RNA–Protein interactions for RNA: ENST00000357943.9

CCNE1-202, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-202ENST00000357943 NFE2L3Q9Y4A8 694 aa16.16■□□□□ 0.18
CCNE1-202ENST00000357943 LACTBL1A8MY62 500 aa16.16■□□□□ 0.18
CCNE1-202ENST00000357943 GJB5O95377 273 aa16.16■□□□□ 0.18
CCNE1-202ENST00000357943 ATP2A2P16615 1042 aaKnown RBP16.16■□□□□ 0.18
CCNE1-202ENST00000357943 PSMC2P35998 433 aaKnown RBP16.16■□□□□ 0.18
CCNE1-202ENST00000357943 MYL5Q02045 173 aa16.16■□□□□ 0.18
CCNE1-202ENST00000357943 SPAG1Q07617 926 aa16.16■□□□□ 0.18
CCNE1-202ENST00000357943 CYP24A1Q07973 514 aa16.16■□□□□ 0.18
CCNE1-202ENST00000357943 HSP90AA4PQ58FG1 418 aa16.16■□□□□ 0.18
CCNE1-202ENST00000357943 GLRA4Q5JXX5 417 aa16.16■□□□□ 0.18
CCNE1-202ENST00000357943 GLB1LQ6UWU2 654 aa16.16■□□□□ 0.18
CCNE1-202ENST00000357943 FILIP1Q7Z7B0 1213 aa16.16■□□□□ 0.18
CCNE1-202ENST00000357943 DHX40Q8IX18 779 aaKnown RBP16.16■□□□□ 0.18
CCNE1-202ENST00000357943 FAM186BQ8IYM0 893 aa16.16■□□□□ 0.18
CCNE1-202ENST00000357943 PLEKHO2Q8TD55 490 aa16.16■□□□□ 0.18
CCNE1-202ENST00000357943 MFSD14AQ96MC6 490 aa16.16■□□□□ 0.18
CCNE1-202ENST00000357943 CEP63Q96MT8 703 aa16.16■□□□□ 0.18
CCNE1-202ENST00000357943 ZMAT2Q96NC0 199 aaKnown RBP16.16■□□□□ 0.18
CCNE1-202ENST00000357943 CASD1Q96PB1 797 aa16.16■□□□□ 0.18
CCNE1-202ENST00000357943 SLC9A7Q96T83 725 aa16.16■□□□□ 0.18
CCNE1-202ENST00000357943 TSPY26PQ9H489 355 aa16.16■□□□□ 0.18
CCNE1-202ENST00000357943 PDE11AQ9HCR9 933 aa16.16■□□□□ 0.18
CCNE1-202ENST00000357943 SAMSN1Q9NSI8 373 aaKnown RBP16.16■□□□□ 0.18
CCNE1-202ENST00000357943 RNF216Q9NWF9 866 aaPredicted RBP16.16■□□□□ 0.18
CCNE1-202ENST00000357943 CNTN3Q9P232 1028 aa16.16■□□□□ 0.18
CCNE1-202ENST00000357943 PLAGL2Q9UPG8 496 aa16.16■□□□□ 0.18
CCNE1-202ENST00000357943 PTGESO14684 152 aa16.15■□□□□ 0.18
CCNE1-202ENST00000357943 SCNN1GP51170 649 aa16.15■□□□□ 0.18
CCNE1-202ENST00000357943 POU5F1Q01860 360 aaKnown RBP16.15■□□□□ 0.18
CCNE1-202ENST00000357943 PPP2R3AQ06190 1150 aa16.15■□□□□ 0.18
CCNE1-202ENST00000357943 IQCB1Q15051 598 aa16.15■□□□□ 0.18
CCNE1-202ENST00000357943 XKR4Q5GH76 650 aa16.15■□□□□ 0.18
CCNE1-202ENST00000357943 FAM109BQ6ICB4 259 aaPredicted RBP16.15■□□□□ 0.18
CCNE1-202ENST00000357943 IRF2BP1Q8IU81 584 aa16.15■□□□□ 0.18
CCNE1-202ENST00000357943 HERC6Q8IVU3 1022 aa16.15■□□□□ 0.18
CCNE1-202ENST00000357943 ABI1Q8IZP0 508 aa16.15■□□□□ 0.18
CCNE1-202ENST00000357943 PHOSPHO2Q8TCD6 241 aa16.15■□□□□ 0.18
CCNE1-202ENST00000357943 ZNF689Q96CS4 500 aaPredicted RBP16.15■□□□□ 0.18
CCNE1-202ENST00000357943 BORCS6Q96GS4 357 aa16.15■□□□□ 0.18
CCNE1-202ENST00000357943 MKNK1Q9BUB5 465 aa16.15■□□□□ 0.18
CCNE1-202ENST00000357943 PRO3102Q9H379 93 aa16.15■□□□□ 0.18
CCNE1-202ENST00000357943 PLEKHA5Q9HAU0 1116 aa16.15■□□□□ 0.18
CCNE1-202ENST00000357943 RC3H2Q9HBD1 1191 aaKnown RBP16.15■□□□□ 0.18
CCNE1-202ENST00000357943 CBX8Q9HC52 389 aa16.15■□□□□ 0.18
CCNE1-202ENST00000357943 PTPRSQ13332 1948 aa16.14■□□□□ 0.17
CCNE1-202ENST00000357943 SMIM28A0A1B0GU29 152 aa16.14■□□□□ 0.17
CCNE1-202ENST00000357943 GRXCR1A8MXD5 290 aa16.14■□□□□ 0.17
CCNE1-202ENST00000357943 MAPK13O15264 365 aa16.14■□□□□ 0.17
CCNE1-202ENST00000357943 SLC16A3O15427 465 aaKnown RBP16.14■□□□□ 0.17
CCNE1-202ENST00000357943 HOXA2O43364 376 aa16.14■□□□□ 0.17
CCNE1-202ENST00000357943 POMCP01189 267 aa16.14■□□□□ 0.17
CCNE1-202ENST00000357943 EPB41P11171 864 aaKnown RBP16.14■□□□□ 0.17
CCNE1-202ENST00000357943 PAN2Q504Q3 1202 aaKnown RBP16.14■□□□□ 0.17
CCNE1-202ENST00000357943 LUZP1Q86V48 1076 aa16.14■□□□□ 0.17
CCNE1-202ENST00000357943 TDHQ8IZJ6 230 aa16.14■□□□□ 0.17
CCNE1-202ENST00000357943 CCDC127Q96BQ5 260 aa16.14■□□□□ 0.17
CCNE1-202ENST00000357943 FAM84AQ96KN4 292 aa16.14■□□□□ 0.17
CCNE1-202ENST00000357943 RPS6KC1Q96S38 1066 aa16.14■□□□□ 0.17
CCNE1-202ENST00000357943 POP1Q99575 1024 aaKnown RBP16.14■□□□□ 0.17
CCNE1-202ENST00000357943 TMEM117Q9H0C3 514 aa16.14■□□□□ 0.17
CCNE1-202ENST00000357943 FANCLQ9NW38 375 aa16.14■□□□□ 0.17
CCNE1-202ENST00000357943 TBKBP1A7MCY6 615 aa16.13■□□□□ 0.17
CCNE1-202ENST00000357943 IKBKBO14920 756 aa16.13■□□□□ 0.17
CCNE1-202ENST00000357943 INPPL1O15357 1258 aa16.13■□□□□ 0.17
CCNE1-202ENST00000357943 FGFR1OPO95684 399 aaKnown RBP16.13■□□□□ 0.17
CCNE1-202ENST00000357943 CAVIN2O95810 425 aa16.13■□□□□ 0.17
CCNE1-202ENST00000357943 DLATP10515 647 aaKnown RBP16.13■□□□□ 0.17
CCNE1-202ENST00000357943 DLG4P78352 724 aa16.13■□□□□ 0.17
CCNE1-202ENST00000357943 PSMD6Q15008 389 aa16.13■□□□□ 0.17
CCNE1-202ENST00000357943 NOMO2Q5JPE7 1267 aa16.13■□□□□ 0.17
CCNE1-202ENST00000357943 LMBRD2Q68DH5 695 aaPredicted RBP16.13■□□□□ 0.17
CCNE1-202ENST00000357943 JADE1Q6IE81 842 aa16.13■□□□□ 0.17
CCNE1-202ENST00000357943 INTS8Q75QN2 995 aaKnown RBP16.13■□□□□ 0.17
CCNE1-202ENST00000357943 EFCAB13Q8IY85 973 aa16.13■□□□□ 0.17
CCNE1-202ENST00000357943 TMEM130Q8N3G9 435 aa16.13■□□□□ 0.17
CCNE1-202ENST00000357943 FAM200AQ8TCP9 573 aa16.13■□□□□ 0.17
CCNE1-202ENST00000357943 PARD3BQ8TEW8 1205 aa16.13■□□□□ 0.17
CCNE1-202ENST00000357943 CNOT6LQ96LI5 555 aaKnown RBP16.13■□□□□ 0.17
CCNE1-202ENST00000357943 YME1L1Q96TA2 773 aa16.13■□□□□ 0.17
CCNE1-202ENST00000357943 ZBED2Q9BTP6 218 aa16.13■□□□□ 0.17
CCNE1-202ENST00000357943 HSD3B7Q9H2F3 369 aa16.13■□□□□ 0.17
CCNE1-202ENST00000357943 THAP9Q9H5L6 903 aa16.13■□□□□ 0.17
CCNE1-202ENST00000357943 ASB7Q9H672 318 aa16.13■□□□□ 0.17
CCNE1-202ENST00000357943 HCSTQ9UBK5 93 aa16.13■□□□□ 0.17
CCNE1-202ENST00000357943 PTPRJQ12913 1337 aa16.13■□□□□ 0.17
CCNE1-202ENST00000357943 COL4A6Q14031 1691 aa16.13■□□□□ 0.17
CCNE1-202ENST00000357943 LRRIQ3A6PVS8 624 aaPredicted RBP16.12■□□□□ 0.17
CCNE1-202ENST00000357943 IL18RAPO95256 599 aa16.12■□□□□ 0.17
CCNE1-202ENST00000357943 NFICP08651 508 aa16.12■□□□□ 0.17
CCNE1-202ENST00000357943 KCNE1P15382 129 aa16.12■□□□□ 0.17
CCNE1-202ENST00000357943 RABGGTBP53611 331 aa16.12■□□□□ 0.17
CCNE1-202ENST00000357943 HTRA4P83105 476 aaPredicted RBP16.12■□□□□ 0.17
CCNE1-202ENST00000357943 BFSP1Q12934 665 aa16.12■□□□□ 0.17
CCNE1-202ENST00000357943 HSP90AA2PQ14568 343 aaPredicted RBP16.12■□□□□ 0.17
CCNE1-202ENST00000357943 GSE1Q14687 1217 aa16.12■□□□□ 0.17
CCNE1-202ENST00000357943 CCDC40Q4G0X9 1142 aa16.12■□□□□ 0.17
CCNE1-202ENST00000357943 FRMD5Q7Z6J6 570 aa16.12■□□□□ 0.17
CCNE1-202ENST00000357943 CREBRFQ8IUR6 639 aa16.12■□□□□ 0.17
CCNE1-202ENST00000357943 KIF12Q96FN5 646 aa16.12■□□□□ 0.17
CCNE1-202ENST00000357943 FNBP1Q96RU3 617 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms