RNA–Protein interactions for RNA: ENST00000360642.7

CLCN3-202, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2 BASIC

Gene CLCN3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-202ENST00000360642 SOX13Q9UN79 622 aa7.99□□□□□ -1.13
CLCN3-202ENST00000360642 JRKLQ9Y4A0 524 aa7.99□□□□□ -1.13
CLCN3-202ENST00000360642 SSU72P8A0A1W2PR75 194 aa7.99□□□□□ -1.13
CLCN3-202ENST00000360642 MACROD2A1Z1Q3 448 aa7.99□□□□□ -1.13
CLCN3-202ENST00000360642 CYP11B2P19099 503 aa7.99□□□□□ -1.13
CLCN3-202ENST00000360642 HMGB2P26583 209 aaKnown RBP7.99□□□□□ -1.13
CLCN3-202ENST00000360642 ARNTP27540 789 aa7.99□□□□□ -1.13
CLCN3-202ENST00000360642 SLC1A4P43007 532 aa7.99□□□□□ -1.13
CLCN3-202ENST00000360642 TMPRSS15P98073 1019 aa7.99□□□□□ -1.13
CLCN3-202ENST00000360642 CKAP4Q07065 602 aaKnown RBP7.99□□□□□ -1.13
CLCN3-202ENST00000360642 AP3B2Q13367 1082 aa7.99□□□□□ -1.13
CLCN3-202ENST00000360642 CASP8Q14790 479 aa7.99□□□□□ -1.13
CLCN3-202ENST00000360642 CDC37Q16543 378 aaPredicted RBP7.99□□□□□ -1.13
CLCN3-202ENST00000360642 CERKLQ49MI3 558 aaPredicted RBP7.99□□□□□ -1.13
CLCN3-202ENST00000360642 SLFN13Q68D06 897 aa7.99□□□□□ -1.13
CLCN3-202ENST00000360642 RRAGAQ7L523 313 aa7.99□□□□□ -1.13
CLCN3-202ENST00000360642 COL23A1Q86Y22 540 aaPredicted RBP7.99□□□□□ -1.13
CLCN3-202ENST00000360642 CREG2Q8IUH2 290 aa7.99□□□□□ -1.13
CLCN3-202ENST00000360642 MICALL1Q8N3F8 863 aa7.99□□□□□ -1.13
CLCN3-202ENST00000360642 CCDC155Q8N6L0 562 aa7.99□□□□□ -1.13
CLCN3-202ENST00000360642 ETNPPLQ8TBG4 499 aa7.99□□□□□ -1.13
CLCN3-202ENST00000360642 SCFD1Q8WVM8 642 aa7.99□□□□□ -1.13
CLCN3-202ENST00000360642 SYN2Q92777 582 aaPredicted RBP7.99□□□□□ -1.13
CLCN3-202ENST00000360642 MASTLQ96GX5 879 aa7.99□□□□□ -1.13
CLCN3-202ENST00000360642 SPATA9Q9BWV2 254 aa7.99□□□□□ -1.13
CLCN3-202ENST00000360642 ANO3Q9BYT9 981 aa7.99□□□□□ -1.13
CLCN3-202ENST00000360642 PDE11AQ9HCR9 933 aa7.99□□□□□ -1.13
CLCN3-202ENST00000360642 CAPN6Q9Y6Q1 641 aa7.99□□□□□ -1.13
CLCN3-202ENST00000360642 PITPNM2Q9BZ72 1349 aa7.99□□□□□ -1.13
CLCN3-202ENST00000360642 SLC22A31A6NKX4 558 aa7.99□□□□□ -1.13
CLCN3-202ENST00000360642 ZNF185O15231 689 aa7.99□□□□□ -1.13
CLCN3-202ENST00000360642 USO1O60763 962 aaKnown RBP7.99□□□□□ -1.13
CLCN3-202ENST00000360642 MED24O75448 989 aa7.99□□□□□ -1.13
CLCN3-202ENST00000360642 GNA14O95837 355 aa7.99□□□□□ -1.13
CLCN3-202ENST00000360642 MAOBP27338 520 aa7.99□□□□□ -1.13
CLCN3-202ENST00000360642 MMP14P50281 582 aa7.99□□□□□ -1.13
CLCN3-202ENST00000360642 NRLP54845 237 aa7.99□□□□□ -1.13
CLCN3-202ENST00000360642 PCBP1Q15365 356 aaKnown RBP eCLIP7.99□□□□□ -1.13
CLCN3-202ENST00000360642 Q4G0T1 1027 aa7.99□□□□□ -1.13
CLCN3-202ENST00000360642 STRIP1Q5VSL9 837 aa7.99□□□□□ -1.13
CLCN3-202ENST00000360642 PSAPL1Q6NUJ1 521 aa7.99□□□□□ -1.13
CLCN3-202ENST00000360642 NLRC3Q7RTR2 1065 aa7.99□□□□□ -1.13
CLCN3-202ENST00000360642 KRT27Q7Z3Y8 459 aa7.99□□□□□ -1.13
CLCN3-202ENST00000360642 CCDC65Q8IXS2 484 aa7.99□□□□□ -1.13
CLCN3-202ENST00000360642 SLFN12Q8IYM2 578 aa7.99□□□□□ -1.13
CLCN3-202ENST00000360642 CHAC2Q8WUX2 184 aa7.99□□□□□ -1.13
CLCN3-202ENST00000360642 MFSD3Q96ES6 412 aa7.99□□□□□ -1.13
CLCN3-202ENST00000360642 CEP89Q96ST8 783 aa7.99□□□□□ -1.13
CLCN3-202ENST00000360642 PSD3Q9NYI0 1048 aa7.99□□□□□ -1.13
CLCN3-202ENST00000360642 SNX12Q9UMY4 172 aa7.99□□□□□ -1.13
CLCN3-202ENST00000360642 BRWD3Q6RI45 1802 aa7.99□□□□□ -1.13
CLCN3-202ENST00000360642 ATAD5Q96QE3 1844 aa7.99□□□□□ -1.13
CLCN3-202ENST00000360642 NPHP3-ACAD11A0A0J9YXS1 232 aa7.98□□□□□ -1.13
CLCN3-202ENST00000360642 LINC01387J3KSC0 135 aa7.98□□□□□ -1.13
CLCN3-202ENST00000360642 TBX3O15119 743 aa7.98□□□□□ -1.13
CLCN3-202ENST00000360642 CACNB3P54284 484 aa7.98□□□□□ -1.13
CLCN3-202ENST00000360642 PPP2R2AP63151 447 aa7.98□□□□□ -1.13
CLCN3-202ENST00000360642 ITIH3Q06033 890 aa7.98□□□□□ -1.13
CLCN3-202ENST00000360642 PRSS53Q2L4Q9 553 aa7.98□□□□□ -1.13
CLCN3-202ENST00000360642 DACT2Q5SW24 774 aa7.98□□□□□ -1.13
CLCN3-202ENST00000360642 TRIM59Q8IWR1 403 aa7.98□□□□□ -1.13
CLCN3-202ENST00000360642 GMCL1P1Q8NEA9 526 aa7.98□□□□□ -1.13
CLCN3-202ENST00000360642 NEK11Q8NG66 645 aa7.98□□□□□ -1.13
CLCN3-202ENST00000360642 SMCR8Q8TEV9 937 aaPredicted RBP7.98□□□□□ -1.13
CLCN3-202ENST00000360642 LENG9Q96B70 501 aa7.98□□□□□ -1.13
CLCN3-202ENST00000360642 DBNDD1Q9H9R9 158 aa7.98□□□□□ -1.13
CLCN3-202ENST00000360642 CEP72Q9P209 647 aa7.98□□□□□ -1.13
CLCN3-202ENST00000360642 TRAF6Q9Y4K3 522 aa7.98□□□□□ -1.13
CLCN3-202ENST00000360642 LRRIQ3A6PVS8 624 aaPredicted RBP7.98□□□□□ -1.13
CLCN3-202ENST00000360642 TRAF5O00463 557 aa7.98□□□□□ -1.13
CLCN3-202ENST00000360642 SMNDC1O75940 238 aaKnown RBP eCLIP7.98□□□□□ -1.13
CLCN3-202ENST00000360642 MCM3P25205 808 aa7.98□□□□□ -1.13
CLCN3-202ENST00000360642 TCP10Q12799 353 aa7.98□□□□□ -1.13
CLCN3-202ENST00000360642 MCTP2Q6DN12 878 aa7.98□□□□□ -1.13
CLCN3-202ENST00000360642 PKN3Q6P5Z2 889 aa7.98□□□□□ -1.13
CLCN3-202ENST00000360642 CATSPER3Q86XQ3 398 aa7.98□□□□□ -1.13
CLCN3-202ENST00000360642 EXOC4Q96A65 974 aa7.98□□□□□ -1.13
CLCN3-202ENST00000360642 GMCL1Q96IK5 515 aa7.98□□□□□ -1.13
CLCN3-202ENST00000360642 CAPZA3Q96KX2 299 aa7.98□□□□□ -1.13
CLCN3-202ENST00000360642 VIPAS39Q9H9C1 493 aa7.98□□□□□ -1.13
CLCN3-202ENST00000360642 ADAM21Q9UKJ8 722 aa7.98□□□□□ -1.13
CLCN3-202ENST00000360642 GFRA2O00451 464 aa7.97□□□□□ -1.13
CLCN3-202ENST00000360642 TLR2O60603 784 aa7.97□□□□□ -1.13
CLCN3-202ENST00000360642 TACC1O75410 805 aa7.97□□□□□ -1.13
CLCN3-202ENST00000360642 SPATA31C1P0DKV0 1188 aa7.97□□□□□ -1.13
CLCN3-202ENST00000360642 GPS2Q13227 327 aa7.97□□□□□ -1.13
CLCN3-202ENST00000360642 EDRF1Q3B7T1 1238 aa7.97□□□□□ -1.13
CLCN3-202ENST00000360642 TMEM179Q6ZVK1 233 aa7.97□□□□□ -1.13
CLCN3-202ENST00000360642 GPBP1Q86WP2 473 aa7.97□□□□□ -1.13
CLCN3-202ENST00000360642 NINJ1Q92982 152 aa7.97□□□□□ -1.13
CLCN3-202ENST00000360642 LPIN3Q9BQK8 851 aa7.97□□□□□ -1.13
CLCN3-202ENST00000360642 EHMT1Q9H9B1 1298 aa7.97□□□□□ -1.13
CLCN3-202ENST00000360642 MLXIPQ9HAP2 919 aa7.97□□□□□ -1.13
CLCN3-202ENST00000360642 TBC1D7Q9P0N9 293 aa7.97□□□□□ -1.13
CLCN3-202ENST00000360642 CYP8B1Q9UNU6 501 aa7.97□□□□□ -1.13
CLCN3-202ENST00000360642 SCN9AQ15858 1988 aa7.97□□□□□ -1.13
CLCN3-202ENST00000360642 F5H6K3 240 aa7.97□□□□□ -1.13
CLCN3-202ENST00000360642 AKR1B10O60218 316 aa7.97□□□□□ -1.13
CLCN3-202ENST00000360642 N4BP1O75113 896 aaKnown RBP7.97□□□□□ -1.13
CLCN3-202ENST00000360642 EIF3JO75822 258 aaKnown RBP7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms