RNA–Protein interactions for RNA: ENST00000359031.8

GABPB1-202, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5 BASIC

Gene GABPB1, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-202ENST00000359031 FMO1Q01740 532 aa16.02■□□□□ 0.16
GABPB1-202ENST00000359031 PAK2Q13177 524 aa16.02■□□□□ 0.16
GABPB1-202ENST00000359031 CAPSQ13938 189 aa16.02■□□□□ 0.16
GABPB1-202ENST00000359031 ZACNQ401N2 412 aa16.02■□□□□ 0.16
GABPB1-202ENST00000359031 SHCBP1Q8NEM2 672 aa16.02■□□□□ 0.16
GABPB1-202ENST00000359031 MORC4Q8TE76 937 aa16.02■□□□□ 0.16
GABPB1-202ENST00000359031 TCP11Q8WWU5 503 aa16.02■□□□□ 0.16
GABPB1-202ENST00000359031 CARD9Q9H257 536 aa16.02■□□□□ 0.16
GABPB1-202ENST00000359031 GBA2Q9HCG7 927 aaPredicted RBP16.02■□□□□ 0.16
GABPB1-202ENST00000359031 TXNRD2Q9NNW7 524 aa16.02■□□□□ 0.16
GABPB1-202ENST00000359031 RBPJLQ9UBG7 517 aa16.02■□□□□ 0.16
GABPB1-202ENST00000359031 A0A0B4J269 797 aa16.01■□□□□ 0.15
GABPB1-202ENST00000359031 MIF4GDA9UHW6 222 aaKnown RBP16.01■□□□□ 0.15
GABPB1-202ENST00000359031 DDX3YO15523 660 aaKnown RBP16.01■□□□□ 0.15
GABPB1-202ENST00000359031 EFNA5P52803 228 aa16.01■□□□□ 0.15
GABPB1-202ENST00000359031 NLRP11P59045 1033 aaKnown RBP16.01■□□□□ 0.15
GABPB1-202ENST00000359031 CELF3Q5SZQ8 465 aaKnown RBP16.01■□□□□ 0.15
GABPB1-202ENST00000359031 TAF3Q5VWG9 929 aa16.01■□□□□ 0.15
GABPB1-202ENST00000359031 IER5Q5VY09 327 aa16.01■□□□□ 0.15
GABPB1-202ENST00000359031 ZPBP2Q6X784 338 aa16.01■□□□□ 0.15
GABPB1-202ENST00000359031 MOB2Q70IA6 237 aa16.01■□□□□ 0.15
GABPB1-202ENST00000359031 PLPPR4Q7Z2D5 763 aa16.01■□□□□ 0.15
GABPB1-202ENST00000359031 SLC47A2Q86VL8 602 aa16.01■□□□□ 0.15
GABPB1-202ENST00000359031 EIF1ADQ8N9N8 165 aaKnown RBP16.01■□□□□ 0.15
GABPB1-202ENST00000359031 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.01■□□□□ 0.158e-6■■■■□ 19.7
GABPB1-202ENST00000359031 DHX38Q92620 1227 aaKnown RBP16.01■□□□□ 0.15
GABPB1-202ENST00000359031 CCDC102AQ96A19 550 aa16.01■□□□□ 0.15
GABPB1-202ENST00000359031 PCDHB18PQ96TA0 734 aa16.01■□□□□ 0.15
GABPB1-202ENST00000359031 CGRRF1Q99675 332 aa16.01■□□□□ 0.15
GABPB1-202ENST00000359031 GPR20Q99678 358 aa16.01■□□□□ 0.15
GABPB1-202ENST00000359031 MSTO1Q9BUK6 570 aa16.01■□□□□ 0.15
GABPB1-202ENST00000359031 RBAKQ9NYW8 714 aaPredicted RBP16.01■□□□□ 0.15
GABPB1-202ENST00000359031 CTTNBP2NLQ9P2B4 639 aa16.01■□□□□ 0.15
GABPB1-202ENST00000359031 COG5Q9UP83 839 aa16.01■□□□□ 0.15
GABPB1-202ENST00000359031 ZSWIM8A7E2V4 1837 aa16.01■□□□□ 0.15
GABPB1-202ENST00000359031 PLXNB2O15031 1838 aa16.01■□□□□ 0.15
GABPB1-202ENST00000359031 ARIH2O95376 493 aa16.01■□□□□ 0.15
GABPB1-202ENST00000359031 C4BPAP04003 597 aaKnown RBP16.01■□□□□ 0.15
GABPB1-202ENST00000359031 MMEP08473 750 aa16.01■□□□□ 0.15
GABPB1-202ENST00000359031 PIK3CAP42336 1068 aa16.01■□□□□ 0.15
GABPB1-202ENST00000359031 ZNF157P51786 506 aaPredicted RBP16.01■□□□□ 0.15
GABPB1-202ENST00000359031 LY6KQ17RY6 165 aa16.01■□□□□ 0.15
GABPB1-202ENST00000359031 WDR44Q5JSH3 913 aa16.01■□□□□ 0.15
GABPB1-202ENST00000359031 CDCA2Q69YH5 1023 aaPredicted RBP16.01■□□□□ 0.15
GABPB1-202ENST00000359031 GPAT2Q6NUI2 795 aa16.01■□□□□ 0.15
GABPB1-202ENST00000359031 CRELD2Q6UXH1 353 aaPredicted RBP16.01■□□□□ 0.15
GABPB1-202ENST00000359031 SND1Q7KZF4 910 aaKnown RBP eCLIP16.01■□□□□ 0.15
GABPB1-202ENST00000359031 ZNF677Q86XU0 584 aa16.01■□□□□ 0.15
GABPB1-202ENST00000359031 ATP8B4Q8TF62 1192 aa16.01■□□□□ 0.15
GABPB1-202ENST00000359031 ZNF516Q92618 1163 aa16.01■□□□□ 0.15
GABPB1-202ENST00000359031 ADGRA2Q96PE1 1338 aa16.01■□□□□ 0.15
GABPB1-202ENST00000359031 NAP1L3Q99457 506 aaPredicted RBP16.01■□□□□ 0.15
GABPB1-202ENST00000359031 JPH2Q9BR39 696 aaPredicted RBP16.01■□□□□ 0.15
GABPB1-202ENST00000359031 TARS2Q9BW92 718 aaKnown RBP16.01■□□□□ 0.15
GABPB1-202ENST00000359031 SLITRK6Q9H5Y7 841 aa16.01■□□□□ 0.15
GABPB1-202ENST00000359031 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.01■□□□□ 0.154e-7■■■■■ 57.7
GABPB1-202ENST00000359031 SAGE1Q9NXZ1 904 aa16.01■□□□□ 0.15
GABPB1-202ENST00000359031 GTF3C4Q9UKN8 822 aa16.01■□□□□ 0.15
GABPB1-202ENST00000359031 PLXNA1Q9UIW2 1896 aa16■□□□□ 0.15
GABPB1-202ENST00000359031 NOP56O00567 594 aaKnown RBP16■□□□□ 0.15
GABPB1-202ENST00000359031 RAD51CO43502 376 aa16■□□□□ 0.15
GABPB1-202ENST00000359031 TRPA1O75762 1119 aa16■□□□□ 0.15
GABPB1-202ENST00000359031 HLA-DRAP01903 254 aa16■□□□□ 0.15
GABPB1-202ENST00000359031 CYP1A2P05177 515 aa16■□□□□ 0.15
GABPB1-202ENST00000359031 PGK2P07205 417 aa16■□□□□ 0.15
GABPB1-202ENST00000359031 GLI1P08151 1106 aa16■□□□□ 0.15
GABPB1-202ENST00000359031 TNNI1P19237 187 aa16■□□□□ 0.15
GABPB1-202ENST00000359031 SLC26A2P50443 739 aa16■□□□□ 0.15
GABPB1-202ENST00000359031 RNASE9P60153 205 aaKnown RBP16■□□□□ 0.15
GABPB1-202ENST00000359031 GUCY2DQ02846 1103 aa16■□□□□ 0.15
GABPB1-202ENST00000359031 PPP2R5EQ16537 467 aa16■□□□□ 0.15
GABPB1-202ENST00000359031 PTPROQ16827 1216 aa16■□□□□ 0.15
GABPB1-202ENST00000359031 TDRD10Q5VZ19 366 aaKnown RBP16■□□□□ 0.15
GABPB1-202ENST00000359031 EEPD1Q7L9B9 569 aa16■□□□□ 0.15
GABPB1-202ENST00000359031 DDX1Q92499 740 aaKnown RBP16■□□□□ 0.15
GABPB1-202ENST00000359031 TATDN2Q93075 761 aa16■□□□□ 0.15
GABPB1-202ENST00000359031 RPS6KC1Q96S38 1066 aa16■□□□□ 0.15
GABPB1-202ENST00000359031 HAPLN2Q9GZV7 340 aa16■□□□□ 0.15
GABPB1-202ENST00000359031 ANKFY1Q9P2R3 1169 aa16■□□□□ 0.15
GABPB1-202ENST00000359031 UVRAGQ9P2Y5 699 aa16■□□□□ 0.15
GABPB1-202ENST00000359031 PNMA3Q9UL41 463 aa16■□□□□ 0.15
GABPB1-202ENST00000359031 MCM3APO60318 1980 aa16■□□□□ 0.15
GABPB1-202ENST00000359031 TULP1O00294 542 aaPredicted RBP15.99■□□□□ 0.15
GABPB1-202ENST00000359031 KRIT1O00522 736 aa15.99■□□□□ 0.15
GABPB1-202ENST00000359031 KRT5P13647 590 aa15.99■□□□□ 0.15
GABPB1-202ENST00000359031 ACOT2P49753 483 aa15.99■□□□□ 0.15
GABPB1-202ENST00000359031 AP3M2P53677 418 aa15.99■□□□□ 0.15
GABPB1-202ENST00000359031 BPIFB4P59827 614 aa15.99■□□□□ 0.15
GABPB1-202ENST00000359031 MRPS25P82663 173 aaKnown RBP15.99■□□□□ 0.15
GABPB1-202ENST00000359031 SNAPC2Q13487 334 aa15.99■□□□□ 0.15
GABPB1-202ENST00000359031 MXD4Q14582 209 aaPredicted RBP15.99■□□□□ 0.15
GABPB1-202ENST00000359031 ZNF771Q7L3S4 317 aaPredicted RBP15.99■□□□□ 0.15
GABPB1-202ENST00000359031 ZBTB8OSQ8IWT0 167 aa15.99■□□□□ 0.15
GABPB1-202ENST00000359031 KLHL7Q8IXQ5 586 aa15.99■□□□□ 0.15
GABPB1-202ENST00000359031 UBL4BQ8N7F7 174 aa15.99■□□□□ 0.15
GABPB1-202ENST00000359031 GLG1Q92896 1179 aa15.99■□□□□ 0.15
GABPB1-202ENST00000359031 MRPL4Q9BYD3 311 aaKnown RBP15.99■□□□□ 0.15
GABPB1-202ENST00000359031 CCDC113Q9H0I3 377 aa15.99■□□□□ 0.15
GABPB1-202ENST00000359031 C2orf40Q9H1Z8 148 aa15.99■□□□□ 0.15
GABPB1-202ENST00000359031 EPB41L5Q9HCM4 733 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms