201ENST00000367002 AP5M1Q9H0R1 490 aa12.14□□□□□ -0.47
RD3-201ENST00000367002 RPAP3Q9H6T3 665 aaPredicted RBP12.14□□□□□ -0.47
RD3-201ENST00000367002 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.14□□□□□ -0.47
RD3-201ENST00000367002 DEPDC5O75140 1603 aa12.13□□□□□ -0.47
RD3-201ENST00000367002 CCT8L1PA6NM43 557 aa12.13□□□□□ -0.47
RD3-201ENST00000367002 HMGCS2P54868 508 aa12.13□□□□□ -0.47
RD3-201ENST00000367002 ESRRGP62508 458 aa12.13□□□□□ -0.47
RD3-201ENST00000367002 METTL23Q86XA0 190 aa12.13□□□□□ -0.47
RD3-201ENST00000367002 DNAAF5Q86Y56 855 aa12.13□□□□□ -0.47
RD3-201ENST00000367002 SLC13A5Q86YT5 568 aaPredicted RBP12.13□□□□□ -0.47
RD3-201ENST00000367002 RCOR2Q8IZ40 523 aa12.13□□□□□ -0.47
RD3-201ENST00000367002 HDAC7Q8WUI4 952 aa12.13□□□□□ -0.47
RD3-201ENST00000367002 BTBD6Q96KE9 485 aa12.13□□□□□ -0.47
RD3-201ENST00000367002 DUSP9Q99956 384 aaKnown RBP12.13□□□□□ -0.47
RD3-201ENST00000367002 KCNH7Q9NS40 1196 aa12.13□□□□□ -0.47
RD3-201ENST00000367002 BFARQ9NZS9 450 aa12.13□□□□□ -0.47
RD3-201ENST00000367002 SMG5Q9UPR3 1016 aaKnown RBP12.13□□□□□ -0.47
RD3-201ENST00000367002 SPATA31A1Q5TZJ5 1347 aa12.13□□□□□ -0.47
RD3-201ENST00000367002 FRMPD1Q5SYB0 1578 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms