RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 RAB27AP51159 221 aa29.36■■■□□ 2.29
SSBP4-202ENST00000348495 UBXN1Q04323 297 aa29.36■■■□□ 2.29
SSBP4-202ENST00000348495 SURF1Q15526 300 aa29.36■■■□□ 2.29
SSBP4-202ENST00000348495 TCTN1Q2MV58 587 aa29.36■■■□□ 2.29
SSBP4-202ENST00000348495 TSPYL2Q9H2G4 693 aaPredicted RBP29.36■■■□□ 2.29
SSBP4-202ENST00000348495 PLEKHA5Q9HAU0 1116 aa29.36■■■□□ 2.29
SSBP4-202ENST00000348495 PTPRJQ12913 1337 aa29.35■■■□□ 2.29
SSBP4-202ENST00000348495 PES1O00541 588 aaKnown RBP29.35■■■□□ 2.29
SSBP4-202ENST00000348495 RECQL4O94761 1208 aa29.35■■■□□ 2.29
SSBP4-202ENST00000348495 FMO5P49326 533 aa29.35■■■□□ 2.29
SSBP4-202ENST00000348495 ALKAL1Q6UXT8 129 aa29.35■■■□□ 2.29
SSBP4-202ENST00000348495 FNBP1Q96RU3 617 aa29.35■■■□□ 2.29
SSBP4-202ENST00000348495 CGRRF1Q99675 332 aa29.35■■■□□ 2.29
SSBP4-202ENST00000348495 ASB7Q9H672 318 aa29.35■■■□□ 2.29
SSBP4-202ENST00000348495 TOPORSQ9NS56 1045 aaPredicted RBP29.35■■■□□ 2.29
SSBP4-202ENST00000348495 LACTBL1A8MY62 500 aa29.34■■■□□ 2.29
SSBP4-202ENST00000348495 C9IYK1 514 aa29.34■■■□□ 2.29
SSBP4-202ENST00000348495 RAG1P15918 1043 aa29.34■■■□□ 2.29
SSBP4-202ENST00000348495 GTF2H1P32780 548 aa29.34■■■□□ 2.29
SSBP4-202ENST00000348495 CBWD6Q4V339 395 aa29.34■■■□□ 2.29
SSBP4-202ENST00000348495 CBWD3Q5JTY5 395 aa29.34■■■□□ 2.29
SSBP4-202ENST00000348495 CBWD5Q5RIA9 395 aa29.34■■■□□ 2.29
SSBP4-202ENST00000348495 FKBP15Q5T1M5 1219 aa29.34■■■□□ 2.29
SSBP4-202ENST00000348495 MFSD5Q6N075 450 aa29.34■■■□□ 2.29
SSBP4-202ENST00000348495 ZNF516Q92618 1163 aa29.34■■■□□ 2.29
SSBP4-202ENST00000348495 SNX27Q96L92 541 aa29.34■■■□□ 2.29
SSBP4-202ENST00000348495 RALGAPA2Q2PPJ7 1873 aa29.34■■■□□ 2.29
SSBP4-202ENST00000348495 CITO14578 2027 aa29.34■■■□□ 2.29
SSBP4-202ENST00000348495 PMM2O15305 246 aa29.34■■■□□ 2.29
SSBP4-202ENST00000348495 STX10O60499 249 aa29.34■■■□□ 2.29
SSBP4-202ENST00000348495 AKAP5P24588 427 aa29.34■■■□□ 2.29
SSBP4-202ENST00000348495 FAM189BP81408 668 aa29.34■■■□□ 2.29
SSBP4-202ENST00000348495 WDR49Q8IV35 697 aa29.34■■■□□ 2.29
SSBP4-202ENST00000348495 ERGIC2Q96RQ1 377 aa29.34■■■□□ 2.29
SSBP4-202ENST00000348495 SKIP12755 728 aa29.33■■■□□ 2.29
SSBP4-202ENST00000348495 ATF7P17544 494 aaPredicted RBP29.33■■■□□ 2.29
SSBP4-202ENST00000348495 GCLMP48507 274 aa29.33■■■□□ 2.29
SSBP4-202ENST00000348495 PTPN21Q16825 1174 aa29.33■■■□□ 2.29
SSBP4-202ENST00000348495 XKR4Q5GH76 650 aa29.33■■■□□ 2.29
SSBP4-202ENST00000348495 C15orf39Q6ZRI6 1047 aa29.33■■■□□ 2.29
SSBP4-202ENST00000348495 SLC24A5Q71RS6 500 aa29.33■■■□□ 2.29
SSBP4-202ENST00000348495 CD302Q8IX05 232 aa29.33■■■□□ 2.29
SSBP4-202ENST00000348495 FAM212AQ96EL1 285 aa29.33■■■□□ 2.29
SSBP4-202ENST00000348495 TMEM117Q9H0C3 514 aa29.33■■■□□ 2.29
SSBP4-202ENST00000348495 A0A1W2PQC6 194 aa29.32■■■□□ 2.28
SSBP4-202ENST00000348495 CDC25BP30305 580 aa29.32■■■□□ 2.28
SSBP4-202ENST00000348495 YARSP54577 528 aaKnown RBP29.32■■■□□ 2.28
SSBP4-202ENST00000348495 DEFB128Q7Z7B8 93 aa29.32■■■□□ 2.28
SSBP4-202ENST00000348495 ZNF598Q86UK7 904 aaKnown RBP29.32■■■□□ 2.28
SSBP4-202ENST00000348495 ECHDC2Q86YB7 292 aa29.32■■■□□ 2.28
SSBP4-202ENST00000348495 EFCAB13Q8IY85 973 aa29.32■■■□□ 2.28
SSBP4-202ENST00000348495 APOL6Q9BWW8 343 aa29.32■■■□□ 2.28
SSBP4-202ENST00000348495 CXCL16Q9H2A7 254 aa29.32■■■□□ 2.28
SSBP4-202ENST00000348495 TMEM8AQ9HCN3 771 aa29.32■■■□□ 2.28
SSBP4-202ENST00000348495 C1orf112Q9NSG2 853 aa29.32■■■□□ 2.28
SSBP4-202ENST00000348495 GTPBP10A4D1E9 387 aaKnown RBP29.31■■■□□ 2.28
SSBP4-202ENST00000348495 P4HA2O15460 535 aa29.31■■■□□ 2.28
SSBP4-202ENST00000348495 TNNI1P19237 187 aa29.31■■■□□ 2.28
SSBP4-202ENST00000348495 VSTM4Q8IW00 320 aa29.31■■■□□ 2.28
SSBP4-202ENST00000348495 HACE1Q8IYU2 909 aa29.31■■■□□ 2.28
SSBP4-202ENST00000348495 FAM84AQ96KN4 292 aa29.31■■■□□ 2.28
SSBP4-202ENST00000348495 MMRN2Q9H8L6 949 aa29.31■■■□□ 2.28
SSBP4-202ENST00000348495 CNTN3Q9P232 1028 aa29.31■■■□□ 2.28
SSBP4-202ENST00000348495 MEIS3P2A8K0S8 358 aa29.31■■■□□ 2.28
SSBP4-202ENST00000348495 ENPP3O14638 875 aa29.31■■■□□ 2.28
SSBP4-202ENST00000348495 N4BP1O75113 896 aaKnown RBP29.31■■■□□ 2.28
SSBP4-202ENST00000348495 AP3M2P53677 418 aa29.31■■■□□ 2.28
SSBP4-202ENST00000348495 LMBRD2Q68DH5 695 aaPredicted RBP29.31■■■□□ 2.28
SSBP4-202ENST00000348495 SV2AQ7L0J3 742 aa29.31■■■□□ 2.28
SSBP4-202ENST00000348495 ARHGAP30Q7Z6I6 1101 aaPredicted RBP29.31■■■□□ 2.28
SSBP4-202ENST00000348495 OR5B17Q8NGF7 314 aa29.31■■■□□ 2.28
SSBP4-202ENST00000348495 ANP32BQ92688 251 aaKnown RBP29.31■■■□□ 2.28
SSBP4-202ENST00000348495 PARP2Q9UGN5 583 aa29.31■■■□□ 2.28
SSBP4-202ENST00000348495 SIK3Q9Y2K2 1263 aa29.31■■■□□ 2.28
SSBP4-202ENST00000348495 CCDC85CA6NKD9 419 aa29.3■■■□□ 2.28
SSBP4-202ENST00000348495 C4BPAP04003 597 aaKnown RBP29.3■■■□□ 2.28
SSBP4-202ENST00000348495 ITGA4P13612 1032 aa29.3■■■□□ 2.28
SSBP4-202ENST00000348495 CSF2RAP15509 400 aa29.3■■■□□ 2.28
SSBP4-202ENST00000348495 MXI1P50539 228 aa29.3■■■□□ 2.28
SSBP4-202ENST00000348495 KCNMA1Q12791 1236 aa29.3■■■□□ 2.28
SSBP4-202ENST00000348495 ZACNQ401N2 412 aa29.3■■■□□ 2.28
SSBP4-202ENST00000348495 KRT39Q6A163 491 aa29.3■■■□□ 2.28
SSBP4-202ENST00000348495 JADE1Q6IE81 842 aa29.3■■■□□ 2.28
SSBP4-202ENST00000348495 AGMOQ6ZNB7 445 aa29.3■■■□□ 2.28
SSBP4-202ENST00000348495 HTATIP2Q9BUP3 242 aa29.3■■■□□ 2.28
SSBP4-202ENST00000348495 C2CD2Q9Y426 696 aa29.3■■■□□ 2.28
SSBP4-202ENST00000348495 NFICP08651 508 aa29.29■■■□□ 2.28
SSBP4-202ENST00000348495 MYL7Q01449 175 aa29.29■■■□□ 2.28
SSBP4-202ENST00000348495 SYCP1Q15431 976 aa29.29■■■□□ 2.28
SSBP4-202ENST00000348495 CNKSR3Q6P9H4 555 aa29.29■■■□□ 2.28
SSBP4-202ENST00000348495 TMEM199Q8N511 208 aa29.29■■■□□ 2.28
SSBP4-202ENST00000348495 LPPQ93052 612 aa29.29■■■□□ 2.28
SSBP4-202ENST00000348495 DERAQ9Y315 318 aa29.29■■■□□ 2.28
SSBP4-202ENST00000348495 COQ4Q9Y3A0 265 aa29.29■■■□□ 2.28
SSBP4-202ENST00000348495 TULP1O00294 542 aaPredicted RBP29.28■■■□□ 2.28
SSBP4-202ENST00000348495 KCNE1P15382 129 aa29.28■■■□□ 2.28
SSBP4-202ENST00000348495 NT5DC4Q86YG4 428 aa29.28■■■□□ 2.28
SSBP4-202ENST00000348495 C7orf61Q8IZ16 206 aa29.28■■■□□ 2.28
SSBP4-202ENST00000348495 PGBD4Q96DM1 585 aa29.28■■■□□ 2.28
SSBP4-202ENST00000348495 PDLIM2Q96JY6 352 aa29.28■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms