RNA–Protein interactions for RNA: ENST00000366744.5

MRPL55-216, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MRPL55, Length 726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-216ENST00000366744 MRPL43Q8N983 215 aaKnown RBP10.19□□□□□ -0.78
MRPL55-216ENST00000366744 IQUBQ8NA54 791 aa10.19□□□□□ -0.78
MRPL55-216ENST00000366744 DDX12PQ92771 950 aa10.19□□□□□ -0.78
MRPL55-216ENST00000366744 SPATA32Q96LK8 384 aa10.19□□□□□ -0.78
MRPL55-216ENST00000366744 TNMDQ9H2S6 317 aa10.19□□□□□ -0.78
MRPL55-216ENST00000366744 ADAM28Q9UKQ2 775 aa10.19□□□□□ -0.78
MRPL55-216ENST00000366744 TBX20Q9UMR3 447 aa10.19□□□□□ -0.78
MRPL55-216ENST00000366744 USP20Q9Y2K6 914 aa10.19□□□□□ -0.78
MRPL55-216ENST00000366744 IRAK3Q9Y616 596 aa10.19□□□□□ -0.78
MRPL55-216ENST00000366744 C5orf42Q9H799 3197 aa10.19□□□□□ -0.78
MRPL55-216ENST00000366744 TRAPPC3O43617 180 aa10.18□□□□□ -0.78
MRPL55-216ENST00000366744 B4GALT3O60512 393 aa10.18□□□□□ -0.78
MRPL55-216ENST00000366744 BRD1O95696 1058 aa10.18□□□□□ -0.78
MRPL55-216ENST00000366744 BMP1P13497 986 aa10.18□□□□□ -0.78
MRPL55-216ENST00000366744 HOXB8P17481 243 aaPredicted RBP10.18□□□□□ -0.78
MRPL55-216ENST00000366744 KLRC2P26717 231 aa10.18□□□□□ -0.78
MRPL55-216ENST00000366744 DNM1Q05193 864 aaKnown RBP10.18□□□□□ -0.78
MRPL55-216ENST00000366744 COASYQ13057 564 aa10.18□□□□□ -0.78
MRPL55-216ENST00000366744 PTPN14Q15678 1187 aa10.18□□□□□ -0.78
MRPL55-216ENST00000366744 USP41Q3LFD5 358 aa10.18□□□□□ -0.78
MRPL55-216ENST00000366744 FUT10Q6P4F1 479 aa10.18□□□□□ -0.78
MRPL55-216ENST00000366744 SFR1Q86XK3 245 aa10.18□□□□□ -0.78
MRPL55-216ENST00000366744 CEP57L1Q8IYX8 460 aa10.18□□□□□ -0.78
MRPL55-216ENST00000366744 SMRP1Q8NCR6 262 aa10.18□□□□□ -0.78
MRPL55-216ENST00000366744 HASPINQ8TF76 798 aa10.18□□□□□ -0.78
MRPL55-216ENST00000366744 BCL7CQ8WUZ0 217 aaPredicted RBP10.18□□□□□ -0.78
MRPL55-216ENST00000366744 AUTS2Q8WXX7 1259 aa10.18□□□□□ -0.78
MRPL55-216ENST00000366744 DHX58Q96C10 678 aa10.18□□□□□ -0.78
MRPL55-216ENST00000366744 SNX27Q96L92 541 aa10.18□□□□□ -0.78
MRPL55-216ENST00000366744 MSTO1Q9BUK6 570 aa10.18□□□□□ -0.78
MRPL55-216ENST00000366744 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.18□□□□□ -0.78
MRPL55-216ENST00000366744 MARCH5Q9NX47 278 aa10.18□□□□□ -0.78
MRPL55-216ENST00000366744 PRKAG3Q9UGI9 489 aa10.18□□□□□ -0.78
MRPL55-216ENST00000366744 TSC2P49815 1807 aa10.17□□□□□ -0.78
MRPL55-216ENST00000366744 GRXCR2A6NFK2 248 aa10.17□□□□□ -0.78
MRPL55-216ENST00000366744 PTGESO14684 152 aa10.17□□□□□ -0.78
MRPL55-216ENST00000366744 KIF4AO95239 1232 aa10.17□□□□□ -0.78
MRPL55-216ENST00000366744 GCNT3O95395 438 aa10.17□□□□□ -0.78
MRPL55-216ENST00000366744 GLP2RO95838 553 aa10.17□□□□□ -0.78
MRPL55-216ENST00000366744 GLUD1P00367 558 aa10.17□□□□□ -0.78
MRPL55-216ENST00000366744 PIGRP01833 764 aa10.17□□□□□ -0.78
MRPL55-216ENST00000366744 CLTAP09496 248 aa10.17□□□□□ -0.78
MRPL55-216ENST00000366744 IL9P15248 144 aa10.17□□□□□ -0.78
MRPL55-216ENST00000366744 PROZP22891 400 aa10.17□□□□□ -0.78
MRPL55-216ENST00000366744 NMT1P30419 496 aaKnown RBP10.17□□□□□ -0.78
MRPL55-216ENST00000366744 ASIC1P78348 528 aa10.17□□□□□ -0.78
MRPL55-216ENST00000366744 MCL1Q07820 350 aa10.17□□□□□ -0.78
MRPL55-216ENST00000366744 PKP1Q13835 747 aa10.17□□□□□ -0.78
MRPL55-216ENST00000366744 HERC4Q5GLZ8 1057 aaPredicted RBP10.17□□□□□ -0.78
MRPL55-216ENST00000366744 SLFN12LQ6IEE8 588 aa10.17□□□□□ -0.78
MRPL55-216ENST00000366744 TAS1R3Q7RTX0 852 aa10.17□□□□□ -0.78
MRPL55-216ENST00000366744 MAP4K3Q8IVH8 894 aa10.17□□□□□ -0.78
MRPL55-216ENST00000366744 SYCP3Q8IZU3 236 aa10.17□□□□□ -0.78
MRPL55-216ENST00000366744 CEP120Q8N960 986 aa10.17□□□□□ -0.78
MRPL55-216ENST00000366744 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.17□□□□□ -0.78
MRPL55-216ENST00000366744 DDX27Q96GQ7 796 aaKnown RBP10.17□□□□□ -0.78
MRPL55-216ENST00000366744 CCDC34Q96HJ3 373 aa10.17□□□□□ -0.78
MRPL55-216ENST00000366744 PANK2Q9BZ23 570 aa10.17□□□□□ -0.78
MRPL55-216ENST00000366744 SCAND2PQ9GZW5 306 aaPredicted RBP10.17□□□□□ -0.78
MRPL55-216ENST00000366744 SFXN1Q9H9B4 322 aa10.17□□□□□ -0.78
MRPL55-216ENST00000366744 OLFML3Q9NRN5 406 aa10.17□□□□□ -0.78
MRPL55-216ENST00000366744 PANK4Q9NVE7 773 aa10.17□□□□□ -0.78
MRPL55-216ENST00000366744 NUB1Q9Y5A7 615 aa10.17□□□□□ -0.78
MRPL55-216ENST00000366744 HCFC2Q9Y5Z7 792 aa10.17□□□□□ -0.78
MRPL55-216ENST00000366744 MYMKA6NI61 221 aa10.16□□□□□ -0.78
MRPL55-216ENST00000366744 OGTO15294 1046 aa10.16□□□□□ -0.78
MRPL55-216ENST00000366744 MBTPS2O43462 519 aa10.16□□□□□ -0.78
MRPL55-216ENST00000366744 CLASP2O75122 1294 aaKnown RBP10.16□□□□□ -0.78
MRPL55-216ENST00000366744 B3GAT3O94766 335 aa10.16□□□□□ -0.78
MRPL55-216ENST00000366744 CXCL8P10145 99 aa10.16□□□□□ -0.78
MRPL55-216ENST00000366744 LTBRP36941 435 aa10.16□□□□□ -0.78
MRPL55-216ENST00000366744 GTF2BQ00403 316 aa10.16□□□□□ -0.78
MRPL55-216ENST00000366744 ITIH3Q06033 890 aa10.16□□□□□ -0.78
MRPL55-216ENST00000366744 DLX2Q07687 328 aaPredicted RBP10.16□□□□□ -0.78
MRPL55-216ENST00000366744 CBX2Q14781 532 aaPredicted RBP10.16□□□□□ -0.78
MRPL55-216ENST00000366744 POSTNQ15063 836 aa10.16□□□□□ -0.78
MRPL55-216ENST00000366744 SMAD2Q15796 467 aaKnown RBP10.16□□□□□ -0.78
MRPL55-216ENST00000366744 ADALQ6DHV7 355 aa10.16□□□□□ -0.78
MRPL55-216ENST00000366744 ANKRD54Q6NXT1 300 aa10.16□□□□□ -0.78
MRPL55-216ENST00000366744 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.16□□□□□ -0.78
MRPL55-216ENST00000366744 CEP57Q86XR8 500 aa10.16□□□□□ -0.78
MRPL55-216ENST00000366744 ADHFE1Q8IWW8 467 aa10.16□□□□□ -0.78
MRPL55-216ENST00000366744 GSTCDQ8NEC7 633 aa10.16□□□□□ -0.78
MRPL55-216ENST00000366744 LRRC15Q8TF66 581 aa10.16□□□□□ -0.78
MRPL55-216ENST00000366744 RIN2Q8WYP3 895 aaPredicted RBP10.16□□□□□ -0.78
MRPL55-216ENST00000366744 POMGNT1Q8WZA1 660 aa10.16□□□□□ -0.78
MRPL55-216ENST00000366744 KCNN1Q92952 543 aa10.16□□□□□ -0.78
MRPL55-216ENST00000366744 RIPOR3Q96MK2 946 aa10.16□□□□□ -0.78
MRPL55-216ENST00000366744 NECTIN4Q96NY8 510 aa10.16□□□□□ -0.78
MRPL55-216ENST00000366744 NECAB3Q96P71 396 aaPredicted RBP10.16□□□□□ -0.78
MRPL55-216ENST00000366744 PPP1R10Q96QC0 940 aaKnown RBP10.16□□□□□ -0.78
MRPL55-216ENST00000366744 ACCSQ96QU6 501 aa10.16□□□□□ -0.78
MRPL55-216ENST00000366744 TTPALQ9BTX7 342 aa10.16□□□□□ -0.78
MRPL55-216ENST00000366744 ST6GALNAC4Q9H4F1 302 aa10.16□□□□□ -0.78
MRPL55-216ENST00000366744 RPF1Q9H9Y2 349 aaKnown RBP10.16□□□□□ -0.78
MRPL55-216ENST00000366744 PLEKHA5Q9HAU0 1116 aa10.16□□□□□ -0.78
MRPL55-216ENST00000366744 PTPRHQ9HD43 1115 aa10.16□□□□□ -0.78
MRPL55-216ENST00000366744 MIOSQ9NXC5 875 aa10.16□□□□□ -0.78
MRPL55-216ENST00000366744 CLEC1BQ9P126 229 aa10.16□□□□□ -0.78
MRPL55-216ENST00000366744 CNTN3Q9P232 1028 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms