RNA–Protein interactions for RNA: ENST00000366666.6

CAPN9-203, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-203ENST00000366666 MCOLN1Q9GZU1 580 aa13.26□□□□□ -0.29
CAPN9-203ENST00000366666 AGPAT5Q9NUQ2 364 aa13.26□□□□□ -0.29
CAPN9-203ENST00000366666 PIN4Q9Y237 131 aaKnown RBP13.26□□□□□ -0.29
CAPN9-203ENST00000366666 SIK3Q9Y2K2 1263 aa13.26□□□□□ -0.29
CAPN9-203ENST00000366666 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.26□□□□□ -0.29
CAPN9-203ENST00000366666 UMODL1Q5DID0 1318 aa13.26□□□□□ -0.29
CAPN9-203ENST00000366666 ZNF233A6NK53 670 aa13.25□□□□□ -0.29
CAPN9-203ENST00000366666 OGTO15294 1046 aa13.25□□□□□ -0.29
CAPN9-203ENST00000366666 CD4P01730 458 aa13.25□□□□□ -0.29
CAPN9-203ENST00000366666 AFPP02771 609 aaKnown RBP13.25□□□□□ -0.29
CAPN9-203ENST00000366666 GHRP10912 638 aa13.25□□□□□ -0.29
CAPN9-203ENST00000366666 COL6A1P12109 1028 aa13.25□□□□□ -0.29
CAPN9-203ENST00000366666 GCLMP48507 274 aa13.25□□□□□ -0.29
CAPN9-203ENST00000366666 TBX2Q13207 712 aaPredicted RBP13.25□□□□□ -0.29
CAPN9-203ENST00000366666 SYT10Q6XYQ8 523 aa13.25□□□□□ -0.29
CAPN9-203ENST00000366666 SLC39A5Q6ZMH5 540 aa13.25□□□□□ -0.29
CAPN9-203ENST00000366666 RSPH3Q86UC2 560 aa13.25□□□□□ -0.29
CAPN9-203ENST00000366666 CPLX3Q8WVH0 158 aa13.25□□□□□ -0.29
CAPN9-203ENST00000366666 RBAKQ9NYW8 714 aaPredicted RBP13.25□□□□□ -0.29
CAPN9-203ENST00000366666 CPSF3Q9UKF6 684 aaKnown RBP13.25□□□□□ -0.29
CAPN9-203ENST00000366666 M0QZ92 97 aa13.25□□□□□ -0.29
CAPN9-203ENST00000366666 MAPK13O15264 365 aa13.25□□□□□ -0.29
CAPN9-203ENST00000366666 NPTXRO95502 500 aa13.25□□□□□ -0.29
CAPN9-203ENST00000366666 GYPCP04921 128 aa13.25□□□□□ -0.29
CAPN9-203ENST00000366666 CXCL8P10145 99 aa13.25□□□□□ -0.29
CAPN9-203ENST00000366666 ACTN1P12814 892 aa13.25□□□□□ -0.29
CAPN9-203ENST00000366666 SLC9A1P19634 815 aa13.25□□□□□ -0.29
CAPN9-203ENST00000366666 CD52P31358 61 aa13.25□□□□□ -0.29
CAPN9-203ENST00000366666 FMO5P49326 533 aa13.25□□□□□ -0.29
CAPN9-203ENST00000366666 FXR1P51114 621 aaKnown RBP eCLIP13.25□□□□□ -0.29
CAPN9-203ENST00000366666 ETF1P62495 437 aaKnown RBP13.25□□□□□ -0.29
CAPN9-203ENST00000366666 NFX1Q12986 1120 aaKnown RBP13.25□□□□□ -0.29
CAPN9-203ENST00000366666 LPIN1Q14693 890 aa13.25□□□□□ -0.29
CAPN9-203ENST00000366666 ENOX2Q16206 610 aaKnown RBP13.25□□□□□ -0.29
CAPN9-203ENST00000366666 PAWRQ96IZ0 340 aaKnown RBP13.25□□□□□ -0.29
CAPN9-203ENST00000366666 ERGIC2Q96RQ1 377 aa13.25□□□□□ -0.29
CAPN9-203ENST00000366666 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.25□□□□□ -0.29
CAPN9-203ENST00000366666 RNF19AQ9NV58 838 aa13.25□□□□□ -0.29
CAPN9-203ENST00000366666 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.25□□□□□ -0.29
CAPN9-203ENST00000366666 ST3GAL5Q9UNP4 418 aa13.25□□□□□ -0.29
CAPN9-203ENST00000366666 V9GYY5 206 aaPredicted RBP13.25□□□□□ -0.29
CAPN9-203ENST00000366666 RPS6KA5O75582 802 aa13.24□□□□□ -0.29
CAPN9-203ENST00000366666 TPM1P09493 284 aa13.24□□□□□ -0.29
CAPN9-203ENST00000366666 KRT13P13646 458 aa13.24□□□□□ -0.29
CAPN9-203ENST00000366666 ADKP55263 362 aaKnown RBP13.24□□□□□ -0.29
CAPN9-203ENST00000366666 RBL2Q08999 1139 aa13.24□□□□□ -0.29
CAPN9-203ENST00000366666 FBXO47Q5MNV8 452 aa13.24□□□□□ -0.29
CAPN9-203ENST00000366666 UBXN11Q5T124 520 aa13.24□□□□□ -0.29
CAPN9-203ENST00000366666 DPY19L2P1Q6NXN4 242 aa13.24□□□□□ -0.29
CAPN9-203ENST00000366666 FAM212AQ96EL1 285 aa13.24□□□□□ -0.29
CAPN9-203ENST00000366666 TMX1Q9H3N1 280 aa13.24□□□□□ -0.29
CAPN9-203ENST00000366666 NXF3Q9H4D5 531 aaKnown RBP13.24□□□□□ -0.29
CAPN9-203ENST00000366666 FAM207AQ9NSI2 230 aaPredicted RBP13.24□□□□□ -0.29
CAPN9-203ENST00000366666 LAMA2P24043 3122 aaKnown RBP13.24□□□□□ -0.29
CAPN9-203ENST00000366666 STAG3L1P0CL83 205 aa13.24□□□□□ -0.29
CAPN9-203ENST00000366666 CASP14P31944 242 aa13.24□□□□□ -0.29
CAPN9-203ENST00000366666 MCCD1P59942 119 aaPredicted RBP13.24□□□□□ -0.29
CAPN9-203ENST00000366666 TRIM60Q495X7 471 aa13.24□□□□□ -0.29
CAPN9-203ENST00000366666 FKBP15Q5T1M5 1219 aa13.24□□□□□ -0.29
CAPN9-203ENST00000366666 GPIHBP1Q8IV16 184 aa13.24□□□□□ -0.29
CAPN9-203ENST00000366666 TMEM117Q9H0C3 514 aa13.24□□□□□ -0.29
CAPN9-203ENST00000366666 PADI3Q9ULW8 664 aa13.24□□□□□ -0.29
CAPN9-203ENST00000366666 A0A1W2PQC6 194 aa13.23□□□□□ -0.29
CAPN9-203ENST00000366666 MGEA5O60502 916 aa13.23□□□□□ -0.29
CAPN9-203ENST00000366666 NOL4O94818 638 aa13.23□□□□□ -0.29
CAPN9-203ENST00000366666 LDHAP00338 332 aaKnown RBP13.23□□□□□ -0.29
CAPN9-203ENST00000366666 MCF2P10911 925 aa13.23□□□□□ -0.29
CAPN9-203ENST00000366666 GPNMBQ14956 572 aa13.23□□□□□ -0.29
CAPN9-203ENST00000366666 PSMD6Q15008 389 aa13.23□□□□□ -0.29
CAPN9-203ENST00000366666 ERCC6LQ2NKX8 1250 aa13.23□□□□□ -0.29
CAPN9-203ENST00000366666 SLC10A6Q3KNW5 377 aa13.23□□□□□ -0.29
CAPN9-203ENST00000366666 FAM26DQ5JW98 314 aa13.23□□□□□ -0.29
CAPN9-203ENST00000366666 NOTUMQ6P988 496 aa13.23□□□□□ -0.29
CAPN9-203ENST00000366666 SLC27A1Q6PCB7 646 aa13.23□□□□□ -0.29
CAPN9-203ENST00000366666 BRSK2Q8IWQ3 736 aa13.23□□□□□ -0.29
CAPN9-203ENST00000366666 PLCD3Q8N3E9 789 aa13.23□□□□□ -0.29
CAPN9-203ENST00000366666 OR5B17Q8NGF7 314 aa13.23□□□□□ -0.29
CAPN9-203ENST00000366666 PCMTD1Q96MG8 357 aaPredicted RBP13.23□□□□□ -0.29
CAPN9-203ENST00000366666 TTYH3Q9C0H2 523 aa13.23□□□□□ -0.29
CAPN9-203ENST00000366666 RNF39Q9H2S5 420 aa13.23□□□□□ -0.29
CAPN9-203ENST00000366666 YY1AP1Q9H869 796 aa13.23□□□□□ -0.29
CAPN9-203ENST00000366666 KIAA1586Q9HCI6 787 aa13.23□□□□□ -0.29
CAPN9-203ENST00000366666 ARGLU1Q9NWB6 273 aaPredicted RBP13.23□□□□□ -0.29
CAPN9-203ENST00000366666 AJAP1Q9UKB5 411 aaPredicted RBP13.23□□□□□ -0.29
CAPN9-203ENST00000366666 TTC26A0AVF1 554 aa13.22□□□□□ -0.29
CAPN9-203ENST00000366666 MEIS3P2A8K0S8 358 aa13.22□□□□□ -0.29
CAPN9-203ENST00000366666 KIAA0391O15091 583 aaKnown RBP13.22□□□□□ -0.29
CAPN9-203ENST00000366666 ATP8B1O43520 1251 aa13.22□□□□□ -0.29
CAPN9-203ENST00000366666 PON1P27169 355 aa13.22□□□□□ -0.29
CAPN9-203ENST00000366666 TLE2Q04725 743 aa13.22□□□□□ -0.29
CAPN9-203ENST00000366666 FAAP100Q0VG06 881 aa13.22□□□□□ -0.29
CAPN9-203ENST00000366666 GJB7Q6PEY0 223 aa13.22□□□□□ -0.29
CAPN9-203ENST00000366666 EFCAB13Q8IY85 973 aa13.22□□□□□ -0.29
CAPN9-203ENST00000366666 LMO3Q8TAP4 145 aa13.22□□□□□ -0.29
CAPN9-203ENST00000366666 TMC2Q8TDI7 906 aa13.22□□□□□ -0.29
CAPN9-203ENST00000366666 SEMA4DQ92854 862 aa13.22□□□□□ -0.29
CAPN9-203ENST00000366666 SIX2Q9NPC8 291 aa13.22□□□□□ -0.29
CAPN9-203ENST00000366666 ZNF446Q9NWS9 450 aa13.22□□□□□ -0.29
CAPN9-203ENST00000366666 SNTG2Q9NY99 539 aa13.22□□□□□ -0.29
CAPN9-203ENST00000366666 GCNT4Q9P109 453 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms