RNA–Protein interactions for RNA: ENST00000362061.3

CACNA1S-201, Transcript of calcium voltage-gated channel subunit alpha1 S, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CACNA1S, Length 6,166 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1S-201ENST00000362061 ARMC6Q6NXE6 501 aa11.18□□□□□ -0.62
CACNA1S-201ENST00000362061 ANKS3Q6ZW76 656 aa11.18□□□□□ -0.62
CACNA1S-201ENST00000362061 BCAS4Q8TDM0 211 aa11.18□□□□□ -0.62
CACNA1S-201ENST00000362061 MAML1Q92585 1016 aa11.18□□□□□ -0.62
CACNA1S-201ENST00000362061 KCNH7Q9NS40 1196 aa11.18□□□□□ -0.62
CACNA1S-201ENST00000362061 FBXO28Q9NVF7 368 aa11.18□□□□□ -0.62
CACNA1S-201ENST00000362061 CCDC151A5D8V7 595 aa11.18□□□□□ -0.62
CACNA1S-201ENST00000362061 KPNA7A9QM74 516 aa11.18□□□□□ -0.62
CACNA1S-201ENST00000362061 CYP26A1O43174 497 aa11.18□□□□□ -0.62
CACNA1S-201ENST00000362061 URODP06132 367 aa11.18□□□□□ -0.62
CACNA1S-201ENST00000362061 ARHGDIAP52565 204 aa11.18□□□□□ -0.62
CACNA1S-201ENST00000362061 RABGGTAQ92696 567 aa11.18□□□□□ -0.62
CACNA1S-201ENST00000362061 H7C4K7 107 aa11.18□□□□□ -0.62
CACNA1S-201ENST00000362061 OPHN1O60890 802 aa11.18□□□□□ -0.62
CACNA1S-201ENST00000362061 MX2P20592 715 aa11.18□□□□□ -0.62
CACNA1S-201ENST00000362061 GUCY1A2P33402 732 aa11.18□□□□□ -0.62
CACNA1S-201ENST00000362061 COPS2P61201 443 aa11.18□□□□□ -0.62
CACNA1S-201ENST00000362061 NBPF9Q3BBW0 867 aa11.18□□□□□ -0.62
CACNA1S-201ENST00000362061 NBPF12Q5TAG4 269 aaPredicted RBP11.18□□□□□ -0.62
CACNA1S-201ENST00000362061 ZC3H18Q86VM9 953 aaKnown RBP11.18□□□□□ -0.62
CACNA1S-201ENST00000362061 RASSF3Q86WH2 238 aa11.18□□□□□ -0.62
CACNA1S-201ENST00000362061 MFN1Q8IWA4 741 aa11.18□□□□□ -0.62
CACNA1S-201ENST00000362061 ATPAF2Q8N5M1 289 aa11.18□□□□□ -0.62
CACNA1S-201ENST00000362061 TTC17Q96AE7 1141 aa11.18□□□□□ -0.62
CACNA1S-201ENST00000362061 MED4Q9NPJ6 270 aa11.18□□□□□ -0.62
CACNA1S-201ENST00000362061 KLK14Q9P0G3 267 aa11.18□□□□□ -0.62
CACNA1S-201ENST00000362061 SNX24Q9Y343 169 aa11.18□□□□□ -0.62
CACNA1S-201ENST00000362061 CAMSAP1Q5T5Y3 1602 aa11.18□□□□□ -0.62
CACNA1S-201ENST00000362061 PQBP1O60828 265 aaKnown RBP11.17□□□□□ -0.62
CACNA1S-201ENST00000362061 PDGFRAP16234 1089 aa11.17□□□□□ -0.62
CACNA1S-201ENST00000362061 GPRASP2Q96D09 838 aa11.17□□□□□ -0.62
CACNA1S-201ENST00000362061 RIT2Q99578 217 aa11.17□□□□□ -0.62
CACNA1S-201ENST00000362061 NT5C1AQ9BXI3 368 aa11.17□□□□□ -0.62
CACNA1S-201ENST00000362061 JMJD4Q9H9V9 463 aa11.17□□□□□ -0.62
CACNA1S-201ENST00000362061 SENP1Q9P0U3 644 aa11.17□□□□□ -0.62
CACNA1S-201ENST00000362061 A0A1B0GUA9 196 aa11.17□□□□□ -0.62
CACNA1S-201ENST00000362061 PRR23AA6NEV1 266 aa11.17□□□□□ -0.62
CACNA1S-201ENST00000362061 CCDC188H7C350 402 aa11.17□□□□□ -0.62
CACNA1S-201ENST00000362061 PDHXO00330 501 aa11.17□□□□□ -0.62
CACNA1S-201ENST00000362061 ZC3H11AO75152 810 aaKnown RBP eCLIP11.17□□□□□ -0.62
CACNA1S-201ENST00000362061 YY1P25490 414 aa11.17□□□□□ -0.62
CACNA1S-201ENST00000362061 TWF1Q12792 350 aa11.17□□□□□ -0.62
CACNA1S-201ENST00000362061 ANKRD20A4Q4UJ75 823 aa11.17□□□□□ -0.62
CACNA1S-201ENST00000362061 ANKRD20A8PQ5CZ79 823 aa11.17□□□□□ -0.62
CACNA1S-201ENST00000362061 ANKRD20A2Q5SQ80 823 aa11.17□□□□□ -0.62
CACNA1S-201ENST00000362061 ANKRD20A1Q5TYW2 823 aa11.17□□□□□ -0.62
CACNA1S-201ENST00000362061 FRMD5Q7Z6J6 570 aa11.17□□□□□ -0.62
CACNA1S-201ENST00000362061 CHSY1Q86X52 802 aa11.17□□□□□ -0.62
CACNA1S-201ENST00000362061 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.17□□□□□ -0.62
CACNA1S-201ENST00000362061 ICAM1P05362 532 aa11.17□□□□□ -0.62
CACNA1S-201ENST00000362061 HIST1H2AGP0C0S8 130 aaPredicted RBP11.17□□□□□ -0.62
CACNA1S-201ENST00000362061 ODC1P11926 461 aa11.17□□□□□ -0.62
CACNA1S-201ENST00000362061 HIST1H2ADP20671 130 aa11.17□□□□□ -0.62
CACNA1S-201ENST00000362061 MMP14P50281 582 aa11.17□□□□□ -0.62
CACNA1S-201ENST00000362061 TMPRSS15P98073 1019 aa11.17□□□□□ -0.62
CACNA1S-201ENST00000362061 TMC7Q7Z402 723 aa11.17□□□□□ -0.62
CACNA1S-201ENST00000362061 UCMAQ8WVF2 138 aa11.17□□□□□ -0.62
CACNA1S-201ENST00000362061 BHMTQ93088 406 aa11.17□□□□□ -0.62
CACNA1S-201ENST00000362061 HIST1H2AHQ96KK5 128 aa11.17□□□□□ -0.62
CACNA1S-201ENST00000362061 HIST1H2AJQ99878 128 aa11.17□□□□□ -0.62
CACNA1S-201ENST00000362061 H2AFJQ9BTM1 129 aa11.17□□□□□ -0.62
CACNA1S-201ENST00000362061 RASSF4Q9H2L5 321 aa11.17□□□□□ -0.62
CACNA1S-201ENST00000362061 NR2E3Q9Y5X4 410 aa11.17□□□□□ -0.62
CACNA1S-201ENST00000362061 CHRNA3P32297 505 aa11.17□□□□□ -0.62
CACNA1S-201ENST00000362061 TAF6P49848 677 aa11.17□□□□□ -0.62
CACNA1S-201ENST00000362061 SLC7A5Q01650 507 aa11.17□□□□□ -0.62
CACNA1S-201ENST00000362061 SNRNP35Q16560 246 aaKnown RBP11.17□□□□□ -0.62
CACNA1S-201ENST00000362061 INTS5Q6P9B9 1019 aaKnown RBP11.17□□□□□ -0.62
CACNA1S-201ENST00000362061 FBXO16Q8IX29 292 aaPredicted RBP11.17□□□□□ -0.62
CACNA1S-201ENST00000362061 PPM1NQ8N819 430 aa11.17□□□□□ -0.62
CACNA1S-201ENST00000362061 CCDC197Q8NCU1 140 aa11.17□□□□□ -0.62
CACNA1S-201ENST00000362061 USP33Q8TEY7 942 aa11.17□□□□□ -0.62
CACNA1S-201ENST00000362061 L3MBTL3Q96JM7 780 aaPredicted RBP11.17□□□□□ -0.62
CACNA1S-201ENST00000362061 GLIS2Q9BZE0 524 aaPredicted RBP11.17□□□□□ -0.62
CACNA1S-201ENST00000362061 TMEM39AQ9NV64 488 aa11.17□□□□□ -0.62
CACNA1S-201ENST00000362061 PRR29P0C7W0 189 aa11.17□□□□□ -0.62
CACNA1S-201ENST00000362061 GNL1P36915 607 aaPredicted RBP11.17□□□□□ -0.62
CACNA1S-201ENST00000362061 CRLF3Q8IUI8 442 aa11.17□□□□□ -0.62
CACNA1S-201ENST00000362061 MRPS31Q92665 395 aaKnown RBP11.17□□□□□ -0.62
CACNA1S-201ENST00000362061 TUBE1Q9UJT0 475 aa11.17□□□□□ -0.62
CACNA1S-201ENST00000362061 PCDHB12Q9Y5F1 795 aa11.17□□□□□ -0.62
CACNA1S-201ENST00000362061 TTLL13PA6NNM8 815 aa11.16□□□□□ -0.62
CACNA1S-201ENST00000362061 MAP3K13O43283 966 aa11.16□□□□□ -0.62
CACNA1S-201ENST00000362061 B3GAT3O94766 335 aa11.16□□□□□ -0.62
CACNA1S-201ENST00000362061 DEUP1Q05D60 604 aa11.16□□□□□ -0.62
CACNA1S-201ENST00000362061 SFSWAPQ12872 951 aaKnown RBP11.16□□□□□ -0.62
CACNA1S-201ENST00000362061 ACER1Q8TDN7 264 aa11.16□□□□□ -0.62
CACNA1S-201ENST00000362061 SLC26A7Q8TE54 656 aa11.16□□□□□ -0.62
CACNA1S-201ENST00000362061 REEP2Q9BRK0 252 aa11.16□□□□□ -0.62
CACNA1S-201ENST00000362061 KCND2Q9NZV8 630 aa11.16□□□□□ -0.62
CACNA1S-201ENST00000362061 SLC30A1Q9Y6M5 507 aa11.16□□□□□ -0.62
CACNA1S-201ENST00000362061 SRGNP10124 158 aa11.16□□□□□ -0.62
CACNA1S-201ENST00000362061 ACTR2P61160 394 aa11.16□□□□□ -0.62
CACNA1S-201ENST00000362061 ZNF211Q13398 564 aaPredicted RBP11.16□□□□□ -0.62
CACNA1S-201ENST00000362061 RBBP7Q16576 425 aa11.16□□□□□ -0.62
CACNA1S-201ENST00000362061 C3orf70A6NLC5 250 aaPredicted RBP11.16□□□□□ -0.62
CACNA1S-201ENST00000362061 SPECC1L-ADORA2AF8WAN1 911 aa11.16□□□□□ -0.62
CACNA1S-201ENST00000362061 ZNF189O75820 626 aaPredicted RBP11.16□□□□□ -0.62
CACNA1S-201ENST00000362061 PNPLA4P41247 253 aa11.16□□□□□ -0.62
CACNA1S-201ENST00000362061 GPS1Q13098 491 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms