RNA–Protein interactions for RNA: ENST00000353278.8

SLC6A20-201, Transcript of solute carrier family 6 member 20, humanhuman

TSL 1 (best) BASIC

Gene SLC6A20, Length 5,247 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A20-201ENST00000353278 EXOSC10Q01780 885 aaKnown RBP11.88□□□□□ -0.51
SLC6A20-201ENST00000353278 ADCY2Q08462 1091 aa11.88□□□□□ -0.51
SLC6A20-201ENST00000353278 SFSWAPQ12872 951 aaKnown RBP11.88□□□□□ -0.51
SLC6A20-201ENST00000353278 KLHL38Q2WGJ6 581 aa11.88□□□□□ -0.51
SLC6A20-201ENST00000353278 FMR1NBQ8N0W7 255 aaPredicted RBP11.88□□□□□ -0.51
SLC6A20-201ENST00000353278 REEP2Q9BRK0 252 aa11.88□□□□□ -0.51
SLC6A20-201ENST00000353278 VPS11Q9H270 941 aa11.88□□□□□ -0.51
SLC6A20-201ENST00000353278 FRMPD1Q5SYB0 1578 aa11.88□□□□□ -0.51
SLC6A20-201ENST00000353278 AP3B1O00203 1094 aa11.88□□□□□ -0.51
SLC6A20-201ENST00000353278 CXCL11O14625 94 aa11.88□□□□□ -0.51
SLC6A20-201ENST00000353278 MYO1DO94832 1006 aa11.88□□□□□ -0.51
SLC6A20-201ENST00000353278 PDGFRAP16234 1089 aa11.88□□□□□ -0.51
SLC6A20-201ENST00000353278 DDX5P17844 614 aaKnown RBP11.88□□□□□ -0.51
SLC6A20-201ENST00000353278 HARS2P49590 506 aaKnown RBP11.88□□□□□ -0.51
SLC6A20-201ENST00000353278 NR1H3Q13133 447 aa11.88□□□□□ -0.51
SLC6A20-201ENST00000353278 ARHGEF7Q14155 803 aa11.88□□□□□ -0.51
SLC6A20-201ENST00000353278 C6orf118Q5T5N4 469 aa11.88□□□□□ -0.51
SLC6A20-201ENST00000353278 FOPNLQ96NB1 174 aa11.88□□□□□ -0.51
SLC6A20-201ENST00000353278 MUC3BQ9H195 1237 aa11.88□□□□□ -0.51
SLC6A20-201ENST00000353278 WNT8AQ9H1J5 351 aa11.88□□□□□ -0.51
SLC6A20-201ENST00000353278 ABHD10Q9NUJ1 306 aa11.88□□□□□ -0.51
SLC6A20-201ENST00000353278 AFF4Q9UHB7 1163 aaKnown RBP11.88□□□□□ -0.51
SLC6A20-201ENST00000353278 ITM2BQ9Y287 266 aa11.88□□□□□ -0.51
SLC6A20-201ENST00000353278 ACTR2P61160 394 aa11.88□□□□□ -0.51
SLC6A20-201ENST00000353278 SNRPFP62306 86 aaKnown RBP11.88□□□□□ -0.51
SLC6A20-201ENST00000353278 KIF19Q2TAC6 998 aa11.88□□□□□ -0.51
SLC6A20-201ENST00000353278 TSSK1BQ9BXA7 367 aa11.88□□□□□ -0.51
SLC6A20-201ENST00000353278 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.88□□□□□ -0.51
SLC6A20-201ENST00000353278 PYCARDQ9ULZ3 195 aa11.88□□□□□ -0.51
SLC6A20-201ENST00000353278 RGL2O15211 777 aa11.87□□□□□ -0.51
SLC6A20-201ENST00000353278 RGS7P49802 495 aa11.87□□□□□ -0.51
SLC6A20-201ENST00000353278 POU5F1BQ06416 359 aa11.87□□□□□ -0.51
SLC6A20-201ENST00000353278 IL31Q6EBC2 164 aa11.87□□□□□ -0.51
SLC6A20-201ENST00000353278 STOX1Q6ZVD7 989 aa11.87□□□□□ -0.51
SLC6A20-201ENST00000353278 ARHGAP18Q8N392 663 aa11.87□□□□□ -0.51
SLC6A20-201ENST00000353278 ACER1Q8TDN7 264 aa11.87□□□□□ -0.51
SLC6A20-201ENST00000353278 VPS33BQ9H267 617 aa11.87□□□□□ -0.51
SLC6A20-201ENST00000353278 RIMBP3CA6NJZ7 1639 aa11.87□□□□□ -0.51
SLC6A20-201ENST00000353278 RIMBP3BA6NNM3 1639 aa11.87□□□□□ -0.51
SLC6A20-201ENST00000353278 RIMBP3Q9UFD9 1639 aa11.87□□□□□ -0.51
SLC6A20-201ENST00000353278 CYP26A1O43174 497 aa11.87□□□□□ -0.51
SLC6A20-201ENST00000353278 ODC1P11926 461 aa11.87□□□□□ -0.51
SLC6A20-201ENST00000353278 RAG1P15918 1043 aa11.87□□□□□ -0.51
SLC6A20-201ENST00000353278 NCF2P19878 526 aaPredicted RBP11.87□□□□□ -0.51
SLC6A20-201ENST00000353278 TAF11Q15544 211 aa11.87□□□□□ -0.51
SLC6A20-201ENST00000353278 NBPF12Q5TAG4 269 aaPredicted RBP11.87□□□□□ -0.51
SLC6A20-201ENST00000353278 FAM83AQ86UY5 434 aa11.87□□□□□ -0.51
SLC6A20-201ENST00000353278 WDR75Q8IWA0 830 aaKnown RBP11.87□□□□□ -0.51
SLC6A20-201ENST00000353278 UCMAQ8WVF2 138 aa11.87□□□□□ -0.51
SLC6A20-201ENST00000353278 C17orf75Q9HAS0 396 aa11.87□□□□□ -0.51
SLC6A20-201ENST00000353278 TUBE1Q9UJT0 475 aa11.87□□□□□ -0.51
SLC6A20-201ENST00000353278 SNX24Q9Y343 169 aa11.87□□□□□ -0.51
SLC6A20-201ENST00000353278 C2CD2LO14523 706 aa11.87□□□□□ -0.51
SLC6A20-201ENST00000353278 NKRFO15226 690 aaKnown RBP eCLIP11.87□□□□□ -0.51
SLC6A20-201ENST00000353278 LBRQ14739 615 aaKnown RBP11.87□□□□□ -0.51
SLC6A20-201ENST00000353278 CRLF3Q8IUI8 442 aa11.87□□□□□ -0.51
SLC6A20-201ENST00000353278 RFFLQ8WZ73 363 aa11.87□□□□□ -0.51
SLC6A20-201ENST00000353278 TSPYL2Q9H2G4 693 aaPredicted RBP11.87□□□□□ -0.51
SLC6A20-201ENST00000353278 ENTPD7Q9NQZ7 604 aa11.87□□□□□ -0.51
SLC6A20-201ENST00000353278 CEP152O94986 1710 aa11.87□□□□□ -0.51
SLC6A20-201ENST00000353278 QRICH2Q9H0J4 1663 aa11.87□□□□□ -0.51
SLC6A20-201ENST00000353278 URODP06132 367 aa11.87□□□□□ -0.51
SLC6A20-201ENST00000353278 IRF1P10914 325 aa11.87□□□□□ -0.51
SLC6A20-201ENST00000353278 RPA1P27694 616 aa11.87□□□□□ -0.51
SLC6A20-201ENST00000353278 ATICP31939 592 aa11.87□□□□□ -0.51
SLC6A20-201ENST00000353278 RFC1P35251 1148 aaPredicted RBP11.87□□□□□ -0.51
SLC6A20-201ENST00000353278 GPC2Q8N158 579 aa11.87□□□□□ -0.51
SLC6A20-201ENST00000353278 LZICQ8WZA0 190 aa11.87□□□□□ -0.51
SLC6A20-201ENST00000353278 TUBB6Q9BUF5 446 aa11.87□□□□□ -0.51
SLC6A20-201ENST00000353278 NAGPAQ9UK23 515 aa11.87□□□□□ -0.51
SLC6A20-201ENST00000353278 TTC7AQ9ULT0 858 aaPredicted RBP11.87□□□□□ -0.51
SLC6A20-201ENST00000353278 WDR91A4D1P6 747 aa11.86□□□□□ -0.51
SLC6A20-201ENST00000353278 C3orf70A6NLC5 250 aaPredicted RBP11.86□□□□□ -0.51
SLC6A20-201ENST00000353278 PRR29P0C7W0 189 aa11.86□□□□□ -0.51
SLC6A20-201ENST00000353278 COPS2P61201 443 aa11.86□□□□□ -0.51
SLC6A20-201ENST00000353278 GFPT1Q06210 699 aaPredicted RBP11.86□□□□□ -0.51
SLC6A20-201ENST00000353278 NBPF9Q3BBW0 867 aa11.86□□□□□ -0.51
SLC6A20-201ENST00000353278 ATPAF2Q8N5M1 289 aa11.86□□□□□ -0.51
SLC6A20-201ENST00000353278 AGPAT1Q99943 283 aa11.86□□□□□ -0.51
SLC6A20-201ENST00000353278 EPB41L4AQ9HCS5 686 aaPredicted RBP11.86□□□□□ -0.51
SLC6A20-201ENST00000353278 PPP1R9AQ9ULJ8 1098 aa11.86□□□□□ -0.51
SLC6A20-201ENST00000353278 NR2E3Q9Y5X4 410 aa11.86□□□□□ -0.51
SLC6A20-201ENST00000353278 LAMB3Q13751 1172 aa11.86□□□□□ -0.51
SLC6A20-201ENST00000353278 TDRD10Q5VZ19 366 aaKnown RBP11.86□□□□□ -0.51
SLC6A20-201ENST00000353278 CHSY1Q86X52 802 aa11.86□□□□□ -0.51
SLC6A20-201ENST00000353278 RBBP8NLQ8NC74 664 aaPredicted RBP11.86□□□□□ -0.51
SLC6A20-201ENST00000353278 RAPGEF5Q92565 580 aa11.86□□□□□ -0.51
SLC6A20-201ENST00000353278 MRPS31Q92665 395 aaKnown RBP11.86□□□□□ -0.51
SLC6A20-201ENST00000353278 NPHP3-ACAD11A0A0J9YXS1 232 aa11.86□□□□□ -0.51
SLC6A20-201ENST00000353278 PSMD3O43242 534 aa11.86□□□□□ -0.51
SLC6A20-201ENST00000353278 ANP32DO95626 131 aa11.86□□□□□ -0.51
SLC6A20-201ENST00000353278 AKT1P31749 480 aa11.86□□□□□ -0.51
SLC6A20-201ENST00000353278 HADHAP40939 763 aa11.86□□□□□ -0.51
SLC6A20-201ENST00000353278 TMPRSS15P98073 1019 aa11.86□□□□□ -0.51
SLC6A20-201ENST00000353278 DEUP1Q05D60 604 aa11.86□□□□□ -0.51
SLC6A20-201ENST00000353278 NFIAQ12857 509 aa11.86□□□□□ -0.51
SLC6A20-201ENST00000353278 ANKRD20A4Q4UJ75 823 aa11.86□□□□□ -0.51
SLC6A20-201ENST00000353278 SYTL3Q4VX76 610 aa11.86□□□□□ -0.51
SLC6A20-201ENST00000353278 GLE1Q53GS7 698 aaKnown RBP11.86□□□□□ -0.51
SLC6A20-201ENST00000353278 ANKRD20A8PQ5CZ79 823 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms