RNA–Protein interactions for RNA: ENST00000366769.7

CDC42BPA-205, Transcript of CDC42 binding protein kinase alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-205ENST00000366769 ZBTB46Q86UZ6 589 aa11.65□□□□□ -0.54
CDC42BPA-205ENST00000366769 KRT73Q86Y46 540 aa11.65□□□□□ -0.54
CDC42BPA-205ENST00000366769 C1orf54Q8WWF1 131 aa11.65□□□□□ -0.54
CDC42BPA-205ENST00000366769 LRRC59Q96AG4 307 aaKnown RBP11.65□□□□□ -0.54
CDC42BPA-205ENST00000366769 SLC13A1Q9BZW2 595 aa11.65□□□□□ -0.54
CDC42BPA-205ENST00000366769 CASS4Q9NQ75 786 aa11.65□□□□□ -0.54
CDC42BPA-205ENST00000366769 STMN3Q9NZ72 180 aa11.65□□□□□ -0.54
CDC42BPA-205ENST00000366769 TRPM2O94759 1503 aa11.65□□□□□ -0.54
CDC42BPA-205ENST00000366769 ADGRF5Q8IZF2 1346 aa11.65□□□□□ -0.54
CDC42BPA-205ENST00000366769 C1orf232A0A0U1RR37 186 aa11.65□□□□□ -0.54
CDC42BPA-205ENST00000366769 HNRNPDLO14979 420 aaKnown RBP11.65□□□□□ -0.54
CDC42BPA-205ENST00000366769 POLR2MP0CAP2 368 aa11.65□□□□□ -0.54
CDC42BPA-205ENST00000366769 ARL4AP40617 200 aa11.65□□□□□ -0.54
CDC42BPA-205ENST00000366769 KCNMA1Q12791 1236 aa11.65□□□□□ -0.54
CDC42BPA-205ENST00000366769 ADAM9Q13443 819 aa11.65□□□□□ -0.54
CDC42BPA-205ENST00000366769 MORF4L2Q15014 288 aa11.65□□□□□ -0.54
CDC42BPA-205ENST00000366769 LRRC49Q8IUZ0 686 aa11.65□□□□□ -0.54
CDC42BPA-205ENST00000366769 RIBC1Q8N443 379 aaPredicted RBP11.65□□□□□ -0.54
CDC42BPA-205ENST00000366769 ULK4Q96C45 1275 aa11.65□□□□□ -0.54
CDC42BPA-205ENST00000366769 PCDHB6Q9Y5E3 794 aa11.65□□□□□ -0.54
CDC42BPA-205ENST00000366769 DPPA5A6NC42 116 aa11.65□□□□□ -0.55
CDC42BPA-205ENST00000366769 MYBPC2Q14324 1141 aa11.65□□□□□ -0.55
CDC42BPA-205ENST00000366769 RBBP7Q16576 425 aa11.65□□□□□ -0.55
CDC42BPA-205ENST00000366769 FAM160B1Q5W0V3 765 aa11.65□□□□□ -0.55
CDC42BPA-205ENST00000366769 KRT26Q7Z3Y9 468 aa11.65□□□□□ -0.55
CDC42BPA-205ENST00000366769 CNDP1Q96KN2 507 aa11.65□□□□□ -0.55
CDC42BPA-205ENST00000366769 MAST3O60307 1309 aa11.65□□□□□ -0.55
CDC42BPA-205ENST00000366769 ADCY6O43306 1168 aa11.64□□□□□ -0.55
CDC42BPA-205ENST00000366769 CBX6O95503 412 aa11.64□□□□□ -0.55
CDC42BPA-205ENST00000366769 CDO1Q16878 200 aa11.64□□□□□ -0.55
CDC42BPA-205ENST00000366769 CENPUQ71F23 418 aa11.64□□□□□ -0.55
CDC42BPA-205ENST00000366769 ZFRQ96KR1 1074 aaKnown RBP11.64□□□□□ -0.55
CDC42BPA-205ENST00000366769 PHF12Q96QT6 1004 aa11.64□□□□□ -0.55
CDC42BPA-205ENST00000366769 LIMA1Q9UHB6 759 aaKnown RBP11.64□□□□□ -0.55
CDC42BPA-205ENST00000366769 FMNL1O95466 1100 aaPredicted RBP11.64□□□□□ -0.55
CDC42BPA-205ENST00000366769 RBBP8NLQ8NC74 664 aaPredicted RBP11.64□□□□□ -0.55
CDC42BPA-205ENST00000366769 RUBCNLQ9H714 662 aa11.64□□□□□ -0.55
CDC42BPA-205ENST00000366769 CCNL1Q9UK58 526 aaPredicted RBP11.64□□□□□ -0.55
CDC42BPA-205ENST00000366769 NUP214P35658 2090 aaPredicted RBP11.64□□□□□ -0.55
CDC42BPA-205ENST00000366769 REREQ9P2R6 1566 aa11.64□□□□□ -0.55
CDC42BPA-205ENST00000366769 RASGRP2Q7LDG7 609 aa11.64□□□□□ -0.55
CDC42BPA-205ENST00000366769 TCP10L2B9ZVM9 353 aa11.64□□□□□ -0.55
CDC42BPA-205ENST00000366769 SLC9A1P19634 815 aa11.64□□□□□ -0.55
CDC42BPA-205ENST00000366769 OSTNP61366 133 aa11.64□□□□□ -0.55
CDC42BPA-205ENST00000366769 DBNDD2Q9BQY9 259 aa11.64□□□□□ -0.55
CDC42BPA-205ENST00000366769 CDCA7Q9BWT1 371 aaPredicted RBP11.64□□□□□ -0.55
CDC42BPA-205ENST00000366769 CCDC134Q9H6E4 229 aa11.64□□□□□ -0.55
CDC42BPA-205ENST00000366769 ASCC3Q8N3C0 2202 aaKnown RBP11.64□□□□□ -0.55
CDC42BPA-205ENST00000366769 TPRP12270 2363 aaKnown RBP11.64□□□□□ -0.55
CDC42BPA-205ENST00000366769 PSMC6P62333 389 aa11.64□□□□□ -0.55
CDC42BPA-205ENST00000366769 EZH2Q15910 746 aaKnown RBP11.64□□□□□ -0.55
CDC42BPA-205ENST00000366769 IYDQ6PHW0 289 aa11.64□□□□□ -0.55
CDC42BPA-205ENST00000366769 IFNLR1Q8IU57 520 aaPredicted RBP11.64□□□□□ -0.55
CDC42BPA-205ENST00000366769 H0YCG3 227 aa11.64□□□□□ -0.55
CDC42BPA-205ENST00000366769 TCAIMQ8N3R3 496 aa11.64□□□□□ -0.55
CDC42BPA-205ENST00000366769 CCNYL1Q8N7R7 359 aa11.64□□□□□ -0.55
CDC42BPA-205ENST00000366769 STK32AQ8WU08 396 aa11.64□□□□□ -0.55
CDC42BPA-205ENST00000366769 SH3KBP1Q96B97 665 aa11.64□□□□□ -0.55
CDC42BPA-205ENST00000366769 SKA1Q96BD8 255 aa11.64□□□□□ -0.55
CDC42BPA-205ENST00000366769 IL1RL2Q9HB29 575 aa11.64□□□□□ -0.55
CDC42BPA-205ENST00000366769 RABGEF1Q9UJ41 708 aa11.64□□□□□ -0.55
CDC42BPA-205ENST00000366769 ATP8B3O60423 1300 aa11.64□□□□□ -0.55
CDC42BPA-205ENST00000366769 A1BGP04217 495 aa11.64□□□□□ -0.55
CDC42BPA-205ENST00000366769 KCNJ6P48051 423 aa11.64□□□□□ -0.55
CDC42BPA-205ENST00000366769 USP46P62068 366 aa11.64□□□□□ -0.55
CDC42BPA-205ENST00000366769 TSC22D1Q15714 1073 aa11.64□□□□□ -0.55
CDC42BPA-205ENST00000366769 AKIRIN2Q53H80 203 aa11.64□□□□□ -0.55
CDC42BPA-205ENST00000366769 ZNF658Q5TYW1 1059 aaPredicted RBP11.64□□□□□ -0.55
CDC42BPA-205ENST00000366769 BARGINQ6ZT62 677 aa11.64□□□□□ -0.55
CDC42BPA-205ENST00000366769 PHC3Q8NDX5 983 aa11.64□□□□□ -0.55
CDC42BPA-205ENST00000366769 AASDHPPTQ9NRN7 309 aa11.64□□□□□ -0.55
CDC42BPA-205ENST00000366769 STK39Q9UEW8 545 aa11.64□□□□□ -0.55
CDC42BPA-205ENST00000366769 TSPAN4O14817 238 aa11.64□□□□□ -0.55
CDC42BPA-205ENST00000366769 PRPSAP2O60256 369 aa11.64□□□□□ -0.55
CDC42BPA-205ENST00000366769 TBC1D4O60343 1298 aa11.64□□□□□ -0.55
CDC42BPA-205ENST00000366769 KRT6AP02538 564 aa11.64□□□□□ -0.55
CDC42BPA-205ENST00000366769 KRT6BP04259 564 aa11.64□□□□□ -0.55
CDC42BPA-205ENST00000366769 PSMC3P17980 439 aa11.64□□□□□ -0.55
CDC42BPA-205ENST00000366769 KRT6CP48668 564 aa11.64□□□□□ -0.55
CDC42BPA-205ENST00000366769 FMR1Q06787 632 aaKnown RBP eCLIP11.64□□□□□ -0.559e-7■■■□□ 17
CDC42BPA-205ENST00000366769 RRM2BQ7LG56 351 aa11.64□□□□□ -0.55
CDC42BPA-205ENST00000366769 TRAPPC11Q7Z392 1133 aa11.64□□□□□ -0.55
CDC42BPA-205ENST00000366769 DIS3LQ8TF46 1054 aaKnown RBP11.64□□□□□ -0.55
CDC42BPA-205ENST00000366769 XAGE2Q96GT9 111 aa11.64□□□□□ -0.55
CDC42BPA-205ENST00000366769 ZFYVE9O95405 1425 aa11.64□□□□□ -0.55
CDC42BPA-205ENST00000366769 DNAJC24Q6P3W2 148 aa11.64□□□□□ -0.55
CDC42BPA-205ENST00000366769 ATG14Q6ZNE5 492 aa11.64□□□□□ -0.55
CDC42BPA-205ENST00000366769 RBM44Q6ZP01 1051 aaKnown RBP11.64□□□□□ -0.55
CDC42BPA-205ENST00000366769 C11orf74Q86VG3 221 aa11.64□□□□□ -0.55
CDC42BPA-205ENST00000366769 ACAP3Q96P50 834 aa11.64□□□□□ -0.55
CDC42BPA-205ENST00000366769 PACSIN1Q9BY11 444 aa11.64□□□□□ -0.55
CDC42BPA-205ENST00000366769 TMEM191CA6NGB0 347 aa11.63□□□□□ -0.55
CDC42BPA-205ENST00000366769 PRLP01236 227 aa11.63□□□□□ -0.55
CDC42BPA-205ENST00000366769 SMARCA1P28370 1054 aa11.63□□□□□ -0.55
CDC42BPA-205ENST00000366769 SCNN1DP51172 638 aa11.63□□□□□ -0.55
CDC42BPA-205ENST00000366769 HEMGNQ9BXL5 484 aa11.63□□□□□ -0.55
CDC42BPA-205ENST00000366769 KLK7P49862 253 aa11.63□□□□□ -0.55
CDC42BPA-205ENST00000366769 ARL4CP56559 192 aa11.63□□□□□ -0.55
CDC42BPA-205ENST00000366769 TTC8Q8TAM2 541 aa11.63□□□□□ -0.55
CDC42BPA-205ENST00000366769 TAC1P20366 129 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms