RNA–Protein interactions for RNA: ENST00000355155.5

VPS13B-201, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-201ENST00000355155 LRRN2O75325 713 aa18.56■□□□□ 0.56
VPS13B-201ENST00000355155 HLA-DRAP01903 254 aa18.56■□□□□ 0.56
VPS13B-201ENST00000355155 ATP1A1P05023 1023 aaKnown RBP18.56■□□□□ 0.56
VPS13B-201ENST00000355155 CTGFP29279 349 aa18.56■□□□□ 0.56
VPS13B-201ENST00000355155 ACOT2P49753 483 aa18.56■□□□□ 0.56
VPS13B-201ENST00000355155 KIAA0319LQ8IZA0 1049 aa18.56■□□□□ 0.56
VPS13B-201ENST00000355155 DDX1Q92499 740 aaKnown RBP18.56■□□□□ 0.56
VPS13B-201ENST00000355155 PDE11AQ9HCR9 933 aa18.56■□□□□ 0.56
VPS13B-201ENST00000355155 SAR1BQ9Y6B6 198 aa18.56■□□□□ 0.56
VPS13B-201ENST00000355155 MTA2O94776 668 aa18.56■□□□□ 0.56
VPS13B-201ENST00000355155 H2AFZP0C0S5 128 aa18.56■□□□□ 0.56
VPS13B-201ENST00000355155 CHRNB2P17787 502 aa18.56■□□□□ 0.56
VPS13B-201ENST00000355155 KIAA0753Q2KHM9 967 aa18.56■□□□□ 0.56
VPS13B-201ENST00000355155 H2AFVQ71UI9 128 aa18.56■□□□□ 0.56
VPS13B-201ENST00000355155 TLK2Q86UE8 772 aa18.56■□□□□ 0.56
VPS13B-201ENST00000355155 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.56■□□□□ 0.56
VPS13B-201ENST00000355155 MINDY3Q9H8M7 445 aa18.56■□□□□ 0.56
VPS13B-201ENST00000355155 MOCS3O95396 460 aa18.55■□□□□ 0.56
VPS13B-201ENST00000355155 IQCF3P0C7M6 154 aa18.55■□□□□ 0.56
VPS13B-201ENST00000355155 ACO1P21399 889 aaKnown RBP18.55■□□□□ 0.56
VPS13B-201ENST00000355155 TBXAS1P24557 533 aaPredicted RBP18.55■□□□□ 0.56
VPS13B-201ENST00000355155 ARID5AQ03989 594 aa18.55■□□□□ 0.56
VPS13B-201ENST00000355155 LRRC57Q8N9N7 239 aa18.55■□□□□ 0.56
VPS13B-201ENST00000355155 LRRN4CLQ8ND94 238 aa18.55■□□□□ 0.56
VPS13B-201ENST00000355155 CDT1Q9H211 546 aa18.55■□□□□ 0.56
VPS13B-201ENST00000355155 FAM124BQ9H5Z6 455 aaPredicted RBP18.55■□□□□ 0.56
VPS13B-201ENST00000355155 RABGGTAQ92696 567 aa18.55■□□□□ 0.56
VPS13B-201ENST00000355155 PACSIN1Q9BY11 444 aa18.55■□□□□ 0.56
VPS13B-201ENST00000355155 RNF14Q9UBS8 474 aa18.55■□□□□ 0.56
VPS13B-201ENST00000355155 PDCD11Q14690 1871 aaKnown RBP18.55■□□□□ 0.56
VPS13B-201ENST00000355155 PNMA6AP0CW24 399 aaPredicted RBP18.55■□□□□ 0.56
VPS13B-201ENST00000355155 TCP1P17987 556 aaKnown RBP18.55■□□□□ 0.56
VPS13B-201ENST00000355155 MEI1Q5TIA1 1274 aa18.55■□□□□ 0.56
VPS13B-201ENST00000355155 MTERF4Q7Z6M4 381 aaKnown RBP18.55■□□□□ 0.56
VPS13B-201ENST00000355155 TAF4BQ92750 862 aa18.55■□□□□ 0.56
VPS13B-201ENST00000355155 KAT5Q92993 513 aa18.55■□□□□ 0.56
VPS13B-201ENST00000355155 KATNAL1Q9BW62 490 aa18.55■□□□□ 0.56
VPS13B-201ENST00000355155 PDZD7Q9H5P4 517 aa18.55■□□□□ 0.56
VPS13B-201ENST00000355155 ANKFY1Q9P2R3 1169 aa18.55■□□□□ 0.56
VPS13B-201ENST00000355155 MACROD2A1Z1Q3 448 aa18.54■□□□□ 0.56
VPS13B-201ENST00000355155 ANKRD62A6NC57 917 aa18.54■□□□□ 0.56
VPS13B-201ENST00000355155 DLATP10515 647 aaKnown RBP18.54■□□□□ 0.56
VPS13B-201ENST00000355155 CYBAP13498 195 aa18.54■□□□□ 0.56
VPS13B-201ENST00000355155 TNFAIP3P21580 790 aa18.54■□□□□ 0.56
VPS13B-201ENST00000355155 ARHGAP44Q17R89 818 aa18.54■□□□□ 0.56
VPS13B-201ENST00000355155 NT5DC4Q86YG4 428 aa18.54■□□□□ 0.56
VPS13B-201ENST00000355155 MNS1Q8NEH6 495 aa18.54■□□□□ 0.56
VPS13B-201ENST00000355155 ABCB6Q9NP58 842 aa18.54■□□□□ 0.56
VPS13B-201ENST00000355155 C1orf112Q9NSG2 853 aa18.54■□□□□ 0.56
VPS13B-201ENST00000355155 DUSP11O75319 330 aaKnown RBP18.54■□□□□ 0.56
VPS13B-201ENST00000355155 GPR32O75388 356 aa18.54■□□□□ 0.56
VPS13B-201ENST00000355155 ASS1P00966 412 aaKnown RBP18.54■□□□□ 0.56
VPS13B-201ENST00000355155 SMIM10L2AP0DMW4 78 aa18.54■□□□□ 0.56
VPS13B-201ENST00000355155 SMIM10L2BP0DMW5 78 aa18.54■□□□□ 0.56
VPS13B-201ENST00000355155 FCGRTP55899 365 aa18.54■□□□□ 0.56
VPS13B-201ENST00000355155 GJA9P57773 515 aa18.54■□□□□ 0.56
VPS13B-201ENST00000355155 CDR2Q01850 454 aa18.54■□□□□ 0.56
VPS13B-201ENST00000355155 CKAP4Q07065 602 aaKnown RBP18.54■□□□□ 0.56
VPS13B-201ENST00000355155 CCL14Q16627 93 aa18.54■□□□□ 0.56
VPS13B-201ENST00000355155 TATDN2Q93075 761 aa18.54■□□□□ 0.56
VPS13B-201ENST00000355155 NLRP4Q96MN2 994 aa18.54■□□□□ 0.56
VPS13B-201ENST00000355155 MAP7D2Q96T17 732 aa18.54■□□□□ 0.56
VPS13B-201ENST00000355155 VRTNQ9H8Y1 702 aa18.54■□□□□ 0.56
VPS13B-201ENST00000355155 STXBP5LQ9Y2K9 1186 aa18.54■□□□□ 0.56
VPS13B-201ENST00000355155 A0A087WZ62 844 aa18.53■□□□□ 0.56
VPS13B-201ENST00000355155 CLTAP09496 248 aa18.53■□□□□ 0.56
VPS13B-201ENST00000355155 AKR1A1P14550 325 aa18.53■□□□□ 0.56
VPS13B-201ENST00000355155 PSEN2P49810 448 aa18.53■□□□□ 0.56
VPS13B-201ENST00000355155 ZNF132P52740 706 aa18.53■□□□□ 0.56
VPS13B-201ENST00000355155 BPIFB4P59827 614 aa18.53■□□□□ 0.56
VPS13B-201ENST00000355155 WDR44Q5JSH3 913 aa18.53■□□□□ 0.56
VPS13B-201ENST00000355155 METTL13Q8N6R0 699 aa18.53■□□□□ 0.56
VPS13B-201ENST00000355155 LMBR1Q8WVP7 490 aa18.53■□□□□ 0.56
VPS13B-201ENST00000355155 GOLGA1Q92805 767 aa18.53■□□□□ 0.56
VPS13B-201ENST00000355155 FDXACB1Q9BRP7 624 aaPredicted RBP18.53■□□□□ 0.56
VPS13B-201ENST00000355155 TLR10Q9BXR5 811 aa18.53■□□□□ 0.56
VPS13B-201ENST00000355155 ASB7Q9H672 318 aa18.53■□□□□ 0.56
VPS13B-201ENST00000355155 HYOU1Q9Y4L1 999 aa18.53■□□□□ 0.56
VPS13B-201ENST00000355155 SCN10AQ9Y5Y9 1956 aa18.53■□□□□ 0.56
VPS13B-201ENST00000355155 KAT6AQ92794 2004 aa18.53■□□□□ 0.56
VPS13B-201ENST00000355155 A0A1B0GUA9 196 aa18.53■□□□□ 0.56
VPS13B-201ENST00000355155 GRID2IPA4D2P6 1211 aa18.53■□□□□ 0.56
VPS13B-201ENST00000355155 TNPO2O14787 897 aaKnown RBP18.53■□□□□ 0.56
VPS13B-201ENST00000355155 DYNC1LI2O43237 492 aaPredicted RBP18.53■□□□□ 0.56
VPS13B-201ENST00000355155 RTN2O75298 545 aa18.53■□□□□ 0.56
VPS13B-201ENST00000355155 STAU1O95793 577 aaKnown RBP18.53■□□□□ 0.56
VPS13B-201ENST00000355155 H2AFXP16104 143 aaPredicted RBP18.53■□□□□ 0.56
VPS13B-201ENST00000355155 TNNI1P19237 187 aa18.53■□□□□ 0.56
VPS13B-201ENST00000355155 TNFSF9P41273 254 aa18.53■□□□□ 0.56
VPS13B-201ENST00000355155 GALCP54803 685 aa18.53■□□□□ 0.56
VPS13B-201ENST00000355155 MFSD10Q14728 455 aa18.53■□□□□ 0.56
VPS13B-201ENST00000355155 ENOX2Q16206 610 aaKnown RBP18.53■□□□□ 0.56
VPS13B-201ENST00000355155 EEF1DP3Q658K8 133 aa18.53■□□□□ 0.56
VPS13B-201ENST00000355155 NOP9Q86U38 636 aaKnown RBP18.53■□□□□ 0.56
VPS13B-201ENST00000355155 PPM1KQ8N3J5 372 aa18.53■□□□□ 0.56
VPS13B-201ENST00000355155 GPR161Q8N6U8 529 aaKnown RBP18.53■□□□□ 0.56
VPS13B-201ENST00000355155 RFFLQ8WZ73 363 aa18.53■□□□□ 0.56
VPS13B-201ENST00000355155 APOBEC3GQ9HC16 384 aaKnown RBP18.53■□□□□ 0.56
VPS13B-201ENST00000355155 TSPAN1O60635 241 aa18.52■□□□□ 0.56
VPS13B-201ENST00000355155 GJB1P08034 283 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms