RNA–Protein interactions for RNA: ENST00000359867.7

CSNK1E-201, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-201ENST00000359867 GFPT1Q06210 699 aaPredicted RBP14.97□□□□□ -0.01
CSNK1E-201ENST00000359867 PPFIA1Q13136 1202 aa14.97□□□□□ -0.01
CSNK1E-201ENST00000359867 KCNA10Q16322 511 aa14.97□□□□□ -0.01
CSNK1E-201ENST00000359867 HSP90B2PQ58FF3 399 aa14.97□□□□□ -0.01
CSNK1E-201ENST00000359867 RNF10Q8N5U6 811 aaKnown RBP14.97□□□□□ -0.01
CSNK1E-201ENST00000359867 CBWD1Q9BRT8 395 aa14.97□□□□□ -0.01
CSNK1E-201ENST00000359867 SETD4Q9NVD3 440 aa14.97□□□□□ -0.01
CSNK1E-201ENST00000359867 PSD3Q9NYI0 1048 aa14.97□□□□□ -0.01
CSNK1E-201ENST00000359867 FRMPD3Q5JV73 1810 aa14.97□□□□□ -0.01
CSNK1E-201ENST00000359867 KAT6AQ92794 2004 aa14.97□□□□□ -0.01
CSNK1E-201ENST00000359867 EVPLQ92817 2033 aa14.97□□□□□ -0.01
CSNK1E-201ENST00000359867 MKI67P46013 3256 aaKnown RBP14.97□□□□□ -0.01
CSNK1E-201ENST00000359867 DENND3A2RUS2 1198 aa14.96□□□□□ -0.01
CSNK1E-201ENST00000359867 PSEN2P49810 448 aa14.96□□□□□ -0.01
CSNK1E-201ENST00000359867 MYL7Q01449 175 aa14.96□□□□□ -0.01
CSNK1E-201ENST00000359867 SATB1Q01826 763 aa14.96□□□□□ -0.01
CSNK1E-201ENST00000359867 CETN1Q12798 172 aa14.96□□□□□ -0.01
CSNK1E-201ENST00000359867 RIN2Q8WYP3 895 aaPredicted RBP14.96□□□□□ -0.01
CSNK1E-201ENST00000359867 BSNDQ8WZ55 320 aa14.96□□□□□ -0.01
CSNK1E-201ENST00000359867 VTI1AQ96AJ9 217 aa14.96□□□□□ -0.01
CSNK1E-201ENST00000359867 PCIF1Q9H4Z3 704 aa14.96□□□□□ -0.01
CSNK1E-201ENST00000359867 SMIM10L2AP0DMW4 78 aa14.96□□□□□ -0.01
CSNK1E-201ENST00000359867 SMIM10L2BP0DMW5 78 aa14.96□□□□□ -0.01
CSNK1E-201ENST00000359867 FERP16591 822 aa14.96□□□□□ -0.01
CSNK1E-201ENST00000359867 HIC1Q14526 733 aa14.96□□□□□ -0.01
CSNK1E-201ENST00000359867 GRIK4Q16099 956 aa14.96□□□□□ -0.01
CSNK1E-201ENST00000359867 CBWD6Q4V339 395 aa14.96□□□□□ -0.01
CSNK1E-201ENST00000359867 CBWD3Q5JTY5 395 aa14.96□□□□□ -0.01
CSNK1E-201ENST00000359867 CBWD5Q5RIA9 395 aa14.96□□□□□ -0.01
CSNK1E-201ENST00000359867 TRAPPC11Q7Z392 1133 aa14.96□□□□□ -0.01
CSNK1E-201ENST00000359867 KLHDC9Q8NEP7 349 aa14.96□□□□□ -0.01
CSNK1E-201ENST00000359867 DEFB118Q96PH6 123 aa14.96□□□□□ -0.01
CSNK1E-201ENST00000359867 KIFC3Q9BVG8 833 aa14.96□□□□□ -0.01
CSNK1E-201ENST00000359867 STK33Q9BYT3 514 aa14.96□□□□□ -0.01
CSNK1E-201ENST00000359867 RNF208Q9H0X6 261 aa14.96□□□□□ -0.01
CSNK1E-201ENST00000359867 FAM204AQ9H8W3 233 aa14.96□□□□□ -0.01
CSNK1E-201ENST00000359867 PPME1Q9Y570 386 aa14.96□□□□□ -0.01
CSNK1E-201ENST00000359867 DUSP10Q9Y6W6 482 aa14.96□□□□□ -0.01
CSNK1E-201ENST00000359867 ZNF185O15231 689 aa14.96□□□□□ -0.02
CSNK1E-201ENST00000359867 MAFO75444 373 aaPredicted RBP14.96□□□□□ -0.02
CSNK1E-201ENST00000359867 GJB1P08034 283 aa14.96□□□□□ -0.02
CSNK1E-201ENST00000359867 TRIM49P0CI25 452 aa14.96□□□□□ -0.02
CSNK1E-201ENST00000359867 TRIM49CP0CI26 452 aa14.96□□□□□ -0.02
CSNK1E-201ENST00000359867 STAT1P42224 750 aa14.96□□□□□ -0.02
CSNK1E-201ENST00000359867 MAGEA9P43362 315 aa14.96□□□□□ -0.02
CSNK1E-201ENST00000359867 CLCN3P51790 818 aa14.96□□□□□ -0.02
CSNK1E-201ENST00000359867 GSCP56915 257 aaPredicted RBP14.96□□□□□ -0.02
CSNK1E-201ENST00000359867 ENPEPQ07075 957 aa14.96□□□□□ -0.02
CSNK1E-201ENST00000359867 IQCEQ6IPM2 695 aa14.96□□□□□ -0.02
CSNK1E-201ENST00000359867 CCSAPQ6IQ19 270 aaPredicted RBP14.96□□□□□ -0.02
CSNK1E-201ENST00000359867 METTL13Q8N6R0 699 aa14.96□□□□□ -0.02
CSNK1E-201ENST00000359867 RDH13Q8NBN7 331 aa14.96□□□□□ -0.02
CSNK1E-201ENST00000359867 LMBR1Q8WVP7 490 aa14.96□□□□□ -0.02
CSNK1E-201ENST00000359867 INTS2Q9H0H0 1204 aaKnown RBP14.96□□□□□ -0.02
CSNK1E-201ENST00000359867 POLR3FQ9H1D9 316 aaPredicted RBP14.96□□□□□ -0.02
CSNK1E-201ENST00000359867 ATP8B3O60423 1300 aa14.95□□□□□ -0.02
CSNK1E-201ENST00000359867 MACROD2A1Z1Q3 448 aa14.95□□□□□ -0.02
CSNK1E-201ENST00000359867 HAS3O00219 553 aa14.95□□□□□ -0.02
CSNK1E-201ENST00000359867 MSCO60682 206 aa14.95□□□□□ -0.02
CSNK1E-201ENST00000359867 C22orf31O95567 290 aa14.95□□□□□ -0.02
CSNK1E-201ENST00000359867 CCL5P13501 91 aa14.95□□□□□ -0.02
CSNK1E-201ENST00000359867 KLRC1P26715 233 aa14.95□□□□□ -0.02
CSNK1E-201ENST00000359867 FBXO46Q6PJ61 603 aaPredicted RBP14.95□□□□□ -0.02
CSNK1E-201ENST00000359867 ZNF668Q96K58 619 aaPredicted RBP14.95□□□□□ -0.02
CSNK1E-201ENST00000359867 ALS2CR12Q96Q35 445 aa14.95□□□□□ -0.02
CSNK1E-201ENST00000359867 TISP43B9A030 160 aa14.95□□□□□ -0.02
CSNK1E-201ENST00000359867 GFPT2O94808 682 aa14.95□□□□□ -0.02
CSNK1E-201ENST00000359867 RFC5P40937 340 aa14.95□□□□□ -0.02
CSNK1E-201ENST00000359867 ZNF200P98182 395 aaPredicted RBP14.95□□□□□ -0.02
CSNK1E-201ENST00000359867 ARID5AQ03989 594 aa14.95□□□□□ -0.02
CSNK1E-201ENST00000359867 MKRN4PQ13434 485 aaPredicted RBP14.95□□□□□ -0.02
CSNK1E-201ENST00000359867 MARCH8Q5T0T0 291 aa14.95□□□□□ -0.02
CSNK1E-201ENST00000359867 RNF180Q86T96 592 aa14.95□□□□□ -0.02
CSNK1E-201ENST00000359867 MTG1Q9BT17 334 aaPredicted RBP14.95□□□□□ -0.02
CSNK1E-201ENST00000359867 PAK6Q9NQU5 681 aaPredicted RBP14.95□□□□□ -0.02
CSNK1E-201ENST00000359867 ARHGAP28Q9P2N2 729 aa14.95□□□□□ -0.02
CSNK1E-201ENST00000359867 APEX2Q9UBZ4 518 aa14.95□□□□□ -0.02
CSNK1E-201ENST00000359867 USP20Q9Y2K6 914 aa14.95□□□□□ -0.02
CSNK1E-201ENST00000359867 SAR1BQ9Y6B6 198 aa14.95□□□□□ -0.02
CSNK1E-201ENST00000359867 TRIP12Q14669 1992 aaPredicted RBP14.94□□□□□ -0.02
CSNK1E-201ENST00000359867 SCN10AQ9Y5Y9 1956 aa14.94□□□□□ -0.02
CSNK1E-201ENST00000359867 NKX3-2P78367 333 aa14.94□□□□□ -0.02
CSNK1E-201ENST00000359867 MRPS25P82663 173 aaKnown RBP14.94□□□□□ -0.02
CSNK1E-201ENST00000359867 PTK2Q05397 1052 aa14.94□□□□□ -0.02
CSNK1E-201ENST00000359867 ZNF484Q5JVG2 852 aa14.94□□□□□ -0.02
CSNK1E-201ENST00000359867 VPS36Q86VN1 386 aa14.94□□□□□ -0.02
CSNK1E-201ENST00000359867 LMO3Q8TAP4 145 aa14.94□□□□□ -0.02
CSNK1E-201ENST00000359867 ASAP3Q8TDY4 903 aa14.94□□□□□ -0.02
CSNK1E-201ENST00000359867 FBXL18Q96ME1 805 aa14.94□□□□□ -0.02
CSNK1E-201ENST00000359867 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.94□□□□□ -0.02
CSNK1E-201ENST00000359867 ADAMTS1Q9UHI8 967 aa14.94□□□□□ -0.02
CSNK1E-201ENST00000359867 DNAJC12Q9UKB3 198 aa14.94□□□□□ -0.02
CSNK1E-201ENST00000359867 A0A087X0T9 212 aa14.94□□□□□ -0.02
CSNK1E-201ENST00000359867 CCDC189A1A4V9 331 aa14.94□□□□□ -0.02
CSNK1E-201ENST00000359867 BTNL10A8MVZ5 291 aa14.94□□□□□ -0.02
CSNK1E-201ENST00000359867 ANKRD63C9JTQ0 380 aa14.94□□□□□ -0.02
CSNK1E-201ENST00000359867 RNF40O75150 1001 aa14.94□□□□□ -0.02
CSNK1E-201ENST00000359867 FAM228BP0C875 321 aa14.94□□□□□ -0.02
CSNK1E-201ENST00000359867 GARTP22102 1010 aa14.94□□□□□ -0.02
CSNK1E-201ENST00000359867 CST5P28325 142 aaPredicted RBP14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 105.5 ms