RNA–Protein interactions for RNA: ENST00000348639.7

CHRNA3-202, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA3, Length 2,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-202ENST00000348639 EDN1P05305 212 aa21.89■■□□□ 1.1
CHRNA3-202ENST00000348639 HSP90B2PQ58FF3 399 aa21.89■■□□□ 1.1
CHRNA3-202ENST00000348639 WDR44Q5JSH3 913 aa21.89■■□□□ 1.1
CHRNA3-202ENST00000348639 TDRD10Q5VZ19 366 aaKnown RBP21.89■■□□□ 1.1
CHRNA3-202ENST00000348639 ZPBP2Q6X784 338 aa21.89■■□□□ 1.1
CHRNA3-202ENST00000348639 SHCBP1Q8NEM2 672 aa21.89■■□□□ 1.1
CHRNA3-202ENST00000348639 ATP8B4Q8TF62 1192 aa21.89■■□□□ 1.1
CHRNA3-202ENST00000348639 TCP11Q8WWU5 503 aa21.89■■□□□ 1.1
CHRNA3-202ENST00000348639 DHX38Q92620 1227 aaKnown RBP21.89■■□□□ 1.1
CHRNA3-202ENST00000348639 CCDC188H7C350 402 aa21.89■■□□□ 1.09
CHRNA3-202ENST00000348639 HLA-DRAP01903 254 aa21.89■■□□□ 1.09
CHRNA3-202ENST00000348639 LMBRD2Q68DH5 695 aaPredicted RBP21.89■■□□□ 1.09
CHRNA3-202ENST00000348639 DHX37Q8IY37 1157 aaKnown RBP21.89■■□□□ 1.09
CHRNA3-202ENST00000348639 CCDC102AQ96A19 550 aa21.89■■□□□ 1.09
CHRNA3-202ENST00000348639 ELMO3Q96BJ8 720 aa21.89■■□□□ 1.09
CHRNA3-202ENST00000348639 FAM84AQ96KN4 292 aa21.89■■□□□ 1.09
CHRNA3-202ENST00000348639 SPATA33Q96N06 139 aa21.89■■□□□ 1.09
CHRNA3-202ENST00000348639 ZC3H4Q9UPT8 1303 aaKnown RBP21.88■■□□□ 1.09
CHRNA3-202ENST00000348639 SCN4AP35499 1836 aa21.88■■□□□ 1.09
CHRNA3-202ENST00000348639 RAD51CO43502 376 aa21.88■■□□□ 1.09
CHRNA3-202ENST00000348639 GUCY2DQ02846 1103 aa21.88■■□□□ 1.09
CHRNA3-202ENST00000348639 KLHL7Q8IXQ5 586 aa21.88■■□□□ 1.09
CHRNA3-202ENST00000348639 FAM71BQ8TC56 605 aa21.88■■□□□ 1.09
CHRNA3-202ENST00000348639 UBE2Q2Q8WVN8 375 aa21.88■■□□□ 1.09
CHRNA3-202ENST00000348639 COPS5Q92905 334 aa21.88■■□□□ 1.09
CHRNA3-202ENST00000348639 CAVIN3Q969G5 261 aa21.88■■□□□ 1.09
CHRNA3-202ENST00000348639 CARD9Q9H257 536 aa21.88■■□□□ 1.09
CHRNA3-202ENST00000348639 EPB41L5Q9HCM4 733 aa21.88■■□□□ 1.09
CHRNA3-202ENST00000348639 ALG6Q9Y672 507 aa21.88■■□□□ 1.09
CHRNA3-202ENST00000348639 MCM3APO60318 1980 aa21.88■■□□□ 1.09
CHRNA3-202ENST00000348639 IGKV6-21A0A0C4DH24 114 aa21.87■■□□□ 1.09
CHRNA3-202ENST00000348639 ZBTB42B2RXF5 422 aa21.87■■□□□ 1.09
CHRNA3-202ENST00000348639 TXNP10599 105 aaKnown RBP21.87■■□□□ 1.09
CHRNA3-202ENST00000348639 KRT5P13647 590 aa21.87■■□□□ 1.09
CHRNA3-202ENST00000348639 PIK3CAP42336 1068 aa21.87■■□□□ 1.09
CHRNA3-202ENST00000348639 MXD4Q14582 209 aaPredicted RBP21.87■■□□□ 1.09
CHRNA3-202ENST00000348639 ZBTB41Q5SVQ8 909 aa21.87■■□□□ 1.09
CHRNA3-202ENST00000348639 TMEM63BQ5T3F8 832 aa21.87■■□□□ 1.09
CHRNA3-202ENST00000348639 CDCA2Q69YH5 1023 aaPredicted RBP21.87■■□□□ 1.09
CHRNA3-202ENST00000348639 SND1Q7KZF4 910 aaKnown RBP eCLIP21.87■■□□□ 1.09
CHRNA3-202ENST00000348639 CGRRF1Q99675 332 aa21.87■■□□□ 1.09
CHRNA3-202ENST00000348639 CCDC113Q9H0I3 377 aa21.87■■□□□ 1.09
CHRNA3-202ENST00000348639 PTPRJQ12913 1337 aa21.87■■□□□ 1.09
CHRNA3-202ENST00000348639 PDHXO00330 501 aa21.87■■□□□ 1.09
CHRNA3-202ENST00000348639 KRIT1O00522 736 aa21.87■■□□□ 1.09
CHRNA3-202ENST00000348639 GRIN3BO60391 1043 aa21.87■■□□□ 1.09
CHRNA3-202ENST00000348639 VNN1O95497 513 aa21.87■■□□□ 1.09
CHRNA3-202ENST00000348639 CYP1A2P05177 515 aa21.87■■□□□ 1.09
CHRNA3-202ENST00000348639 SLC26A2P50443 739 aa21.87■■□□□ 1.09
CHRNA3-202ENST00000348639 NNTQ13423 1086 aa21.87■■□□□ 1.09
CHRNA3-202ENST00000348639 MKRN4PQ13434 485 aaPredicted RBP21.87■■□□□ 1.09
CHRNA3-202ENST00000348639 BIRC3Q13489 604 aa21.87■■□□□ 1.09
CHRNA3-202ENST00000348639 GPRC5AQ8NFJ5 357 aa21.87■■□□□ 1.09
CHRNA3-202ENST00000348639 AP1M1Q9BXS5 423 aa21.87■■□□□ 1.09
CHRNA3-202ENST00000348639 PDGFCQ9NRA1 345 aa21.87■■□□□ 1.09
CHRNA3-202ENST00000348639 CNTNAP2Q9UHC6 1331 aa21.87■■□□□ 1.09
CHRNA3-202ENST00000348639 MIF4GDA9UHW6 222 aaKnown RBP21.86■■□□□ 1.09
CHRNA3-202ENST00000348639 CLDN3O15551 220 aa21.86■■□□□ 1.09
CHRNA3-202ENST00000348639 MSCO60682 206 aa21.86■■□□□ 1.09
CHRNA3-202ENST00000348639 LAMTOR4Q0VGL1 99 aa21.86■■□□□ 1.09
CHRNA3-202ENST00000348639 PAK2Q13177 524 aa21.86■■□□□ 1.09
CHRNA3-202ENST00000348639 PLCB4Q15147 1175 aa21.86■■□□□ 1.09
CHRNA3-202ENST00000348639 DCAF12L1Q5VU92 463 aa21.86■■□□□ 1.09
CHRNA3-202ENST00000348639 GTF3C2Q8WUA4 911 aaPredicted RBP21.86■■□□□ 1.09
CHRNA3-202ENST00000348639 MRPL4Q9BYD3 311 aaKnown RBP21.86■■□□□ 1.09
CHRNA3-202ENST00000348639 GTF3C4Q9UKN8 822 aa21.86■■□□□ 1.09
CHRNA3-202ENST00000348639 ZNFX1Q9P2E3 1918 aaKnown RBP21.86■■□□□ 1.09
CHRNA3-202ENST00000348639 ASB14A6NK59 587 aa21.85■■□□□ 1.09
CHRNA3-202ENST00000348639 TOM1L1O75674 476 aa21.85■■□□□ 1.09
CHRNA3-202ENST00000348639 CARSP49589 748 aaKnown RBP21.85■■□□□ 1.09
CHRNA3-202ENST00000348639 ACAD10Q6JQN1 1059 aa21.85■■□□□ 1.09
CHRNA3-202ENST00000348639 RPS6KC1Q96S38 1066 aa21.85■■□□□ 1.09
CHRNA3-202ENST00000348639 JPH2Q9BR39 696 aaPredicted RBP21.85■■□□□ 1.09
CHRNA3-202ENST00000348639 SMARCAD1Q9H4L7 1026 aa21.85■■□□□ 1.09
CHRNA3-202ENST00000348639 PCDHB2Q9Y5E7 798 aa21.85■■□□□ 1.09
CHRNA3-202ENST00000348639 ZSCAN5CA6NGD5 496 aaPredicted RBP21.85■■□□□ 1.09
CHRNA3-202ENST00000348639 SART1O43290 800 aaKnown RBP21.85■■□□□ 1.09
CHRNA3-202ENST00000348639 BPIFB4P59827 614 aa21.85■■□□□ 1.09
CHRNA3-202ENST00000348639 TTLL4Q14679 1199 aa21.85■■□□□ 1.09
CHRNA3-202ENST00000348639 CLUL1Q15846 466 aa21.85■■□□□ 1.09
CHRNA3-202ENST00000348639 CLEC16AQ2KHT3 1053 aa21.85■■□□□ 1.09
CHRNA3-202ENST00000348639 ZNF677Q86XU0 584 aa21.85■■□□□ 1.09
CHRNA3-202ENST00000348639 CCL15-CCL14A0A0B4J2E2 113 aa21.84■■□□□ 1.09
CHRNA3-202ENST00000348639 TTLL13PA6NNM8 815 aa21.84■■□□□ 1.09
CHRNA3-202ENST00000348639 SYF2O95926 243 aaKnown RBP21.84■■□□□ 1.09
CHRNA3-202ENST00000348639 FGGP02679 453 aa21.84■■□□□ 1.09
CHRNA3-202ENST00000348639 SRGAP2CP0DJJ0 459 aa21.84■■□□□ 1.09
CHRNA3-202ENST00000348639 CETPP11597 493 aa21.84■■□□□ 1.09
CHRNA3-202ENST00000348639 CCL15Q16663 113 aa21.84■■□□□ 1.09
CHRNA3-202ENST00000348639 ARMCX2Q7L311 632 aa21.84■■□□□ 1.09
CHRNA3-202ENST00000348639 ZBTB8OSQ8IWT0 167 aa21.84■■□□□ 1.09
CHRNA3-202ENST00000348639 LRRC71Q8N4P6 559 aa21.84■■□□□ 1.09
CHRNA3-202ENST00000348639 EIF1ADQ8N9N8 165 aaKnown RBP21.84■■□□□ 1.09
CHRNA3-202ENST00000348639 CASKIN2Q8WXE0 1202 aa21.84■■□□□ 1.09
CHRNA3-202ENST00000348639 ZNF653Q96CK0 615 aa21.84■■□□□ 1.09
CHRNA3-202ENST00000348639 NAP1L3Q99457 506 aaPredicted RBP21.84■■□□□ 1.09
CHRNA3-202ENST00000348639 C2orf40Q9H1Z8 148 aa21.84■■□□□ 1.09
CHRNA3-202ENST00000348639 SLITRK6Q9H5Y7 841 aa21.84■■□□□ 1.09
CHRNA3-202ENST00000348639 UVRAGQ9P2Y5 699 aa21.84■■□□□ 1.09
CHRNA3-202ENST00000348639 ESYT3A0FGR9 886 aa21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms