RNA–Protein interactions for RNA: ENST00000361654.8

CLIP1-203, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 5,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-203ENST00000361654 KPNA6O60684 536 aa11.57□□□□□ -0.56
CLIP1-203ENST00000361654 ARIH2O95376 493 aa11.57□□□□□ -0.56
CLIP1-203ENST00000361654 SLCO1A2P46721 670 aa11.57□□□□□ -0.56
CLIP1-203ENST00000361654 MDM2Q00987 491 aaPredicted RBP11.57□□□□□ -0.56
CLIP1-203ENST00000361654 MTHFD1LQ6UB35 978 aa11.57□□□□□ -0.56
CLIP1-203ENST00000361654 FBXO41Q8TF61 875 aa11.57□□□□□ -0.56
CLIP1-203ENST00000361654 USP13Q92995 863 aaPredicted RBP11.57□□□□□ -0.56
CLIP1-203ENST00000361654 NDEL1Q9GZM8 345 aa11.57□□□□□ -0.56
CLIP1-203ENST00000361654 CPVLQ9H3G5 476 aa11.57□□□□□ -0.56
CLIP1-203ENST00000361654 C6orf203Q9P0P8 240 aaPredicted RBP11.57□□□□□ -0.56
CLIP1-203ENST00000361654 KIF21AQ7Z4S6 1674 aa11.57□□□□□ -0.56
CLIP1-203ENST00000361654 UBXN8O00124 270 aa11.57□□□□□ -0.56
CLIP1-203ENST00000361654 SUPT3HO75486 399 aa11.57□□□□□ -0.56
CLIP1-203ENST00000361654 HMOX2P30519 316 aa11.57□□□□□ -0.56
CLIP1-203ENST00000361654 TRIM28Q13263 835 aaKnown RBP11.57□□□□□ -0.56
CLIP1-203ENST00000361654 PDCLQ13371 301 aa11.57□□□□□ -0.56
CLIP1-203ENST00000361654 SGSM1Q2NKQ1 1148 aa11.57□□□□□ -0.56
CLIP1-203ENST00000361654 RNF25Q96BH1 459 aaPredicted RBP11.57□□□□□ -0.56
CLIP1-203ENST00000361654 PANX2Q96RD6 677 aa11.57□□□□□ -0.56
CLIP1-203ENST00000361654 MTFR1LQ9H019 292 aa11.57□□□□□ -0.56
CLIP1-203ENST00000361654 TMEM260Q9NX78 707 aa11.57□□□□□ -0.56
CLIP1-203ENST00000361654 CDK12Q9NYV4 1490 aaPredicted RBP11.57□□□□□ -0.56
CLIP1-203ENST00000361654 SETSIPP0DME0 302 aa11.57□□□□□ -0.56
CLIP1-203ENST00000361654 RGS4P49798 205 aa11.57□□□□□ -0.56
CLIP1-203ENST00000361654 TTC17Q96AE7 1141 aa11.57□□□□□ -0.56
CLIP1-203ENST00000361654 C18orf8Q96DM3 657 aa11.57□□□□□ -0.56
CLIP1-203ENST00000361654 NUP85Q9BW27 656 aa11.57□□□□□ -0.56
CLIP1-203ENST00000361654 EML4Q9HC35 981 aaKnown RBP11.57□□□□□ -0.56
CLIP1-203ENST00000361654 SPTLC3Q9NUV7 552 aa11.57□□□□□ -0.56
CLIP1-203ENST00000361654 KIF17Q9P2E2 1029 aa11.57□□□□□ -0.56
CLIP1-203ENST00000361654 ZBTB12Q9Y330 459 aaPredicted RBP11.57□□□□□ -0.56
CLIP1-203ENST00000361654 ZNF263O14978 683 aa11.56□□□□□ -0.56
CLIP1-203ENST00000361654 NDUFS3O75489 264 aa11.56□□□□□ -0.56
CLIP1-203ENST00000361654 ATP1A1P05023 1023 aaKnown RBP11.56□□□□□ -0.56
CLIP1-203ENST00000361654 THPOP40225 353 aa11.56□□□□□ -0.56
CLIP1-203ENST00000361654 SLC7A14Q8TBB6 771 aa11.56□□□□□ -0.56
CLIP1-203ENST00000361654 TSPAN17Q96FV3 270 aa11.56□□□□□ -0.56
CLIP1-203ENST00000361654 BTBD6Q96KE9 485 aa11.56□□□□□ -0.56
CLIP1-203ENST00000361654 SAMSN1Q9NSI8 373 aaKnown RBP11.56□□□□□ -0.56
CLIP1-203ENST00000361654 HDAC6Q9UBN7 1215 aa11.56□□□□□ -0.56
CLIP1-203ENST00000361654 ANGPTL2Q9UKU9 493 aa11.56□□□□□ -0.56
CLIP1-203ENST00000361654 PCDHB12Q9Y5F1 795 aa11.56□□□□□ -0.56
CLIP1-203ENST00000361654 SPACA6W5XKT8 324 aa11.56□□□□□ -0.56
CLIP1-203ENST00000361654 GTPBP10A4D1E9 387 aaKnown RBP11.56□□□□□ -0.56
CLIP1-203ENST00000361654 ZBTB22O15209 634 aa11.56□□□□□ -0.56
CLIP1-203ENST00000361654 ZSCAN9O15535 394 aaPredicted RBP11.56□□□□□ -0.56
CLIP1-203ENST00000361654 CTIFO43310 598 aaKnown RBP11.56□□□□□ -0.56
CLIP1-203ENST00000361654 CDC27P30260 824 aa11.56□□□□□ -0.56
CLIP1-203ENST00000361654 TRADDQ15628 312 aa11.56□□□□□ -0.56
CLIP1-203ENST00000361654 RASIP1Q5U651 963 aa11.56□□□□□ -0.56
CLIP1-203ENST00000361654 KCTD16Q68DU8 428 aa11.56□□□□□ -0.56
CLIP1-203ENST00000361654 ERO1BQ86YB8 467 aa11.56□□□□□ -0.56
CLIP1-203ENST00000361654 ECT2Q9H8V3 914 aa11.56□□□□□ -0.56
CLIP1-203ENST00000361654 LATS2Q9NRM7 1088 aa11.56□□□□□ -0.56
CLIP1-203ENST00000361654 SLC26A4O43511 780 aa11.56□□□□□ -0.56
CLIP1-203ENST00000361654 SLC2A3P11169 496 aa11.56□□□□□ -0.56
CLIP1-203ENST00000361654 EPHX2P34913 555 aa11.56□□□□□ -0.56
CLIP1-203ENST00000361654 C12orf60Q5U649 245 aa11.56□□□□□ -0.56
CLIP1-203ENST00000361654 KRT35Q92764 455 aa11.56□□□□□ -0.56
CLIP1-203ENST00000361654 RUBCNLQ9H714 662 aa11.56□□□□□ -0.56
CLIP1-203ENST00000361654 SLC25A13Q9UJS0 675 aa11.56□□□□□ -0.56
CLIP1-203ENST00000361654 FLT1P17948 1338 aa11.56□□□□□ -0.56
CLIP1-203ENST00000361654 DYRK3O43781 588 aa11.56□□□□□ -0.56
CLIP1-203ENST00000361654 VCLP18206 1134 aa11.56□□□□□ -0.56
CLIP1-203ENST00000361654 EFTUD2Q15029 972 aaKnown RBP eCLIP11.56□□□□□ -0.564e-6■■□□□ 11.5
CLIP1-203ENST00000361654 PTPAQ15257 358 aa11.56□□□□□ -0.56
CLIP1-203ENST00000361654 SF3B3Q15393 1217 aaKnown RBP11.56□□□□□ -0.56
CLIP1-203ENST00000361654 UGP2Q16851 508 aa11.56□□□□□ -0.56
CLIP1-203ENST00000361654 FASTKD1Q53R41 847 aaKnown RBP11.56□□□□□ -0.56
CLIP1-203ENST00000361654 ALS2CLQ60I27 953 aa11.56□□□□□ -0.56
CLIP1-203ENST00000361654 ZFP42Q96MM3 310 aa11.56□□□□□ -0.56
CLIP1-203ENST00000361654 KCND2Q9NZV8 630 aa11.56□□□□□ -0.56
CLIP1-203ENST00000361654 ATP11BQ9Y2G3 1177 aa11.56□□□□□ -0.56
CLIP1-203ENST00000361654 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.56□□□□□ -0.56
CLIP1-203ENST00000361654 CHUKO15111 745 aa11.55□□□□□ -0.56
CLIP1-203ENST00000361654 GAS2O43903 313 aaKnown RBP11.55□□□□□ -0.56
CLIP1-203ENST00000361654 NDUFB10O96000 172 aa11.55□□□□□ -0.56
CLIP1-203ENST00000361654 ODC1P11926 461 aa11.55□□□□□ -0.56
CLIP1-203ENST00000361654 SLC11A2P49281 568 aa11.55□□□□□ -0.56
CLIP1-203ENST00000361654 KRT31Q15323 416 aa11.55□□□□□ -0.56
CLIP1-203ENST00000361654 CHSY1Q86X52 802 aa11.55□□□□□ -0.56
CLIP1-203ENST00000361654 TBC1D10CQ8IV04 446 aa11.55□□□□□ -0.56
CLIP1-203ENST00000361654 WDR48Q8TAF3 677 aa11.55□□□□□ -0.56
CLIP1-203ENST00000361654 RIN2Q8WYP3 895 aaPredicted RBP11.55□□□□□ -0.56
CLIP1-203ENST00000361654 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.55□□□□□ -0.56
CLIP1-203ENST00000361654 UNC45AQ9H3U1 944 aa11.55□□□□□ -0.56
CLIP1-203ENST00000361654 A2ML1A8K2U0 1454 aa11.55□□□□□ -0.56
CLIP1-203ENST00000361654 ARHGEF5Q12774 1597 aa11.55□□□□□ -0.56
CLIP1-203ENST00000361654 MAPK13O15264 365 aa11.55□□□□□ -0.56
CLIP1-203ENST00000361654 GFAPP14136 432 aa11.55□□□□□ -0.56
CLIP1-203ENST00000361654 LIG3P49916 1009 aa11.55□□□□□ -0.56
CLIP1-203ENST00000361654 CDH18Q13634 790 aa11.55□□□□□ -0.56
CLIP1-203ENST00000361654 EMC2Q15006 297 aa11.55□□□□□ -0.56
CLIP1-203ENST00000361654 MAPRE2Q15555 327 aa11.55□□□□□ -0.56
CLIP1-203ENST00000361654 BARGINQ6ZT62 677 aa11.55□□□□□ -0.56
CLIP1-203ENST00000361654 PPM1NQ8N819 430 aa11.55□□□□□ -0.56
CLIP1-203ENST00000361654 MYCBPQ99417 103 aaPredicted RBP11.55□□□□□ -0.56
CLIP1-203ENST00000361654 AP1M1Q9BXS5 423 aa11.55□□□□□ -0.56
CLIP1-203ENST00000361654 STARD7Q9NQZ5 370 aa11.55□□□□□ -0.56
CLIP1-203ENST00000361654 TSR3Q9UJK0 312 aaKnown RBP11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms