RNA–Protein interactions for RNA: ENST00000363904.1

RNU6-478P-201, Transcript of RNA, U6 small nuclear 478, pseudogene, humanhuman

BASIC

Gene RNU6-478P, Length 110 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-478P-201ENST00000363904 PDGFCQ9NRA1 345 aa0.72□□□□□ -2.29
RNU6-478P-201ENST00000363904 SLC7A10Q9NS82 523 aa0.72□□□□□ -2.29
RNU6-478P-201ENST00000363904 POLR3BQ9NW08 1133 aaPredicted RBP0.72□□□□□ -2.29
RNU6-478P-201ENST00000363904 SH3BP4Q9P0V3 963 aa0.72□□□□□ -2.29
RNU6-478P-201ENST00000363904 DNAI1Q9UI46 699 aa0.72□□□□□ -2.29
RNU6-478P-201ENST00000363904 PCDHB6Q9Y5E3 794 aa0.72□□□□□ -2.29
RNU6-478P-201ENST00000363904 SNED1Q8TER0 1413 aa0.72□□□□□ -2.29
RNU6-478P-201ENST00000363904 TRGV11A0A075B6L2 103 aa0.71□□□□□ -2.3
RNU6-478P-201ENST00000363904 A0A1B0GU03 582 aa0.71□□□□□ -2.3
RNU6-478P-201ENST00000363904 FAM83GA6ND36 823 aa0.71□□□□□ -2.3
RNU6-478P-201ENST00000363904 BCAR3O75815 825 aa0.71□□□□□ -2.3
RNU6-478P-201ENST00000363904 C4BPAP04003 597 aaKnown RBP0.71□□□□□ -2.3
RNU6-478P-201ENST00000363904 RGS3P49796 1198 aa0.71□□□□□ -2.3
RNU6-478P-201ENST00000363904 CSRP3P50461 194 aa0.71□□□□□ -2.3
RNU6-478P-201ENST00000363904 UBXN2BQ14CS0 331 aa0.71□□□□□ -2.3
RNU6-478P-201ENST00000363904 SF3B3Q15393 1217 aaKnown RBP0.71□□□□□ -2.3
RNU6-478P-201ENST00000363904 AGAP9Q5VTM2 703 aa0.71□□□□□ -2.3
RNU6-478P-201ENST00000363904 FOXR2Q6PJQ5 311 aa0.71□□□□□ -2.3
RNU6-478P-201ENST00000363904 CATSPERGQ6ZRH7 1159 aa0.71□□□□□ -2.3
RNU6-478P-201ENST00000363904 ARHGAP36Q6ZRI8 547 aa0.71□□□□□ -2.3
RNU6-478P-201ENST00000363904 RHOT2Q8IXI1 618 aa0.71□□□□□ -2.3
RNU6-478P-201ENST00000363904 IFNL3Q8IZI9 196 aa0.71□□□□□ -2.3
RNU6-478P-201ENST00000363904 PELI3Q8N2H9 469 aa0.71□□□□□ -2.3
RNU6-478P-201ENST00000363904 TMEM145Q8NBT3 493 aa0.71□□□□□ -2.3
RNU6-478P-201ENST00000363904 B4GALNT2Q8NHY0 566 aa0.71□□□□□ -2.3
RNU6-478P-201ENST00000363904 PPP1R14CQ8TAE6 165 aa0.71□□□□□ -2.3
RNU6-478P-201ENST00000363904 KLHL6Q8WZ60 621 aa0.71□□□□□ -2.3
RNU6-478P-201ENST00000363904 ATP2A3Q93084 1043 aa0.71□□□□□ -2.3
RNU6-478P-201ENST00000363904 HES6Q96HZ4 224 aa0.71□□□□□ -2.3
RNU6-478P-201ENST00000363904 C5orf34Q96MH7 638 aa0.71□□□□□ -2.3
RNU6-478P-201ENST00000363904 GBP4Q96PP9 640 aa0.71□□□□□ -2.3
RNU6-478P-201ENST00000363904 ZSWIM1Q9BR11 485 aa0.71□□□□□ -2.3
RNU6-478P-201ENST00000363904 PHF20Q9BVI0 1012 aa0.71□□□□□ -2.3
RNU6-478P-201ENST00000363904 CDCP1Q9H5V8 836 aa0.71□□□□□ -2.3
RNU6-478P-201ENST00000363904 MRPL44Q9H9J2 332 aaKnown RBP0.71□□□□□ -2.3
RNU6-478P-201ENST00000363904 COPRSQ9NQ92 184 aa0.71□□□□□ -2.3
RNU6-478P-201ENST00000363904 RNF19AQ9NV58 838 aa0.71□□□□□ -2.3
RNU6-478P-201ENST00000363904 INTS7Q9NVH2 962 aaKnown RBP0.71□□□□□ -2.3
RNU6-478P-201ENST00000363904 ING3Q9NXR8 418 aa0.71□□□□□ -2.3
RNU6-478P-201ENST00000363904 LRP2BPQ9P2M1 347 aa0.71□□□□□ -2.3
RNU6-478P-201ENST00000363904 COL4A4P53420 1690 aaPredicted RBP0.71□□□□□ -2.3
RNU6-478P-201ENST00000363904 WDR17Q8IZU2 1322 aa0.7□□□□□ -2.3
RNU6-478P-201ENST00000363904 TCRBV5S4A2TA0A5A2 114 aa0.7□□□□□ -2.3
RNU6-478P-201ENST00000363904 SCAMP3O14828 347 aaKnown RBP0.7□□□□□ -2.3
RNU6-478P-201ENST00000363904 TTLL1O95922 423 aa0.7□□□□□ -2.3
RNU6-478P-201ENST00000363904 SOD2P04179 222 aa0.7□□□□□ -2.3
RNU6-478P-201ENST00000363904 CD19P15391 556 aa0.7□□□□□ -2.3
RNU6-478P-201ENST00000363904 VAV2P52735 878 aa0.7□□□□□ -2.3
RNU6-478P-201ENST00000363904 ZNF143P52747 638 aaPredicted RBP0.7□□□□□ -2.3
RNU6-478P-201ENST00000363904 CHN2P52757 468 aa0.7□□□□□ -2.3
RNU6-478P-201ENST00000363904 MST1LQ2TV78 715 aa0.7□□□□□ -2.3
RNU6-478P-201ENST00000363904 FIGNQ5HY92 759 aa0.7□□□□□ -2.3
RNU6-478P-201ENST00000363904 PDXDC1Q6P996 788 aa0.7□□□□□ -2.3
RNU6-478P-201ENST00000363904 TXNDC2Q86VQ3 553 aa0.7□□□□□ -2.3
RNU6-478P-201ENST00000363904 CAMKK1Q8N5S9 505 aa0.7□□□□□ -2.3
RNU6-478P-201ENST00000363904 ASB15Q8WXK1 588 aa0.7□□□□□ -2.3
RNU6-478P-201ENST00000363904 ERCC4Q92889 916 aaPredicted RBP0.7□□□□□ -2.3
RNU6-478P-201ENST00000363904 MED30Q96HR3 178 aa0.7□□□□□ -2.3
RNU6-478P-201ENST00000363904 ASB16Q96NS5 453 aa0.7□□□□□ -2.3
RNU6-478P-201ENST00000363904 CAMK1GQ96NX5 476 aa0.7□□□□□ -2.3
RNU6-478P-201ENST00000363904 NEU1Q99519 415 aa0.7□□□□□ -2.3
RNU6-478P-201ENST00000363904 SENP6Q9GZR1 1112 aaPredicted RBP0.7□□□□□ -2.3
RNU6-478P-201ENST00000363904 RNPEPQ9H4A4 650 aa0.7□□□□□ -2.3
RNU6-478P-201ENST00000363904 KLHL11Q9NVR0 708 aa0.7□□□□□ -2.3
RNU6-478P-201ENST00000363904 SYNPO2Q9UMS6 1093 aa0.7□□□□□ -2.3
RNU6-478P-201ENST00000363904 ASB1Q9Y576 335 aa0.7□□□□□ -2.3
RNU6-478P-201ENST00000363904 A0A1B0GTW7 788 aa0.69□□□□□ -2.3
RNU6-478P-201ENST00000363904 SRRM3A6NNA2 597 aaPredicted RBP0.69□□□□□ -2.3
RNU6-478P-201ENST00000363904 B5MCH6 92 aa0.69□□□□□ -2.3
RNU6-478P-201ENST00000363904 MYO1FO00160 1098 aa0.69□□□□□ -2.3
RNU6-478P-201ENST00000363904 TBX1O43435 398 aa0.69□□□□□ -2.3
RNU6-478P-201ENST00000363904 TULP3O75386 442 aa0.69□□□□□ -2.3
RNU6-478P-201ENST00000363904 JTBO76095 146 aa0.69□□□□□ -2.3
RNU6-478P-201ENST00000363904 GPANK1O95872 356 aa0.69□□□□□ -2.3
RNU6-478P-201ENST00000363904 CTSHP09668 335 aa0.69□□□□□ -2.3
RNU6-478P-201ENST00000363904 CLEC2LP0C7M8 214 aa0.69□□□□□ -2.3
RNU6-478P-201ENST00000363904 NHLRC4P0CG21 123 aaPredicted RBP0.69□□□□□ -2.3
RNU6-478P-201ENST00000363904 KRT15P19012 456 aa0.69□□□□□ -2.3
RNU6-478P-201ENST00000363904 ME1P48163 572 aa0.69□□□□□ -2.3
RNU6-478P-201ENST00000363904 GJA8P48165 433 aa0.69□□□□□ -2.3
RNU6-478P-201ENST00000363904 GFRA1P56159 465 aa0.69□□□□□ -2.3
RNU6-478P-201ENST00000363904 ERVK11-1P61568 191 aa0.69□□□□□ -2.3
RNU6-478P-201ENST00000363904 GPR19Q15760 415 aa0.69□□□□□ -2.3
RNU6-478P-201ENST00000363904 CYP2A13Q16696 494 aa0.69□□□□□ -2.3
RNU6-478P-201ENST00000363904 MAN2A1Q16706 1144 aa0.69□□□□□ -2.3
RNU6-478P-201ENST00000363904 METRNLQ641Q3 311 aa0.69□□□□□ -2.3
RNU6-478P-201ENST00000363904 CEP85Q6P2H3 762 aa0.69□□□□□ -2.3
RNU6-478P-201ENST00000363904 ZNF449Q6P9G9 518 aa0.69□□□□□ -2.3
RNU6-478P-201ENST00000363904 VHLLQ6RSH7 139 aa0.69□□□□□ -2.3
RNU6-478P-201ENST00000363904 RSPO2Q6UXX9 243 aaPredicted RBP0.69□□□□□ -2.3
RNU6-478P-201ENST00000363904 LBX2Q6XYB7 198 aa0.69□□□□□ -2.3
RNU6-478P-201ENST00000363904 USP53Q70EK8 1073 aa0.69□□□□□ -2.3
RNU6-478P-201ENST00000363904 PTRH1Q86Y79 214 aaKnown RBP0.69□□□□□ -2.3
RNU6-478P-201ENST00000363904 RBBP8NLQ8NC74 664 aaPredicted RBP0.69□□□□□ -2.3
RNU6-478P-201ENST00000363904 TOR1AIP2Q8NFQ8 470 aa0.69□□□□□ -2.3
RNU6-478P-201ENST00000363904 ZFP28Q8NHY6 868 aa0.69□□□□□ -2.3
RNU6-478P-201ENST00000363904 NACC2Q96BF6 587 aa0.69□□□□□ -2.3
RNU6-478P-201ENST00000363904 CRBNQ96SW2 442 aa0.69□□□□□ -2.3
RNU6-478P-201ENST00000363904 NT5C1AQ9BXI3 368 aa0.69□□□□□ -2.3
RNU6-478P-201ENST00000363904 KLHL13Q9P2N7 655 aa0.69□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms