RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 SPATS2Q86XZ4 545 aaKnown RBP19.67■□□□□ 0.74
CLIP2-202ENST00000361545 GSPT2Q8IYD1 628 aaKnown RBP19.67■□□□□ 0.74
CLIP2-202ENST00000361545 THOC1Q96FV9 657 aaKnown RBP19.67■□□□□ 0.74
CLIP2-202ENST00000361545 PREX1Q8TCU6 1659 aa19.67■□□□□ 0.74
CLIP2-202ENST00000361545 ZC3H4Q9UPT8 1303 aaKnown RBP19.67■□□□□ 0.74
CLIP2-202ENST00000361545 IGSF9BQ9UPX0 1349 aa19.67■□□□□ 0.74
CLIP2-202ENST00000361545 RRN3P2A6NIE6 340 aa19.67■□□□□ 0.74
CLIP2-202ENST00000361545 HSD17B4P51659 736 aa19.67■□□□□ 0.74
CLIP2-202ENST00000361545 MGAT5BQ3V5L5 792 aa19.67■□□□□ 0.74
CLIP2-202ENST00000361545 FBXO16Q8IX29 292 aaPredicted RBP19.67■□□□□ 0.74
CLIP2-202ENST00000361545 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.67■□□□□ 0.744e-7■■■□□ 14.6
CLIP2-202ENST00000361545 CNOT10Q9H9A5 744 aaKnown RBP19.67■□□□□ 0.74
CLIP2-202ENST00000361545 GNGT2O14610 69 aa19.67■□□□□ 0.74
CLIP2-202ENST00000361545 RGL2O15211 777 aa19.67■□□□□ 0.74
CLIP2-202ENST00000361545 POU5F1BQ06416 359 aa19.67■□□□□ 0.74
CLIP2-202ENST00000361545 MMS22LQ6ZRQ5 1243 aa19.67■□□□□ 0.74
CLIP2-202ENST00000361545 SCG3Q8WXD2 468 aaKnown RBP19.67■□□□□ 0.74
CLIP2-202ENST00000361545 EPAS1Q99814 870 aa19.67■□□□□ 0.74
CLIP2-202ENST00000361545 STK33Q9BYT3 514 aa19.67■□□□□ 0.74
CLIP2-202ENST00000361545 BFARQ9NZS9 450 aa19.67■□□□□ 0.74
CLIP2-202ENST00000361545 C17orf102A2RUQ5 167 aa19.67■□□□□ 0.74
CLIP2-202ENST00000361545 E5RI56 91 aa19.67■□□□□ 0.74
CLIP2-202ENST00000361545 CFLARO15519 480 aa19.67■□□□□ 0.74
CLIP2-202ENST00000361545 HLA-DRAP01903 254 aa19.67■□□□□ 0.74
CLIP2-202ENST00000361545 VCAM1P19320 739 aa19.67■□□□□ 0.74
CLIP2-202ENST00000361545 TAP1Q03518 808 aa19.67■□□□□ 0.74
CLIP2-202ENST00000361545 TAS2R42Q7RTR8 314 aa19.67■□□□□ 0.74
CLIP2-202ENST00000361545 PDZD8Q8NEN9 1154 aa19.67■□□□□ 0.74
CLIP2-202ENST00000361545 RMDN2Q96LZ7 410 aa19.67■□□□□ 0.74
CLIP2-202ENST00000361545 VCX3AQ9NNX9 186 aa19.67■□□□□ 0.74
CLIP2-202ENST00000361545 GSTA4O15217 222 aa19.66■□□□□ 0.74
CLIP2-202ENST00000361545 ATP8B1O43520 1251 aa19.66■□□□□ 0.74
CLIP2-202ENST00000361545 UCHL3P15374 230 aa19.66■□□□□ 0.74
CLIP2-202ENST00000361545 TMPRSS15P98073 1019 aa19.66■□□□□ 0.74
CLIP2-202ENST00000361545 GRIN1Q05586 938 aa19.66■□□□□ 0.74
CLIP2-202ENST00000361545 ANGPTL8Q6UXH0 198 aa19.66■□□□□ 0.74
CLIP2-202ENST00000361545 SLC38A7Q9NVC3 462 aa19.66■□□□□ 0.74
CLIP2-202ENST00000361545 LIMA1Q9UHB6 759 aaKnown RBP19.66■□□□□ 0.74
CLIP2-202ENST00000361545 RASA4BC9J798 803 aa19.66■□□□□ 0.74
CLIP2-202ENST00000361545 APOL1O14791 398 aa19.66■□□□□ 0.74
CLIP2-202ENST00000361545 RASA4O43374 803 aa19.66■□□□□ 0.74
CLIP2-202ENST00000361545 FGFR2P21802 821 aa19.66■□□□□ 0.74
CLIP2-202ENST00000361545 FXR2P51116 673 aaKnown RBP eCLIP19.66■□□□□ 0.74
CLIP2-202ENST00000361545 GLE1Q53GS7 698 aaKnown RBP19.66■□□□□ 0.74
CLIP2-202ENST00000361545 TMCO4Q5TGY1 634 aa19.66■□□□□ 0.74
CLIP2-202ENST00000361545 CCDC137Q6PK04 289 aaKnown RBP19.66■□□□□ 0.74
CLIP2-202ENST00000361545 OPTNQ96CV9 577 aa19.66■□□□□ 0.74
CLIP2-202ENST00000361545 SPDL1Q96EA4 605 aa19.66■□□□□ 0.74
CLIP2-202ENST00000361545 PI4K2AQ9BTU6 479 aa19.66■□□□□ 0.74
CLIP2-202ENST00000361545 KLK14Q9P0G3 267 aa19.66■□□□□ 0.74
CLIP2-202ENST00000361545 UBA6A0AVT1 1052 aaPredicted RBP19.66■□□□□ 0.74
CLIP2-202ENST00000361545 CYBBP04839 570 aa19.66■□□□□ 0.74
CLIP2-202ENST00000361545 DCCP43146 1447 aa19.66■□□□□ 0.74
CLIP2-202ENST00000361545 PDIA2Q13087 525 aaKnown RBP19.66■□□□□ 0.74
CLIP2-202ENST00000361545 SEZ6Q53EL9 994 aa19.66■□□□□ 0.74
CLIP2-202ENST00000361545 SYCP2LQ5T4T6 812 aa19.66■□□□□ 0.74
CLIP2-202ENST00000361545 ATG16L1Q676U5 607 aa19.66■□□□□ 0.74
CLIP2-202ENST00000361545 NOTUMQ6P988 496 aa19.66■□□□□ 0.74
CLIP2-202ENST00000361545 DYRK4Q9NR20 520 aa19.66■□□□□ 0.74
CLIP2-202ENST00000361545 ANKEF1Q9NU02 776 aa19.66■□□□□ 0.74
CLIP2-202ENST00000361545 FAM133BQ5BKY9 247 aaKnown RBP19.66■□□□□ 0.74
CLIP2-202ENST00000361545 ZBED8Q8IZ13 594 aa19.66■□□□□ 0.74
CLIP2-202ENST00000361545 RRAGCQ9HB90 399 aa19.66■□□□□ 0.74
CLIP2-202ENST00000361545 TNS2Q63HR2 1409 aa19.65■□□□□ 0.74
CLIP2-202ENST00000361545 VEGFAP15692 232 aaPredicted RBP19.65■□□□□ 0.74
CLIP2-202ENST00000361545 CPSF2Q9P2I0 782 aaKnown RBP19.65■□□□□ 0.74
CLIP2-202ENST00000361545 ATP9BO43861 1147 aa19.65■□□□□ 0.74
CLIP2-202ENST00000361545 SLC9A1P19634 815 aa19.65■□□□□ 0.74
CLIP2-202ENST00000361545 USP27XA6NNY8 438 aa19.65■□□□□ 0.74
CLIP2-202ENST00000361545 C2CD2LO14523 706 aa19.65■□□□□ 0.74
CLIP2-202ENST00000361545 IL18RAPO95256 599 aa19.65■□□□□ 0.74
CLIP2-202ENST00000361545 IRF1P10914 325 aa19.65■□□□□ 0.74
CLIP2-202ENST00000361545 NOP14P78316 857 aaKnown RBP19.65■□□□□ 0.74
CLIP2-202ENST00000361545 NUGGCQ68CJ6 796 aa19.65■□□□□ 0.74
CLIP2-202ENST00000361545 DDX53Q86TM3 631 aaKnown RBP19.65■□□□□ 0.74
CLIP2-202ENST00000361545 AFF4Q9UHB7 1163 aaKnown RBP19.65■□□□□ 0.74
CLIP2-202ENST00000361545 FHOD1Q9Y613 1164 aa19.65■□□□□ 0.74
CLIP2-202ENST00000361545 POLR1AO95602 1720 aaPredicted RBP19.65■□□□□ 0.74
CLIP2-202ENST00000361545 CHRNA3P32297 505 aa19.65■□□□□ 0.74
CLIP2-202ENST00000361545 GLRA4Q5JXX5 417 aa19.65■□□□□ 0.74
CLIP2-202ENST00000361545 RAPGEF5Q92565 580 aa19.65■□□□□ 0.74
CLIP2-202ENST00000361545 CHP1Q99653 195 aa19.65■□□□□ 0.74
CLIP2-202ENST00000361545 SRRM1Q8IYB3 904 aaKnown RBP19.64■□□□□ 0.74
CLIP2-202ENST00000361545 NT5C1AQ9BXI3 368 aa19.64■□□□□ 0.74
CLIP2-202ENST00000361545 AGPAT5Q9NUQ2 364 aa19.64■□□□□ 0.74
CLIP2-202ENST00000361545 PCDHB7Q9Y5E2 793 aa19.64■□□□□ 0.74
CLIP2-202ENST00000361545 ART3Q13508 389 aa19.64■□□□□ 0.73
CLIP2-202ENST00000361545 GPRC5CQ9NQ84 441 aa19.64■□□□□ 0.73
CLIP2-202ENST00000361545 ARP10275 920 aa19.64■□□□□ 0.73
CLIP2-202ENST00000361545 ZFXP17010 805 aaPredicted RBP19.64■□□□□ 0.73
CLIP2-202ENST00000361545 STILQ15468 1287 aa19.64■□□□□ 0.73
CLIP2-202ENST00000361545 SV2CQ496J9 727 aa19.64■□□□□ 0.73
CLIP2-202ENST00000361545 MORC4Q8TE76 937 aa19.64■□□□□ 0.73
CLIP2-202ENST00000361545 MCEEQ96PE7 176 aa19.64■□□□□ 0.73
CLIP2-202ENST00000361545 LSM7Q9UK45 103 aaKnown RBP19.64■□□□□ 0.73
CLIP2-202ENST00000361545 TMX2Q9Y320 296 aa19.64■□□□□ 0.73
CLIP2-202ENST00000361545 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.64■□□□□ 0.73
CLIP2-202ENST00000361545 USP32Q8NFA0 1604 aa19.64■□□□□ 0.73
CLIP2-202ENST00000361545 EIF3EP60228 445 aaKnown RBP19.64■□□□□ 0.73
CLIP2-202ENST00000361545 KIF19Q2TAC6 998 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms