RNA–Protein interactions for RNA: ENST00000358389.7

CNOT3-202, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 4,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-202ENST00000358389 AKAP3O75969 853 aa12.16□□□□□ -0.46
CNOT3-202ENST00000358389 HARSP12081 509 aaKnown RBP12.16□□□□□ -0.46
CNOT3-202ENST00000358389 PLS3P13797 630 aa12.16□□□□□ -0.46
CNOT3-202ENST00000358389 WDR4P57081 412 aaKnown RBP12.16□□□□□ -0.46
CNOT3-202ENST00000358389 FAM182BQ5T319 152 aa12.16□□□□□ -0.46
CNOT3-202ENST00000358389 NCAPG2Q86XI2 1143 aa12.16□□□□□ -0.46
CNOT3-202ENST00000358389 SLC13A5Q86YT5 568 aaPredicted RBP12.16□□□□□ -0.46
CNOT3-202ENST00000358389 TAB3Q8N5C8 712 aaPredicted RBP12.16□□□□□ -0.46
CNOT3-202ENST00000358389 ENDOVQ8N8Q3 282 aaKnown RBP12.16□□□□□ -0.46
CNOT3-202ENST00000358389 OLFM3Q96PB7 478 aa12.16□□□□□ -0.46
CNOT3-202ENST00000358389 PLEKHG4BQ96PX9 1271 aa12.16□□□□□ -0.46
CNOT3-202ENST00000358389 KLF6Q99612 283 aaPredicted RBP12.16□□□□□ -0.46
CNOT3-202ENST00000358389 TYW1Q9NV66 732 aaKnown RBP12.16□□□□□ -0.46
CNOT3-202ENST00000358389 ZWINTO95229 277 aa12.16□□□□□ -0.46
CNOT3-202ENST00000358389 NR3C1P04150 777 aa12.16□□□□□ -0.46
CNOT3-202ENST00000358389 TRIM49P0CI25 452 aa12.16□□□□□ -0.46
CNOT3-202ENST00000358389 TRIM49CP0CI26 452 aa12.16□□□□□ -0.46
CNOT3-202ENST00000358389 VCAM1P19320 739 aa12.16□□□□□ -0.46
CNOT3-202ENST00000358389 CCDC15Q0P6D6 951 aa12.16□□□□□ -0.46
CNOT3-202ENST00000358389 ECM1Q16610 540 aa12.16□□□□□ -0.46
CNOT3-202ENST00000358389 ART4Q93070 314 aa12.16□□□□□ -0.46
CNOT3-202ENST00000358389 TMEM47Q9BQJ4 181 aa12.16□□□□□ -0.46
CNOT3-202ENST00000358389 ZSWIM1Q9BR11 485 aa12.16□□□□□ -0.46
CNOT3-202ENST00000358389 SPATA16Q9BXB7 569 aa12.16□□□□□ -0.46
CNOT3-202ENST00000358389 SPEF2Q9C093 1822 aa12.16□□□□□ -0.46
CNOT3-202ENST00000358389 SUPT3HO75486 399 aa12.15□□□□□ -0.46
CNOT3-202ENST00000358389 ABCD1P33897 745 aa12.15□□□□□ -0.46
CNOT3-202ENST00000358389 ARFIP2P53365 341 aa12.15□□□□□ -0.46
CNOT3-202ENST00000358389 CYP4A11Q02928 519 aa12.15□□□□□ -0.46
CNOT3-202ENST00000358389 LIN52Q52LA3 116 aa12.15□□□□□ -0.46
CNOT3-202ENST00000358389 COBLL1Q53SF7 1204 aa12.15□□□□□ -0.46
CNOT3-202ENST00000358389 C1orf146Q5VVC0 180 aa12.15□□□□□ -0.46
CNOT3-202ENST00000358389 LVRNQ6Q4G3 990 aa12.15□□□□□ -0.46
CNOT3-202ENST00000358389 PALB2Q86YC2 1186 aa12.15□□□□□ -0.46
CNOT3-202ENST00000358389 RHOT2Q8IXI1 618 aa12.15□□□□□ -0.46
CNOT3-202ENST00000358389 FAM186BQ8IYM0 893 aa12.15□□□□□ -0.46
CNOT3-202ENST00000358389 LRRC47Q8N1G4 583 aaKnown RBP12.15□□□□□ -0.46
CNOT3-202ENST00000358389 NRG4Q8WWG1 115 aa12.15□□□□□ -0.46
CNOT3-202ENST00000358389 SNF8Q96H20 258 aa12.15□□□□□ -0.46
CNOT3-202ENST00000358389 CLMNQ96JQ2 1002 aa12.15□□□□□ -0.46
CNOT3-202ENST00000358389 BTBD10Q9BSF8 475 aa12.15□□□□□ -0.46
CNOT3-202ENST00000358389 ASCC2Q9H1I8 757 aaPredicted RBP12.15□□□□□ -0.46
CNOT3-202ENST00000358389 METTL14Q9HCE5 456 aaKnown RBP12.15□□□□□ -0.46
CNOT3-202ENST00000358389 NINJ2Q9NZG7 142 aa12.15□□□□□ -0.46
CNOT3-202ENST00000358389 STARD13Q9Y3M8 1113 aa12.15□□□□□ -0.46
CNOT3-202ENST00000358389 STAT3P40763 770 aa12.15□□□□□ -0.46
CNOT3-202ENST00000358389 CASP5P51878 434 aa12.15□□□□□ -0.46
CNOT3-202ENST00000358389 DSG1Q02413 1049 aa12.15□□□□□ -0.46
CNOT3-202ENST00000358389 KNOP1Q1ED39 458 aaKnown RBP12.15□□□□□ -0.46
CNOT3-202ENST00000358389 CYFIP1Q7L576 1253 aa12.15□□□□□ -0.46
CNOT3-202ENST00000358389 DNAJC19Q96DA6 116 aa12.15□□□□□ -0.46
CNOT3-202ENST00000358389 NSL1Q96IY1 281 aa12.15□□□□□ -0.46
CNOT3-202ENST00000358389 MKNK1Q9BUB5 465 aa12.15□□□□□ -0.46
CNOT3-202ENST00000358389 TIPINQ9BVW5 301 aa12.15□□□□□ -0.46
CNOT3-202ENST00000358389 MIS12Q9H081 205 aa12.15□□□□□ -0.46
CNOT3-202ENST00000358389 EHMT1Q9H9B1 1298 aa12.15□□□□□ -0.46
CNOT3-202ENST00000358389 LNPEPQ9UIQ6 1025 aa12.15□□□□□ -0.46
CNOT3-202ENST00000358389 TTC7AQ9ULT0 858 aaPredicted RBP12.15□□□□□ -0.46
CNOT3-202ENST00000358389 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.15□□□□□ -0.46
CNOT3-202ENST00000358389 POTEFA5A3E0 1075 aa12.15□□□□□ -0.46
CNOT3-202ENST00000358389 ZSCAN9O15535 394 aaPredicted RBP12.15□□□□□ -0.46
CNOT3-202ENST00000358389 POTEIP0CG38 1075 aa12.15□□□□□ -0.46
CNOT3-202ENST00000358389 KDSRQ06136 332 aa12.15□□□□□ -0.46
CNOT3-202ENST00000358389 Q4G0T1 1027 aa12.15□□□□□ -0.46
CNOT3-202ENST00000358389 POTEGQ6S5H5 508 aa12.15□□□□□ -0.46
CNOT3-202ENST00000358389 POTEEQ6S8J3 1075 aa12.15□□□□□ -0.46
CNOT3-202ENST00000358389 FRMD5Q7Z6J6 570 aa12.15□□□□□ -0.46
CNOT3-202ENST00000358389 DGKHQ86XP1 1220 aa12.15□□□□□ -0.46
CNOT3-202ENST00000358389 TRIM55Q9BYV6 548 aa12.15□□□□□ -0.46
CNOT3-202ENST00000358389 ARL8BQ9NVJ2 186 aa12.15□□□□□ -0.46
CNOT3-202ENST00000358389 ARMCX1Q9P291 453 aa12.15□□□□□ -0.46
CNOT3-202ENST00000358389 B2RBV5 119 aa12.14□□□□□ -0.47
CNOT3-202ENST00000358389 H3BRJ5 948 aa12.14□□□□□ -0.47
CNOT3-202ENST00000358389 USP1O94782 785 aa12.14□□□□□ -0.47
CNOT3-202ENST00000358389 T-ENOLP0DO92 83 aa12.14□□□□□ -0.47
CNOT3-202ENST00000358389 PRKCIP41743 596 aa12.14□□□□□ -0.47
CNOT3-202ENST00000358389 ACVR2BQ13705 512 aa12.14□□□□□ -0.47
CNOT3-202ENST00000358389 WDR60Q8WVS4 1066 aa12.14□□□□□ -0.47
CNOT3-202ENST00000358389 MAML1Q92585 1016 aa12.14□□□□□ -0.47
CNOT3-202ENST00000358389 EYA3Q99504 573 aa12.14□□□□□ -0.47
CNOT3-202ENST00000358389 PHACTR1Q9C0D0 580 aa12.14□□□□□ -0.47
CNOT3-202ENST00000358389 DHX36Q9H2U1 1008 aaKnown RBP12.14□□□□□ -0.47
CNOT3-202ENST00000358389 COG5Q9UP83 839 aa12.14□□□□□ -0.47
CNOT3-202ENST00000358389 USP54Q70EL1 1684 aa12.14□□□□□ -0.47
CNOT3-202ENST00000358389 ZNF189O75820 626 aaPredicted RBP12.14□□□□□ -0.47
CNOT3-202ENST00000358389 TMCC1O94876 653 aa12.14□□□□□ -0.47
CNOT3-202ENST00000358389 ENO1P06733 434 aaKnown RBP12.14□□□□□ -0.47
CNOT3-202ENST00000358389 YY1P25490 414 aa12.14□□□□□ -0.47
CNOT3-202ENST00000358389 RPA3P35244 121 aaPredicted RBP12.14□□□□□ -0.47
CNOT3-202ENST00000358389 OCRLQ01968 901 aa12.14□□□□□ -0.47
CNOT3-202ENST00000358389 MECOMQ03112 1051 aa12.14□□□□□ -0.47
CNOT3-202ENST00000358389 AP1B1Q10567 949 aa12.14□□□□□ -0.47
CNOT3-202ENST00000358389 MTM1Q13496 603 aa12.14□□□□□ -0.47
CNOT3-202ENST00000358389 CPNE8Q86YQ8 564 aa12.14□□□□□ -0.47
CNOT3-202ENST00000358389 CPXCR1Q8N123 301 aa12.14□□□□□ -0.47
CNOT3-202ENST00000358389 SH3TC2Q8TF17 1288 aa12.14□□□□□ -0.47
CNOT3-202ENST00000358389 THTPAQ9BU02 230 aa12.14□□□□□ -0.47
CNOT3-202ENST00000358389 PCYOX1Q9UHG3 505 aa12.14□□□□□ -0.47
CNOT3-202ENST00000358389 MYH2Q9UKX2 1941 aa12.14□□□□□ -0.47
CNOT3-202ENST00000358389 PIAS1O75925 651 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms