RNA–Protein interactions for RNA: ENST00000366814.3

H3F3A-202, Transcript of H3 histone family member 3A, humanhuman

TSL 2 BASIC

Gene H3F3A, Length 1,863 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-202ENST00000366814 MFSD14AQ96MC6 490 aa11.75□□□□□ -0.53
H3F3A-202ENST00000366814 FBXL18Q96ME1 805 aa11.75□□□□□ -0.53
H3F3A-202ENST00000366814 OSBPL9Q96SU4 736 aa11.75□□□□□ -0.53
H3F3A-202ENST00000366814 JPH2Q9BR39 696 aaPredicted RBP11.75□□□□□ -0.53
H3F3A-202ENST00000366814 DDX41Q9UJV9 622 aaKnown RBP11.75□□□□□ -0.53
H3F3A-202ENST00000366814 AJAP1Q9UKB5 411 aaPredicted RBP11.75□□□□□ -0.53
H3F3A-202ENST00000366814 A0A0A6YYK5 440 aaPredicted RBP11.74□□□□□ -0.53
H3F3A-202ENST00000366814 ZNF233A6NK53 670 aa11.74□□□□□ -0.53
H3F3A-202ENST00000366814 K7ERI5 159 aa11.74□□□□□ -0.53
H3F3A-202ENST00000366814 SRGAP2O75044 1071 aa11.74□□□□□ -0.53
H3F3A-202ENST00000366814 LDHAP00338 332 aaKnown RBP11.74□□□□□ -0.53
H3F3A-202ENST00000366814 PGK1P00558 417 aa11.74□□□□□ -0.53
H3F3A-202ENST00000366814 ADSSP30520 456 aa11.74□□□□□ -0.53
H3F3A-202ENST00000366814 NOP2P46087 812 aaKnown RBP11.74□□□□□ -0.53
H3F3A-202ENST00000366814 MFAP3P55082 362 aa11.74□□□□□ -0.53
H3F3A-202ENST00000366814 CYP24A1Q07973 514 aa11.74□□□□□ -0.53
H3F3A-202ENST00000366814 PHLDB3Q6NSJ2 640 aa11.74□□□□□ -0.53
H3F3A-202ENST00000366814 EEPD1Q7L9B9 569 aa11.74□□□□□ -0.53
H3F3A-202ENST00000366814 RNF180Q86T96 592 aa11.74□□□□□ -0.53
H3F3A-202ENST00000366814 SYCE1Q8N0S2 351 aa11.74□□□□□ -0.53
H3F3A-202ENST00000366814 LMO3Q8TAP4 145 aa11.74□□□□□ -0.53
H3F3A-202ENST00000366814 PARD3BQ8TEW8 1205 aa11.74□□□□□ -0.53
H3F3A-202ENST00000366814 TAF4BQ92750 862 aa11.74□□□□□ -0.53
H3F3A-202ENST00000366814 TMEM117Q9H0C3 514 aa11.74□□□□□ -0.53
H3F3A-202ENST00000366814 USP20Q9Y2K6 914 aa11.74□□□□□ -0.53
H3F3A-202ENST00000366814 PCDHGC5Q9Y5F6 944 aa11.74□□□□□ -0.53
H3F3A-202ENST00000366814 MYH10P35580 1976 aa11.74□□□□□ -0.53
H3F3A-202ENST00000366814 ADGRA3Q8IWK6 1321 aa11.74□□□□□ -0.53
H3F3A-202ENST00000366814 EXTL3O43909 919 aa11.74□□□□□ -0.53
H3F3A-202ENST00000366814 PALMO75781 387 aa11.74□□□□□ -0.53
H3F3A-202ENST00000366814 RHOXF2BP0C7M4 288 aa11.74□□□□□ -0.53
H3F3A-202ENST00000366814 ZSCAN20P17040 1043 aaPredicted RBP11.74□□□□□ -0.53
H3F3A-202ENST00000366814 ATP4AP20648 1035 aa11.74□□□□□ -0.53
H3F3A-202ENST00000366814 ARL2P36404 184 aa11.74□□□□□ -0.53
H3F3A-202ENST00000366814 MATR3P43243 847 aaKnown RBP eCLIP11.74□□□□□ -0.53
H3F3A-202ENST00000366814 SLC26A2P50443 739 aa11.74□□□□□ -0.53
H3F3A-202ENST00000366814 ITIH3Q06033 890 aa11.74□□□□□ -0.53
H3F3A-202ENST00000366814 TTLL4Q14679 1199 aa11.74□□□□□ -0.53
H3F3A-202ENST00000366814 DHX37Q8IY37 1157 aaKnown RBP11.74□□□□□ -0.53
H3F3A-202ENST00000366814 FBXL13Q8NEE6 735 aa11.74□□□□□ -0.53
H3F3A-202ENST00000366814 CTNNBL1Q8WYA6 563 aaPredicted RBP11.74□□□□□ -0.53
H3F3A-202ENST00000366814 TMEM143Q96AN5 459 aa11.74□□□□□ -0.53
H3F3A-202ENST00000366814 CCDC127Q96BQ5 260 aa11.74□□□□□ -0.53
H3F3A-202ENST00000366814 LENG1Q96BZ8 264 aaPredicted RBP11.74□□□□□ -0.53
H3F3A-202ENST00000366814 NT5C1BQ96P26 610 aa11.74□□□□□ -0.53
H3F3A-202ENST00000366814 FNBP1Q96RU3 617 aa11.74□□□□□ -0.53
H3F3A-202ENST00000366814 MMS19Q96T76 1030 aa11.74□□□□□ -0.53
H3F3A-202ENST00000366814 RHOXF2Q9BQY4 288 aa11.74□□□□□ -0.53
H3F3A-202ENST00000366814 TMEM134Q9H6X4 195 aa11.74□□□□□ -0.53
H3F3A-202ENST00000366814 SEPT11Q9NVA2 429 aaKnown RBP11.74□□□□□ -0.53
H3F3A-202ENST00000366814 SALL4Q9UJQ4 1053 aa11.74□□□□□ -0.53
H3F3A-202ENST00000366814 TELO2Q9Y4R8 837 aa11.74□□□□□ -0.53
H3F3A-202ENST00000366814 LRRIQ3A6PVS8 624 aaPredicted RBP11.73□□□□□ -0.53
H3F3A-202ENST00000366814 LRRN2O75325 713 aa11.73□□□□□ -0.53
H3F3A-202ENST00000366814 MAFO75444 373 aaPredicted RBP11.73□□□□□ -0.53
H3F3A-202ENST00000366814 GLRA2P23416 452 aa11.73□□□□□ -0.53
H3F3A-202ENST00000366814 ADCYAP1R1P41586 468 aa11.73□□□□□ -0.53
H3F3A-202ENST00000366814 GPC3P51654 580 aa11.73□□□□□ -0.53
H3F3A-202ENST00000366814 EFNA5P52803 228 aa11.73□□□□□ -0.53
H3F3A-202ENST00000366814 LY6KQ17RY6 165 aa11.73□□□□□ -0.53
H3F3A-202ENST00000366814 LRRC26Q2I0M4 334 aa11.73□□□□□ -0.53
H3F3A-202ENST00000366814 CFAP221Q4G0U5 840 aa11.73□□□□□ -0.53
H3F3A-202ENST00000366814 CELF3Q5SZQ8 465 aaKnown RBP11.73□□□□□ -0.53
H3F3A-202ENST00000366814 C1orf220Q5T0J3 134 aa11.73□□□□□ -0.53
H3F3A-202ENST00000366814 CC2D1AQ6P1N0 951 aaPredicted RBP11.73□□□□□ -0.53
H3F3A-202ENST00000366814 SLC39A4Q6P5W5 647 aa11.73□□□□□ -0.53
H3F3A-202ENST00000366814 ENOSF1Q7L5Y1 443 aa11.73□□□□□ -0.53
H3F3A-202ENST00000366814 PLPPR4Q7Z2D5 763 aa11.73□□□□□ -0.53
H3F3A-202ENST00000366814 PPM1KQ8N3J5 372 aa11.73□□□□□ -0.53
H3F3A-202ENST00000366814 HNRNPLLQ8WVV9 542 aaKnown RBP11.73□□□□□ -0.53
H3F3A-202ENST00000366814 CALR3Q96L12 384 aaKnown RBP11.73□□□□□ -0.53
H3F3A-202ENST00000366814 FAM213AQ9BRX8 229 aa11.73□□□□□ -0.53
H3F3A-202ENST00000366814 PACSIN1Q9BY11 444 aa11.73□□□□□ -0.53
H3F3A-202ENST00000366814 ANKZF1Q9H8Y5 726 aa11.73□□□□□ -0.53
H3F3A-202ENST00000366814 RAB21Q9UL25 225 aa11.73□□□□□ -0.53
H3F3A-202ENST00000366814 ZMYND8Q9ULU4 1186 aaPredicted RBP11.73□□□□□ -0.53
H3F3A-202ENST00000366814 COLQQ9Y215 455 aaPredicted RBP11.73□□□□□ -0.53
H3F3A-202ENST00000366814 COQ4Q9Y3A0 265 aa11.73□□□□□ -0.53
H3F3A-202ENST00000366814 SIP14410 1827 aa11.72□□□□□ -0.53
H3F3A-202ENST00000366814 TARSL2A2RTX5 802 aaKnown RBP11.72□□□□□ -0.53
H3F3A-202ENST00000366814 DDX3XO00571 662 aaKnown RBP eCLIP11.72□□□□□ -0.534e-22■■■■□ 20.9
H3F3A-202ENST00000366814 ZC3H11AO75152 810 aaKnown RBP eCLIP11.72□□□□□ -0.53
H3F3A-202ENST00000366814 DUSP11O75319 330 aaKnown RBP11.72□□□□□ -0.53
H3F3A-202ENST00000366814 LGR5O75473 907 aa11.72□□□□□ -0.53
H3F3A-202ENST00000366814 PIGRP01833 764 aa11.72□□□□□ -0.53
H3F3A-202ENST00000366814 PNMA6AP0CW24 399 aaPredicted RBP11.72□□□□□ -0.53
H3F3A-202ENST00000366814 DLATP10515 647 aaKnown RBP11.72□□□□□ -0.53
H3F3A-202ENST00000366814 MXD4Q14582 209 aaPredicted RBP11.72□□□□□ -0.53
H3F3A-202ENST00000366814 TARBP2Q15633 366 aaKnown RBP11.72□□□□□ -0.53
H3F3A-202ENST00000366814 MAP9Q49MG5 647 aa11.72□□□□□ -0.53
H3F3A-202ENST00000366814 PPP1R15BQ5SWA1 713 aa11.72□□□□□ -0.53
H3F3A-202ENST00000366814 IER5Q5VY09 327 aa11.72□□□□□ -0.53
H3F3A-202ENST00000366814 NFRKBQ6P4R8 1299 aa11.72□□□□□ -0.53
H3F3A-202ENST00000366814 ZNF572Q7Z3I7 529 aaPredicted RBP11.72□□□□□ -0.53
H3F3A-202ENST00000366814 GLYCTKQ8IVS8 523 aa11.72□□□□□ -0.53
H3F3A-202ENST00000366814 KRT222Q8N1A0 295 aa11.72□□□□□ -0.53
H3F3A-202ENST00000366814 PLEKHO2Q8TD55 490 aa11.72□□□□□ -0.53
H3F3A-202ENST00000366814 MORC4Q8TE76 937 aa11.72□□□□□ -0.53
H3F3A-202ENST00000366814 SCFD2Q8WU76 684 aa11.72□□□□□ -0.53
H3F3A-202ENST00000366814 SPATA33Q96N06 139 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms