RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 MRPS25P82663 173 aaKnown RBP17.95■□□□□ 0.46
SAMM50-201ENST00000350028 NNTQ13423 1086 aa17.95■□□□□ 0.46
SAMM50-201ENST00000350028 PTPROQ16827 1216 aa17.95■□□□□ 0.46
SAMM50-201ENST00000350028 HSDL1Q3SXM5 330 aa17.95■□□□□ 0.46
SAMM50-201ENST00000350028 ZNF677Q86XU0 584 aa17.95■□□□□ 0.46
SAMM50-201ENST00000350028 CAVIN3Q969G5 261 aa17.95■□□□□ 0.46
SAMM50-201ENST00000350028 RPS6KC1Q96S38 1066 aa17.95■□□□□ 0.46
SAMM50-201ENST00000350028 CARD9Q9H257 536 aa17.95■□□□□ 0.46
SAMM50-201ENST00000350028 ZCCHC17Q9NP64 241 aaKnown RBP17.95■□□□□ 0.46
SAMM50-201ENST00000350028 NMRK2Q9NPI5 230 aa17.95■□□□□ 0.46
SAMM50-201ENST00000350028 IGKV6-21A0A0C4DH24 114 aa17.94■□□□□ 0.46
SAMM50-201ENST00000350028 CYP1A2P05177 515 aa17.94■□□□□ 0.46
SAMM50-201ENST00000350028 GLI1P08151 1106 aa17.94■□□□□ 0.46
SAMM50-201ENST00000350028 GJA5P36382 358 aa17.94■□□□□ 0.46
SAMM50-201ENST00000350028 PIK3CAP42336 1068 aa17.94■□□□□ 0.46
SAMM50-201ENST00000350028 PAK2Q13177 524 aa17.94■□□□□ 0.46
SAMM50-201ENST00000350028 PLCB4Q15147 1175 aa17.94■□□□□ 0.46
SAMM50-201ENST00000350028 WDR78Q5VTH9 848 aa17.94■□□□□ 0.46
SAMM50-201ENST00000350028 TDRD10Q5VZ19 366 aaKnown RBP17.94■□□□□ 0.46
SAMM50-201ENST00000350028 ACAD10Q6JQN1 1059 aa17.94■□□□□ 0.46
SAMM50-201ENST00000350028 SND1Q7KZF4 910 aaKnown RBP eCLIP17.94■□□□□ 0.46
SAMM50-201ENST00000350028 ZBTB8OSQ8IWT0 167 aa17.94■□□□□ 0.46
SAMM50-201ENST00000350028 KLHL7Q8IXQ5 586 aa17.94■□□□□ 0.46
SAMM50-201ENST00000350028 EIF1ADQ8N9N8 165 aaKnown RBP17.94■□□□□ 0.46
SAMM50-201ENST00000350028 DDX1Q92499 740 aaKnown RBP17.94■□□□□ 0.46
SAMM50-201ENST00000350028 CCDC102AQ96A19 550 aa17.94■□□□□ 0.46
SAMM50-201ENST00000350028 SPATA33Q96N06 139 aa17.94■□□□□ 0.46
SAMM50-201ENST00000350028 PI4K2AQ9BTU6 479 aa17.94■□□□□ 0.46
SAMM50-201ENST00000350028 MRPL4Q9BYD3 311 aaKnown RBP17.94■□□□□ 0.46
SAMM50-201ENST00000350028 C2orf40Q9H1Z8 148 aa17.94■□□□□ 0.46
SAMM50-201ENST00000350028 SMARCAD1Q9H4L7 1026 aa17.94■□□□□ 0.46
SAMM50-201ENST00000350028 EPB41L5Q9HCM4 733 aa17.94■□□□□ 0.46
SAMM50-201ENST00000350028 ALG6Q9Y672 507 aa17.94■□□□□ 0.46
SAMM50-201ENST00000350028 DCAF8L1A6NGE4 600 aa17.93■□□□□ 0.46
SAMM50-201ENST00000350028 KRIT1O00522 736 aa17.93■□□□□ 0.46
SAMM50-201ENST00000350028 CLSTN1O94985 981 aa17.93■□□□□ 0.46
SAMM50-201ENST00000350028 KRT5P13647 590 aa17.93■□□□□ 0.46
SAMM50-201ENST00000350028 AP3M2P53677 418 aa17.93■□□□□ 0.46
SAMM50-201ENST00000350028 GUCY2DQ02846 1103 aa17.93■□□□□ 0.46
SAMM50-201ENST00000350028 BIRC3Q13489 604 aa17.93■□□□□ 0.46
SAMM50-201ENST00000350028 TTLL4Q14679 1199 aa17.93■□□□□ 0.46
SAMM50-201ENST00000350028 EAPPQ56P03 285 aaPredicted RBP17.93■□□□□ 0.46
SAMM50-201ENST00000350028 CDCA2Q69YH5 1023 aaPredicted RBP17.93■□□□□ 0.46
SAMM50-201ENST00000350028 FBXO16Q8IX29 292 aaPredicted RBP17.93■□□□□ 0.46
SAMM50-201ENST00000350028 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.93■□□□□ 0.464e-8■■■■■ 36.3
SAMM50-201ENST00000350028 NAP1L3Q99457 506 aaPredicted RBP17.93■□□□□ 0.46
SAMM50-201ENST00000350028 HINFPQ9BQA5 517 aa17.93■□□□□ 0.46
SAMM50-201ENST00000350028 CCDC113Q9H0I3 377 aa17.93■□□□□ 0.46
SAMM50-201ENST00000350028 ANKFY1Q9P2R3 1169 aa17.93■□□□□ 0.46
SAMM50-201ENST00000350028 GTF3C4Q9UKN8 822 aa17.93■□□□□ 0.46
SAMM50-201ENST00000350028 CLDN3O15551 220 aa17.92■□□□□ 0.46
SAMM50-201ENST00000350028 RAD51CO43502 376 aa17.92■□□□□ 0.46
SAMM50-201ENST00000350028 TXNP10599 105 aaKnown RBP17.92■□□□□ 0.46
SAMM50-201ENST00000350028 MARK3P27448 753 aa17.92■□□□□ 0.46
SAMM50-201ENST00000350028 WNT7BP56706 349 aa17.92■□□□□ 0.46
SAMM50-201ENST00000350028 CCNA1P78396 465 aa17.92■□□□□ 0.46
SAMM50-201ENST00000350028 LAMTOR4Q0VGL1 99 aa17.92■□□□□ 0.46
SAMM50-201ENST00000350028 GRM1Q13255 1194 aa17.92■□□□□ 0.46
SAMM50-201ENST00000350028 DRP2Q13474 957 aa17.92■□□□□ 0.46
SAMM50-201ENST00000350028 PPP2R5EQ16537 467 aa17.92■□□□□ 0.46
SAMM50-201ENST00000350028 LMBRD2Q68DH5 695 aaPredicted RBP17.92■□□□□ 0.46
SAMM50-201ENST00000350028 SLITRK6Q9H5Y7 841 aa17.92■□□□□ 0.46
SAMM50-201ENST00000350028 ACP6Q9NPH0 428 aa17.92■□□□□ 0.46
SAMM50-201ENST00000350028 UVRAGQ9P2Y5 699 aa17.92■□□□□ 0.46
SAMM50-201ENST00000350028 PCDHB2Q9Y5E7 798 aa17.92■□□□□ 0.46
SAMM50-201ENST00000350028 CNTNAP2Q9UHC6 1331 aa17.92■□□□□ 0.46
SAMM50-201ENST00000350028 ZBTB42B2RXF5 422 aa17.92■□□□□ 0.46
SAMM50-201ENST00000350028 HBP1O60381 514 aa17.92■□□□□ 0.46
SAMM50-201ENST00000350028 MSCO60682 206 aa17.92■□□□□ 0.46
SAMM50-201ENST00000350028 TOM1L1O75674 476 aa17.92■□□□□ 0.46
SAMM50-201ENST00000350028 VNN1O95497 513 aa17.92■□□□□ 0.46
SAMM50-201ENST00000350028 EDN1P05305 212 aa17.92■□□□□ 0.46
SAMM50-201ENST00000350028 MKRN4PQ13434 485 aaPredicted RBP17.92■□□□□ 0.46
SAMM50-201ENST00000350028 CLEC16AQ2KHT3 1053 aa17.92■□□□□ 0.46
SAMM50-201ENST00000350028 PNMA8AQ86V59 439 aaPredicted RBP17.92■□□□□ 0.46
SAMM50-201ENST00000350028 BRSK2Q8IWQ3 736 aa17.92■□□□□ 0.46
SAMM50-201ENST00000350028 UBL4BQ8N7F7 174 aa17.92■□□□□ 0.46
SAMM50-201ENST00000350028 CCDC26Q8TAB7 109 aa17.92■□□□□ 0.46
SAMM50-201ENST00000350028 TBXAS1P24557 533 aaPredicted RBP17.91■□□□□ 0.46
SAMM50-201ENST00000350028 TFDP1Q14186 410 aa17.91■□□□□ 0.46
SAMM50-201ENST00000350028 SURF1Q15526 300 aa17.91■□□□□ 0.46
SAMM50-201ENST00000350028 MAPK6Q16659 721 aa17.91■□□□□ 0.46
SAMM50-201ENST00000350028 ZBTB41Q5SVQ8 909 aa17.91■□□□□ 0.46
SAMM50-201ENST00000350028 GPRC5AQ8NFJ5 357 aa17.91■□□□□ 0.46
SAMM50-201ENST00000350028 ZNF653Q96CK0 615 aa17.91■□□□□ 0.46
SAMM50-201ENST00000350028 GDAP1L1Q96MZ0 367 aa17.91■□□□□ 0.46
SAMM50-201ENST00000350028 ACO2Q99798 780 aaKnown RBP17.91■□□□□ 0.46
SAMM50-201ENST00000350028 AP1M1Q9BXS5 423 aa17.91■□□□□ 0.46
SAMM50-201ENST00000350028 WNT8AQ9H1J5 351 aa17.91■□□□□ 0.46
SAMM50-201ENST00000350028 SLC45A1Q9Y2W3 748 aa17.91■□□□□ 0.46
SAMM50-201ENST00000350028 PTPRJQ12913 1337 aa17.91■□□□□ 0.46
SAMM50-201ENST00000350028 OGTO15294 1046 aa17.9■□□□□ 0.46
SAMM50-201ENST00000350028 ASAP2O43150 1006 aa17.9■□□□□ 0.46
SAMM50-201ENST00000350028 SART1O43290 800 aaKnown RBP17.9■□□□□ 0.46
SAMM50-201ENST00000350028 PHACTR2O75167 634 aa17.9■□□□□ 0.46
SAMM50-201ENST00000350028 PRKCBP05771 671 aa17.9■□□□□ 0.46
SAMM50-201ENST00000350028 SRGAP2CP0DJJ0 459 aa17.9■□□□□ 0.46
SAMM50-201ENST00000350028 CARSP49589 748 aaKnown RBP17.9■□□□□ 0.46
SAMM50-201ENST00000350028 CUL2Q13617 745 aa17.9■□□□□ 0.46
SAMM50-201ENST00000350028 MAATS1Q7Z4T9 603 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms