RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 IVDP26440 423 aa26.23■■□□□ 1.79
CPNE1-202ENST00000352393 CHKAP35790 457 aa26.23■■□□□ 1.79
CPNE1-202ENST00000352393 PTK6Q13882 451 aa26.23■■□□□ 1.79
CPNE1-202ENST00000352393 UGCGQ16739 394 aa26.23■■□□□ 1.79
CPNE1-202ENST00000352393 CLEC16AQ2KHT3 1053 aa26.23■■□□□ 1.79
CPNE1-202ENST00000352393 VSTM1Q6UX27 236 aa26.23■■□□□ 1.79
CPNE1-202ENST00000352393 SAAL1Q96ER3 474 aa26.23■■□□□ 1.79
CPNE1-202ENST00000352393 AGBL1Q96MI9 1066 aa26.23■■□□□ 1.79
CPNE1-202ENST00000352393 ACSL3O95573 720 aa26.22■■□□□ 1.79
CPNE1-202ENST00000352393 ICAM1P05362 532 aa26.22■■□□□ 1.79
CPNE1-202ENST00000352393 ITIH2P19823 946 aa26.22■■□□□ 1.79
CPNE1-202ENST00000352393 SYDE1Q6ZW31 735 aaPredicted RBP26.22■■□□□ 1.79
CPNE1-202ENST00000352393 SLC17A8Q8NDX2 589 aa26.22■■□□□ 1.79
CPNE1-202ENST00000352393 ARHGEF2Q92974 986 aaKnown RBP26.22■■□□□ 1.79
CPNE1-202ENST00000352393 CCDC127Q96BQ5 260 aa26.22■■□□□ 1.79
CPNE1-202ENST00000352393 SNF8Q96H20 258 aa26.22■■□□□ 1.79
CPNE1-202ENST00000352393 ABCF3Q9NUQ8 709 aa26.22■■□□□ 1.79
CPNE1-202ENST00000352393 CCPG1Q9ULG6 757 aa26.22■■□□□ 1.79
CPNE1-202ENST00000352393 PTGER2P43116 358 aa26.21■■□□□ 1.79
CPNE1-202ENST00000352393 SF3A3Q12874 501 aaKnown RBP eCLIP26.21■■□□□ 1.793e-8■■■□□ 16.9
CPNE1-202ENST00000352393 NEDD9Q14511 834 aa26.21■■□□□ 1.79
CPNE1-202ENST00000352393 TBC1D10BQ4KMP7 808 aaPredicted RBP26.21■■□□□ 1.79
CPNE1-202ENST00000352393 MAP4K3Q8IVH8 894 aa26.21■■□□□ 1.79
CPNE1-202ENST00000352393 FBXL13Q8NEE6 735 aa26.21■■□□□ 1.79
CPNE1-202ENST00000352393 TAS1R2Q8TE23 839 aa26.21■■□□□ 1.79
CPNE1-202ENST00000352393 DHX38Q92620 1227 aaKnown RBP26.21■■□□□ 1.79
CPNE1-202ENST00000352393 KIFAP3Q92845 792 aa26.21■■□□□ 1.79
CPNE1-202ENST00000352393 SCLT1Q96NL6 688 aa26.21■■□□□ 1.79
CPNE1-202ENST00000352393 CHST7Q9NS84 486 aa26.21■■□□□ 1.79
CPNE1-202ENST00000352393 ASIC3Q9UHC3 531 aa26.21■■□□□ 1.79
CPNE1-202ENST00000352393 TBX20Q9UMR3 447 aa26.21■■□□□ 1.79
CPNE1-202ENST00000352393 EXOC7Q9UPT5 735 aa26.21■■□□□ 1.79
CPNE1-202ENST00000352393 BRWD3Q6RI45 1802 aa26.21■■□□□ 1.79
CPNE1-202ENST00000352393 CNTNAP1P78357 1384 aa26.21■■□□□ 1.79
CPNE1-202ENST00000352393 TMEM120BA0PK00 339 aa26.21■■□□□ 1.79
CPNE1-202ENST00000352393 NFIBO00712 420 aa26.21■■□□□ 1.79
CPNE1-202ENST00000352393 MAN1A1P33908 653 aa26.21■■□□□ 1.79
CPNE1-202ENST00000352393 PCNX4Q63HM2 1172 aa26.21■■□□□ 1.79
CPNE1-202ENST00000352393 STYK1Q6J9G0 422 aa26.21■■□□□ 1.79
CPNE1-202ENST00000352393 HIBCHQ6NVY1 386 aaPredicted RBP26.21■■□□□ 1.79
CPNE1-202ENST00000352393 C4orf19Q8IY42 314 aa26.21■■□□□ 1.79
CPNE1-202ENST00000352393 CCDC63Q8NA47 563 aa26.21■■□□□ 1.79
CPNE1-202ENST00000352393 TMC2Q8TDI7 906 aa26.21■■□□□ 1.79
CPNE1-202ENST00000352393 FAM151AQ8WW52 585 aa26.21■■□□□ 1.79
CPNE1-202ENST00000352393 CLEC4DQ8WXI8 215 aa26.21■■□□□ 1.79
CPNE1-202ENST00000352393 TOPORSQ9NS56 1045 aaPredicted RBP26.21■■□□□ 1.79
CPNE1-202ENST00000352393 ANAPC7Q9UJX3 599 aa26.21■■□□□ 1.79
CPNE1-202ENST00000352393 SPDYE2BA6NHP3 402 aa26.2■■□□□ 1.79
CPNE1-202ENST00000352393 ATP6V1G2O95670 118 aa26.2■■□□□ 1.79
CPNE1-202ENST00000352393 SPDYE6P0CI01 402 aa26.2■■□□□ 1.79
CPNE1-202ENST00000352393 MRPS9P82933 396 aaKnown RBP26.2■■□□□ 1.79
CPNE1-202ENST00000352393 GHRHRQ02643 423 aa26.2■■□□□ 1.79
CPNE1-202ENST00000352393 MKRN4PQ13434 485 aaPredicted RBP26.2■■□□□ 1.79
CPNE1-202ENST00000352393 SNX1Q13596 522 aa26.2■■□□□ 1.79
CPNE1-202ENST00000352393 TMEM161BQ8NDZ6 487 aa26.2■■□□□ 1.79
CPNE1-202ENST00000352393 HERPUD2Q9BSE4 406 aa26.2■■□□□ 1.79
CPNE1-202ENST00000352393 ZNF219Q9P2Y4 722 aaPredicted RBP26.2■■□□□ 1.79
CPNE1-202ENST00000352393 CLRN2A0PK11 232 aa26.2■■□□□ 1.78
CPNE1-202ENST00000352393 YDJCA8MPS7 323 aa26.2■■□□□ 1.78
CPNE1-202ENST00000352393 TTC4O95801 387 aa26.2■■□□□ 1.78
CPNE1-202ENST00000352393 ATP5DP30049 168 aa26.2■■□□□ 1.78
CPNE1-202ENST00000352393 CAP2P40123 477 aa26.2■■□□□ 1.78
CPNE1-202ENST00000352393 LLGL1Q15334 1064 aa26.2■■□□□ 1.78
CPNE1-202ENST00000352393 OTUD6AQ7L8S5 288 aa26.2■■□□□ 1.78
CPNE1-202ENST00000352393 MAIP1Q8WWC4 291 aa26.2■■□□□ 1.78
CPNE1-202ENST00000352393 ATG4AQ8WYN0 398 aa26.2■■□□□ 1.78
CPNE1-202ENST00000352393 GLIS2Q9BZE0 524 aaPredicted RBP26.2■■□□□ 1.78
CPNE1-202ENST00000352393 AVENQ9NQS1 362 aaPredicted RBP26.2■■□□□ 1.78
CPNE1-202ENST00000352393 RAB20Q9NX57 234 aa26.2■■□□□ 1.78
CPNE1-202ENST00000352393 CFAP73A6NFT4 308 aa26.19■■□□□ 1.78
CPNE1-202ENST00000352393 CREB1P16220 341 aa26.19■■□□□ 1.78
CPNE1-202ENST00000352393 MAPK4P31152 587 aa26.19■■□□□ 1.78
CPNE1-202ENST00000352393 SLC8A1P32418 973 aa26.19■■□□□ 1.78
CPNE1-202ENST00000352393 LRRC14Q15048 493 aa26.19■■□□□ 1.78
CPNE1-202ENST00000352393 MFSD14AQ96MC6 490 aa26.19■■□□□ 1.78
CPNE1-202ENST00000352393 FBXL18Q96ME1 805 aa26.19■■□□□ 1.78
CPNE1-202ENST00000352393 USP15Q9Y4E8 981 aaPredicted RBP26.19■■□□□ 1.78
CPNE1-202ENST00000352393 GTF2H1P32780 548 aa26.18■■□□□ 1.78
CPNE1-202ENST00000352393 MTMR1Q13613 665 aa26.18■■□□□ 1.78
CPNE1-202ENST00000352393 FAM102BQ5T8I3 360 aa26.18■■□□□ 1.78
CPNE1-202ENST00000352393 GPATCH11Q8N954 259 aa26.18■■□□□ 1.78
CPNE1-202ENST00000352393 DYDC1Q8WWB3 177 aa26.18■■□□□ 1.78
CPNE1-202ENST00000352393 AKT1S1Q96B36 256 aa26.18■■□□□ 1.78
CPNE1-202ENST00000352393 DCLK3Q9C098 648 aa26.18■■□□□ 1.78
CPNE1-202ENST00000352393 CXorf56Q9H5V9 222 aa26.18■■□□□ 1.78
CPNE1-202ENST00000352393 FGFR1OP2Q9NVK5 253 aa26.18■■□□□ 1.78
CPNE1-202ENST00000352393 AGAP1Q9UPQ3 857 aa26.18■■□□□ 1.78
CPNE1-202ENST00000352393 CD2APQ9Y5K6 639 aa26.18■■□□□ 1.78
CPNE1-202ENST00000352393 MROH7Q68CQ1 1323 aa26.18■■□□□ 1.78
CPNE1-202ENST00000352393 TCEA3O75764 348 aa26.18■■□□□ 1.78
CPNE1-202ENST00000352393 UNGP13051 313 aaPredicted RBP26.18■■□□□ 1.78
CPNE1-202ENST00000352393 CNGA1P29973 690 aa26.18■■□□□ 1.78
CPNE1-202ENST00000352393 ITGA8P53708 1063 aa26.18■■□□□ 1.78
CPNE1-202ENST00000352393 CAV1Q03135 178 aa26.18■■□□□ 1.78
CPNE1-202ENST00000352393 FAM133BQ5BKY9 247 aaKnown RBP26.18■■□□□ 1.78
CPNE1-202ENST00000352393 CEP57Q86XR8 500 aa26.18■■□□□ 1.78
CPNE1-202ENST00000352393 MGARPQ8TDB4 240 aa26.18■■□□□ 1.78
CPNE1-202ENST00000352393 GRK7Q8WTQ7 553 aa26.18■■□□□ 1.78
CPNE1-202ENST00000352393 C7orf43Q8WVR3 580 aa26.18■■□□□ 1.78
CPNE1-202ENST00000352393 NOD2Q9HC29 1040 aa26.18■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms