RNA–Protein interactions for RNA: ENST00000359683.8

NIF3L1-201, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,626 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-201ENST00000359683 AKAP5P24588 427 aa13.49□□□□□ -0.25
NIF3L1-201ENST00000359683 MARSP56192 900 aaKnown RBP13.49□□□□□ -0.25
NIF3L1-201ENST00000359683 ENPEPQ07075 957 aa13.49□□□□□ -0.25
NIF3L1-201ENST00000359683 XKR4Q5GH76 650 aa13.49□□□□□ -0.25
NIF3L1-201ENST00000359683 CDKAL1Q5VV42 579 aa13.49□□□□□ -0.25
NIF3L1-201ENST00000359683 ALKAL1Q6UXT8 129 aa13.49□□□□□ -0.25
NIF3L1-201ENST00000359683 OTOP2Q7RTS6 562 aa13.49□□□□□ -0.25
NIF3L1-201ENST00000359683 FRMD5Q7Z6J6 570 aa13.49□□□□□ -0.25
NIF3L1-201ENST00000359683 LUZP1Q86V48 1076 aa13.49□□□□□ -0.25
NIF3L1-201ENST00000359683 BRSK2Q8IWQ3 736 aa13.49□□□□□ -0.25
NIF3L1-201ENST00000359683 FAM186BQ8IYM0 893 aa13.49□□□□□ -0.25
NIF3L1-201ENST00000359683 HERVK_113Q902F9 699 aa13.49□□□□□ -0.25
NIF3L1-201ENST00000359683 RPF1Q9H9Y2 349 aaKnown RBP13.49□□□□□ -0.25
NIF3L1-201ENST00000359683 PLEKHA5Q9HAU0 1116 aa13.49□□□□□ -0.25
NIF3L1-201ENST00000359683 GIT1Q9Y2X7 761 aa13.49□□□□□ -0.25
NIF3L1-201ENST00000359683 TTC26A0AVF1 554 aa13.48□□□□□ -0.25
NIF3L1-201ENST00000359683 MEIS3P2A8K0S8 358 aa13.48□□□□□ -0.25
NIF3L1-201ENST00000359683 RECQL4O94761 1208 aa13.48□□□□□ -0.25
NIF3L1-201ENST00000359683 CXCL8P10145 99 aa13.48□□□□□ -0.25
NIF3L1-201ENST00000359683 ZNF18P17022 549 aa13.48□□□□□ -0.25
NIF3L1-201ENST00000359683 WDR5P61964 334 aaKnown RBP13.48□□□□□ -0.25
NIF3L1-201ENST00000359683 CYP24A1Q07973 514 aa13.48□□□□□ -0.25
NIF3L1-201ENST00000359683 PSMD6Q15008 389 aa13.48□□□□□ -0.25
NIF3L1-201ENST00000359683 NPAS4Q8IUM7 802 aa13.48□□□□□ -0.25
NIF3L1-201ENST00000359683 FAM114A1Q8IWE2 563 aa13.48□□□□□ -0.25
NIF3L1-201ENST00000359683 CD302Q8IX05 232 aa13.48□□□□□ -0.25
NIF3L1-201ENST00000359683 TMC2Q8TDI7 906 aa13.48□□□□□ -0.25
NIF3L1-201ENST00000359683 LPPQ93052 612 aa13.48□□□□□ -0.25
NIF3L1-201ENST00000359683 APOL6Q9BWW8 343 aa13.48□□□□□ -0.25
NIF3L1-201ENST00000359683 ASB7Q9H672 318 aa13.48□□□□□ -0.25
NIF3L1-201ENST00000359683 METTL14Q9HCE5 456 aaKnown RBP13.48□□□□□ -0.25
NIF3L1-201ENST00000359683 UBN1Q9NPG3 1134 aa13.48□□□□□ -0.25
NIF3L1-201ENST00000359683 MTMR10Q9NXD2 777 aa13.48□□□□□ -0.25
NIF3L1-201ENST00000359683 RBAKQ9NYW8 714 aaPredicted RBP13.48□□□□□ -0.25
NIF3L1-201ENST00000359683 PARP2Q9UGN5 583 aa13.48□□□□□ -0.25
NIF3L1-201ENST00000359683 PCDHB7Q9Y5E2 793 aa13.48□□□□□ -0.25
NIF3L1-201ENST00000359683 LACTBL1A8MY62 500 aa13.47□□□□□ -0.25
NIF3L1-201ENST00000359683 YARSP54577 528 aaKnown RBP13.47□□□□□ -0.25
NIF3L1-201ENST00000359683 WNT7BP56706 349 aa13.47□□□□□ -0.25
NIF3L1-201ENST00000359683 SURF1Q15526 300 aa13.47□□□□□ -0.25
NIF3L1-201ENST00000359683 INTS8Q75QN2 995 aaKnown RBP13.47□□□□□ -0.25
NIF3L1-201ENST00000359683 PLEKHO2Q8TD55 490 aa13.47□□□□□ -0.25
NIF3L1-201ENST00000359683 PARD3BQ8TEW8 1205 aa13.47□□□□□ -0.25
NIF3L1-201ENST00000359683 TOP1MTQ969P6 601 aa13.47□□□□□ -0.25
NIF3L1-201ENST00000359683 SNX27Q96L92 541 aa13.47□□□□□ -0.25
NIF3L1-201ENST00000359683 RBSNQ9H1K0 784 aa13.47□□□□□ -0.25
NIF3L1-201ENST00000359683 TOPORSQ9NS56 1045 aaPredicted RBP13.47□□□□□ -0.25
NIF3L1-201ENST00000359683 RNF19AQ9NV58 838 aa13.47□□□□□ -0.25
NIF3L1-201ENST00000359683 ARMCX3Q9UH62 379 aaPredicted RBP13.47□□□□□ -0.25
NIF3L1-201ENST00000359683 INPPL1O15357 1258 aa13.46□□□□□ -0.25
NIF3L1-201ENST00000359683 OFD1O75665 1012 aa13.46□□□□□ -0.25
NIF3L1-201ENST00000359683 IL18RAPO95256 599 aa13.46□□□□□ -0.25
NIF3L1-201ENST00000359683 AMHP03971 560 aa13.46□□□□□ -0.25
NIF3L1-201ENST00000359683 KCNE1P15382 129 aa13.46□□□□□ -0.25
NIF3L1-201ENST00000359683 EEF1GP26641 437 aaKnown RBP13.46□□□□□ -0.25
NIF3L1-201ENST00000359683 CLDN10P78369 228 aa13.46□□□□□ -0.25
NIF3L1-201ENST00000359683 CCDC40Q4G0X9 1142 aa13.46□□□□□ -0.25
NIF3L1-201ENST00000359683 TCP11X2Q5H9J9 407 aa13.46□□□□□ -0.25
NIF3L1-201ENST00000359683 RASIP1Q5U651 963 aa13.46□□□□□ -0.25
NIF3L1-201ENST00000359683 TRIM59Q8IWR1 403 aa13.46□□□□□ -0.25
NIF3L1-201ENST00000359683 RNF169Q8NCN4 708 aa13.46□□□□□ -0.25
NIF3L1-201ENST00000359683 RNF214Q8ND24 703 aa13.46□□□□□ -0.25
NIF3L1-201ENST00000359683 GSTCDQ8NEC7 633 aa13.46□□□□□ -0.25
NIF3L1-201ENST00000359683 CNOT6LQ96LI5 555 aaKnown RBP13.46□□□□□ -0.25
NIF3L1-201ENST00000359683 TSPAN18Q96SJ8 248 aa13.46□□□□□ -0.25
NIF3L1-201ENST00000359683 GAD1Q99259 594 aa13.46□□□□□ -0.25
NIF3L1-201ENST00000359683 CXCL16Q9H2A7 254 aa13.46□□□□□ -0.25
NIF3L1-201ENST00000359683 RSAD1Q9HA92 442 aa13.46□□□□□ -0.25
NIF3L1-201ENST00000359683 PDE11AQ9HCR9 933 aa13.46□□□□□ -0.25
NIF3L1-201ENST00000359683 KLK14Q9P0G3 267 aa13.46□□□□□ -0.25
NIF3L1-201ENST00000359683 CXXC1Q9P0U4 656 aaPredicted RBP13.46□□□□□ -0.25
NIF3L1-201ENST00000359683 CNTN3Q9P232 1028 aa13.46□□□□□ -0.25
NIF3L1-201ENST00000359683 LRFN2Q9ULH4 789 aa13.46□□□□□ -0.25
NIF3L1-201ENST00000359683 STXBP5LQ9Y2K9 1186 aa13.46□□□□□ -0.25
NIF3L1-201ENST00000359683 CITO14578 2027 aa13.46□□□□□ -0.25
NIF3L1-201ENST00000359683 COL6A3P12111 3177 aa13.46□□□□□ -0.25
NIF3L1-201ENST00000359683 ARL5CA6NH57 179 aa13.46□□□□□ -0.26
NIF3L1-201ENST00000359683 LRRC10BA6NIK2 292 aa13.46□□□□□ -0.26
NIF3L1-201ENST00000359683 KCNJ18B7U540 433 aa13.46□□□□□ -0.26
NIF3L1-201ENST00000359683 GOLGA6L19H0YKK7 550 aa13.46□□□□□ -0.26
NIF3L1-201ENST00000359683 KRT13P13646 458 aa13.46□□□□□ -0.26
NIF3L1-201ENST00000359683 VAMP7P51809 220 aa13.46□□□□□ -0.26
NIF3L1-201ENST00000359683 DEFB103AP81534 67 aa13.46□□□□□ -0.26
NIF3L1-201ENST00000359683 BFSP1Q12934 665 aa13.46□□□□□ -0.26
NIF3L1-201ENST00000359683 KCNJ12Q14500 433 aa13.46□□□□□ -0.26
NIF3L1-201ENST00000359683 ZBTB6Q15916 424 aa13.46□□□□□ -0.26
NIF3L1-201ENST00000359683 HSP90AA4PQ58FG1 418 aa13.46□□□□□ -0.26
NIF3L1-201ENST00000359683 CLLU1OSQ5K130 101 aa13.46□□□□□ -0.26
NIF3L1-201ENST00000359683 C1orf220Q5T0J3 134 aa13.46□□□□□ -0.26
NIF3L1-201ENST00000359683 CCDC127Q96BQ5 260 aa13.46□□□□□ -0.26
NIF3L1-201ENST00000359683 FAM212AQ96EL1 285 aa13.46□□□□□ -0.26
NIF3L1-201ENST00000359683 MIOSQ9NXC5 875 aa13.46□□□□□ -0.26
NIF3L1-201ENST00000359683 MAGEC2Q9UBF1 373 aaPredicted RBP13.46□□□□□ -0.26
NIF3L1-201ENST00000359683 SMIM28A0A1B0GU29 152 aa13.45□□□□□ -0.26
NIF3L1-201ENST00000359683 ZBBXA8MT70 800 aa13.45□□□□□ -0.26
NIF3L1-201ENST00000359683 HOXA2O43364 376 aa13.45□□□□□ -0.26
NIF3L1-201ENST00000359683 DGKIO75912 1065 aa13.45□□□□□ -0.26
NIF3L1-201ENST00000359683 IBSPP21815 317 aaPredicted RBP13.45□□□□□ -0.26
NIF3L1-201ENST00000359683 KCNJ6P48051 423 aa13.45□□□□□ -0.26
NIF3L1-201ENST00000359683 AFF1P51825 1210 aaKnown RBP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms