RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 HOXC6P09630 235 aa7.46□□□□□ -1.22
TRIM55-203ENST00000350034 DLATP10515 647 aaKnown RBP7.46□□□□□ -1.22
TRIM55-203ENST00000350034 GZMAP12544 262 aa7.46□□□□□ -1.22
TRIM55-203ENST00000350034 INSRRP14616 1297 aa7.46□□□□□ -1.22
TRIM55-203ENST00000350034 ADCYAP1R1P41586 468 aa7.46□□□□□ -1.22
TRIM55-203ENST00000350034 ACOT2P49753 483 aa7.46□□□□□ -1.22
TRIM55-203ENST00000350034 AP3M2P53677 418 aa7.46□□□□□ -1.22
TRIM55-203ENST00000350034 FMO1Q01740 532 aa7.46□□□□□ -1.22
TRIM55-203ENST00000350034 POU5F1Q01860 360 aaKnown RBP7.46□□□□□ -1.22
TRIM55-203ENST00000350034 MKRN3Q13064 507 aaKnown RBP7.46□□□□□ -1.22
TRIM55-203ENST00000350034 TFDP1Q14186 410 aa7.46□□□□□ -1.22
TRIM55-203ENST00000350034 MAPK6Q16659 721 aa7.46□□□□□ -1.22
TRIM55-203ENST00000350034 FAM187BQ17R55 369 aa7.46□□□□□ -1.22
TRIM55-203ENST00000350034 DUSP28Q4G0W2 176 aa7.46□□□□□ -1.22
TRIM55-203ENST00000350034 MORN1Q5T089 497 aa7.46□□□□□ -1.22
TRIM55-203ENST00000350034 GJC2Q5T442 439 aaPredicted RBP7.46□□□□□ -1.22
TRIM55-203ENST00000350034 TDRD10Q5VZ19 366 aaKnown RBP7.46□□□□□ -1.22
TRIM55-203ENST00000350034 IQSEC1Q6DN90 963 aa7.46□□□□□ -1.22
TRIM55-203ENST00000350034 CC2D1AQ6P1N0 951 aaPredicted RBP7.46□□□□□ -1.22
TRIM55-203ENST00000350034 WDR93Q6P2C0 686 aa7.46□□□□□ -1.22
TRIM55-203ENST00000350034 NFRKBQ6P4R8 1299 aa7.46□□□□□ -1.22
TRIM55-203ENST00000350034 TSHZ1Q6ZSZ6 1077 aa7.46□□□□□ -1.22
TRIM55-203ENST00000350034 NOP9Q86U38 636 aaKnown RBP7.46□□□□□ -1.22
TRIM55-203ENST00000350034 DNAAF5Q86Y56 855 aa7.46□□□□□ -1.22
TRIM55-203ENST00000350034 PALB2Q86YC2 1186 aa7.46□□□□□ -1.22
TRIM55-203ENST00000350034 RASAL3Q86YV0 1011 aa7.46□□□□□ -1.22
TRIM55-203ENST00000350034 ZBTB8OSQ8IWT0 167 aa7.46□□□□□ -1.22
TRIM55-203ENST00000350034 RPUSD2Q8IZ73 545 aaKnown RBP7.46□□□□□ -1.22
TRIM55-203ENST00000350034 LRRC71Q8N4P6 559 aa7.46□□□□□ -1.22
TRIM55-203ENST00000350034 RNF149Q8NC42 400 aa7.46□□□□□ -1.22
TRIM55-203ENST00000350034 NPLOC4Q8TAT6 608 aa7.46□□□□□ -1.22
TRIM55-203ENST00000350034 AFG1LQ8WV93 481 aa7.46□□□□□ -1.22
TRIM55-203ENST00000350034 TRAPPC12Q8WVT3 735 aa7.46□□□□□ -1.22
TRIM55-203ENST00000350034 DDX1Q92499 740 aaKnown RBP7.46□□□□□ -1.22
TRIM55-203ENST00000350034 CALR3Q96L12 384 aaKnown RBP7.46□□□□□ -1.22
TRIM55-203ENST00000350034 PNKPQ96T60 521 aa7.46□□□□□ -1.22
TRIM55-203ENST00000350034 MSTO1Q9BUK6 570 aa7.46□□□□□ -1.22
TRIM55-203ENST00000350034 SUGCTQ9HAC7 445 aa7.46□□□□□ -1.22
TRIM55-203ENST00000350034 ARGLU1Q9NWB6 273 aaPredicted RBP7.46□□□□□ -1.22
TRIM55-203ENST00000350034 TAS2R14Q9NYV8 317 aa7.46□□□□□ -1.22
TRIM55-203ENST00000350034 RBAKQ9NYW8 714 aaPredicted RBP7.46□□□□□ -1.22
TRIM55-203ENST00000350034 CPSF3Q9UKF6 684 aaKnown RBP7.46□□□□□ -1.22
TRIM55-203ENST00000350034 CNTN6Q9UQ52 1028 aa7.46□□□□□ -1.22
TRIM55-203ENST00000350034 ZNF236Q9UL36 1845 aa7.45□□□□□ -1.22
TRIM55-203ENST00000350034 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.45□□□□□ -1.22
TRIM55-203ENST00000350034 MANSC4A6NHS7 340 aaPredicted RBP7.45□□□□□ -1.22
TRIM55-203ENST00000350034 IGF2BP3O00425 579 aaKnown RBP eCLIP7.45□□□□□ -1.22
TRIM55-203ENST00000350034 OGTO15294 1046 aa7.45□□□□□ -1.22
TRIM55-203ENST00000350034 CLDN3O15551 220 aa7.45□□□□□ -1.22
TRIM55-203ENST00000350034 RTN2O75298 545 aa7.45□□□□□ -1.22
TRIM55-203ENST00000350034 KIF4AO95239 1232 aa7.45□□□□□ -1.22
TRIM55-203ENST00000350034 FTCDO95954 541 aa7.45□□□□□ -1.22
TRIM55-203ENST00000350034 CYP11B1P15538 503 aa7.45□□□□□ -1.22
TRIM55-203ENST00000350034 SMPD1P17405 629 aa7.45□□□□□ -1.22
TRIM55-203ENST00000350034 ACO1P21399 889 aaKnown RBP7.45□□□□□ -1.22
TRIM55-203ENST00000350034 PLA2G5P39877 138 aa7.45□□□□□ -1.22
TRIM55-203ENST00000350034 CLCN3P51790 818 aa7.45□□□□□ -1.22
TRIM55-203ENST00000350034 NAP1L1P55209 391 aaKnown RBP7.45□□□□□ -1.22
TRIM55-203ENST00000350034 CDR2Q01850 454 aa7.45□□□□□ -1.22
TRIM55-203ENST00000350034 MBTD1Q05BQ5 628 aa7.45□□□□□ -1.22
TRIM55-203ENST00000350034 MAP2K5Q13163 448 aa7.45□□□□□ -1.22
TRIM55-203ENST00000350034 ACVR2BQ13705 512 aa7.45□□□□□ -1.22
TRIM55-203ENST00000350034 SURF1Q15526 300 aa7.45□□□□□ -1.22
TRIM55-203ENST00000350034 AMHR2Q16671 573 aa7.45□□□□□ -1.22
TRIM55-203ENST00000350034 EFCAB12Q6NXP0 572 aa7.45□□□□□ -1.22
TRIM55-203ENST00000350034 TMCO3Q6UWJ1 677 aa7.45□□□□□ -1.22
TRIM55-203ENST00000350034 MPZL3Q6UWV2 235 aa7.45□□□□□ -1.22
TRIM55-203ENST00000350034 DPP9Q86TI2 863 aa7.45□□□□□ -1.22
TRIM55-203ENST00000350034 NT5DC3Q86UY8 548 aa7.45□□□□□ -1.22
TRIM55-203ENST00000350034 SLC47A2Q86VL8 602 aa7.45□□□□□ -1.22
TRIM55-203ENST00000350034 WDR49Q8IV35 697 aa7.45□□□□□ -1.22
TRIM55-203ENST00000350034 PPM1KQ8N3J5 372 aa7.45□□□□□ -1.22
TRIM55-203ENST00000350034 UBR7Q8N806 425 aa7.45□□□□□ -1.22
TRIM55-203ENST00000350034 SPATA4Q8NEY3 305 aa7.45□□□□□ -1.22
TRIM55-203ENST00000350034 OR5B17Q8NGF7 314 aa7.45□□□□□ -1.22
TRIM55-203ENST00000350034 UBE2Q2Q8WVN8 375 aa7.45□□□□□ -1.22
TRIM55-203ENST00000350034 LMBR1Q8WVP7 490 aa7.45□□□□□ -1.22
TRIM55-203ENST00000350034 RUBCNQ92622 972 aa7.45□□□□□ -1.22
TRIM55-203ENST00000350034 USP6NLQ92738 828 aa7.45□□□□□ -1.22
TRIM55-203ENST00000350034 ARHGEF26Q96DR7 871 aa7.45□□□□□ -1.22
TRIM55-203ENST00000350034 PBKQ96KB5 322 aa7.45□□□□□ -1.22
TRIM55-203ENST00000350034 FAM84AQ96KN4 292 aa7.45□□□□□ -1.22
TRIM55-203ENST00000350034 CAPZA3Q96KX2 299 aa7.45□□□□□ -1.22
TRIM55-203ENST00000350034 FNBP1Q96RU3 617 aa7.45□□□□□ -1.22
TRIM55-203ENST00000350034 TINF2Q9BSI4 451 aa7.45□□□□□ -1.22
TRIM55-203ENST00000350034 PI4K2AQ9BTU6 479 aa7.45□□□□□ -1.22
TRIM55-203ENST00000350034 MCOLN1Q9GZU1 580 aa7.45□□□□□ -1.22
TRIM55-203ENST00000350034 ABHD16BQ9H3Z7 469 aa7.45□□□□□ -1.22
TRIM55-203ENST00000350034 IFT122Q9HBG6 1241 aa7.45□□□□□ -1.22
TRIM55-203ENST00000350034 APOBEC3GQ9HC16 384 aaKnown RBP7.45□□□□□ -1.22
TRIM55-203ENST00000350034 TRPC6Q9Y210 931 aa7.45□□□□□ -1.22
TRIM55-203ENST00000350034 TNFSF13BQ9Y275 285 aa7.45□□□□□ -1.22
TRIM55-203ENST00000350034 MYH9P35579 1960 aaKnown RBP7.45□□□□□ -1.22
TRIM55-203ENST00000350034 B4GALT4O60513 344 aa7.44□□□□□ -1.22
TRIM55-203ENST00000350034 BUB1BO60566 1050 aaPredicted RBP7.44□□□□□ -1.22
TRIM55-203ENST00000350034 FTLP02792 175 aaPredicted RBP7.44□□□□□ -1.22
TRIM55-203ENST00000350034 CYP1A2P05177 515 aa7.44□□□□□ -1.22
TRIM55-203ENST00000350034 GJB1P08034 283 aa7.44□□□□□ -1.22
TRIM55-203ENST00000350034 MMP3P08254 477 aa7.44□□□□□ -1.22
TRIM55-203ENST00000350034 MMEP08473 750 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms