RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 KCND2Q9NZV8 630 aa6.49□□□□□ -1.37
CLCN3-201ENST00000347613 LARSQ9P2J5 1176 aaKnown RBP6.49□□□□□ -1.37
CLCN3-201ENST00000347613 TJP2Q9UDY2 1190 aa6.49□□□□□ -1.37
CLCN3-201ENST00000347613 COQ4Q9Y3A0 265 aa6.49□□□□□ -1.37
CLCN3-201ENST00000347613 DAAM1Q9Y4D1 1078 aa6.49□□□□□ -1.37
CLCN3-201ENST00000347613 CCDC188H7C350 402 aa6.48□□□□□ -1.37
CLCN3-201ENST00000347613 GJB1P08034 283 aa6.48□□□□□ -1.37
CLCN3-201ENST00000347613 ASNSP08243 561 aa6.48□□□□□ -1.37
CLCN3-201ENST00000347613 ACO1P21399 889 aaKnown RBP6.48□□□□□ -1.37
CLCN3-201ENST00000347613 TNFSF9P41273 254 aa6.48□□□□□ -1.37
CLCN3-201ENST00000347613 HMGCS2P54868 508 aa6.48□□□□□ -1.37
CLCN3-201ENST00000347613 HADHBP55084 474 aaKnown RBP6.48□□□□□ -1.37
CLCN3-201ENST00000347613 CYP24A1Q07973 514 aa6.48□□□□□ -1.37
CLCN3-201ENST00000347613 SLC20A2Q08357 652 aa6.48□□□□□ -1.37
CLCN3-201ENST00000347613 ADCY1Q08828 1119 aa6.48□□□□□ -1.37
CLCN3-201ENST00000347613 LONRF1Q17RB8 773 aa6.48□□□□□ -1.37
CLCN3-201ENST00000347613 KRT71Q3SY84 523 aa6.48□□□□□ -1.37
CLCN3-201ENST00000347613 MCTP2Q6DN12 878 aa6.48□□□□□ -1.37
CLCN3-201ENST00000347613 RNF207Q6ZRF8 634 aa6.48□□□□□ -1.37
CLCN3-201ENST00000347613 OTUD6AQ7L8S5 288 aa6.48□□□□□ -1.37
CLCN3-201ENST00000347613 FAM83AQ86UY5 434 aa6.48□□□□□ -1.37
CLCN3-201ENST00000347613 FAM228AQ86W67 206 aa6.48□□□□□ -1.37
CLCN3-201ENST00000347613 C12orf56Q8IXR9 622 aa6.48□□□□□ -1.37
CLCN3-201ENST00000347613 ASAP3Q8TDY4 903 aa6.48□□□□□ -1.37
CLCN3-201ENST00000347613 ZNF317Q96PQ6 595 aaPredicted RBP6.48□□□□□ -1.37
CLCN3-201ENST00000347613 HACL1Q9UJ83 578 aa6.48□□□□□ -1.37
CLCN3-201ENST00000347613 SYNPO2Q9UMS6 1093 aa6.48□□□□□ -1.37
CLCN3-201ENST00000347613 UBE4BO95155 1302 aa6.48□□□□□ -1.37
CLCN3-201ENST00000347613 SSC5DA1L4H1 1573 aa6.48□□□□□ -1.37
CLCN3-201ENST00000347613 HMGB1P1B2RPK0 211 aaPredicted RBP6.48□□□□□ -1.37
CLCN3-201ENST00000347613 EBAG9O00559 213 aa6.48□□□□□ -1.37
CLCN3-201ENST00000347613 LYPLA2O95372 231 aa6.48□□□□□ -1.37
CLCN3-201ENST00000347613 NR3C2P08235 984 aa6.48□□□□□ -1.37
CLCN3-201ENST00000347613 ZSCAN5DPP0CG00 497 aa6.48□□□□□ -1.37
CLCN3-201ENST00000347613 CHN1P15882 459 aa6.48□□□□□ -1.37
CLCN3-201ENST00000347613 DRD4P21917 467 aa6.48□□□□□ -1.37
CLCN3-201ENST00000347613 COILP38432 576 aaPredicted RBP6.48□□□□□ -1.37
CLCN3-201ENST00000347613 GPC3P51654 580 aa6.48□□□□□ -1.37
CLCN3-201ENST00000347613 PMS2P54278 862 aa6.48□□□□□ -1.37
CLCN3-201ENST00000347613 NRLP54845 237 aa6.48□□□□□ -1.37
CLCN3-201ENST00000347613 RPL7AP62424 266 aaKnown RBP6.48□□□□□ -1.37
CLCN3-201ENST00000347613 PPP2R2AP63151 447 aa6.48□□□□□ -1.37
CLCN3-201ENST00000347613 GAD2Q05329 585 aa6.48□□□□□ -1.37
CLCN3-201ENST00000347613 ZNF252P-AS1Q0IIN9 211 aa6.48□□□□□ -1.37
CLCN3-201ENST00000347613 LRRC14Q15048 493 aa6.48□□□□□ -1.37
CLCN3-201ENST00000347613 HP1BP3Q5SSJ5 553 aaPredicted RBP6.48□□□□□ -1.37
CLCN3-201ENST00000347613 LRIG3Q6UXM1 1119 aa6.48□□□□□ -1.37
CLCN3-201ENST00000347613 SLC13A5Q86YT5 568 aaPredicted RBP6.48□□□□□ -1.37
CLCN3-201ENST00000347613 SYCE1Q8N0S2 351 aa6.48□□□□□ -1.37
CLCN3-201ENST00000347613 MTMR14Q8NCE2 650 aa6.48□□□□□ -1.37
CLCN3-201ENST00000347613 SPIRE2Q8WWL2 714 aa6.48□□□□□ -1.37
CLCN3-201ENST00000347613 ZNF653Q96CK0 615 aa6.48□□□□□ -1.37
CLCN3-201ENST00000347613 CEP170P1Q96L14 293 aa6.48□□□□□ -1.37
CLCN3-201ENST00000347613 PCYT2Q99447 389 aa6.48□□□□□ -1.37
CLCN3-201ENST00000347613 KIAA1683Q9H0B3 1180 aa6.48□□□□□ -1.37
CLCN3-201ENST00000347613 UTP11Q9Y3A2 253 aaKnown RBP6.48□□□□□ -1.37
CLCN3-201ENST00000347613 NEU2Q9Y3R4 380 aa6.48□□□□□ -1.37
CLCN3-201ENST00000347613 ATP8B3O60423 1300 aa6.48□□□□□ -1.37
CLCN3-201ENST00000347613 PHF2O75151 1096 aa6.48□□□□□ -1.37
CLCN3-201ENST00000347613 FAM107AO95990 144 aa6.48□□□□□ -1.37
CLCN3-201ENST00000347613 HNRNPH1P31943 449 aaKnown RBP6.48□□□□□ -1.37
CLCN3-201ENST00000347613 VPS41P49754 854 aa6.48□□□□□ -1.37
CLCN3-201ENST00000347613 HIRAP54198 1017 aaPredicted RBP6.48□□□□□ -1.37
CLCN3-201ENST00000347613 PSMC5P62195 406 aa6.48□□□□□ -1.37
CLCN3-201ENST00000347613 CDR2Q01850 454 aa6.48□□□□□ -1.37
CLCN3-201ENST00000347613 OGDHQ02218 1023 aa6.48□□□□□ -1.37
CLCN3-201ENST00000347613 RAB6CQ53S08 254 aa6.48□□□□□ -1.37
CLCN3-201ENST00000347613 TNFAIP8L3Q5GJ75 292 aa6.48□□□□□ -1.37
CLCN3-201ENST00000347613 ARHGEF16Q5VV41 709 aa6.48□□□□□ -1.37
CLCN3-201ENST00000347613 C11orf63Q6NUN7 778 aa6.48□□□□□ -1.37
CLCN3-201ENST00000347613 VPS36Q86VN1 386 aa6.48□□□□□ -1.37
CLCN3-201ENST00000347613 CDR2LQ86X02 465 aaPredicted RBP6.48□□□□□ -1.37
CLCN3-201ENST00000347613 NME8Q8N427 588 aa6.48□□□□□ -1.37
CLCN3-201ENST00000347613 FLAD1Q8NFF5 587 aa6.48□□□□□ -1.37
CLCN3-201ENST00000347613 MOV10L1Q9BXT6 1211 aaKnown RBP6.48□□□□□ -1.37
CLCN3-201ENST00000347613 RAB6CQ9H0N0 254 aa6.48□□□□□ -1.37
CLCN3-201ENST00000347613 ST6GALNAC4Q9H4F1 302 aa6.48□□□□□ -1.37
CLCN3-201ENST00000347613 TMOD2Q9NZR1 351 aa6.48□□□□□ -1.37
CLCN3-201ENST00000347613 PCYOX1Q9UHG3 505 aa6.48□□□□□ -1.37
CLCN3-201ENST00000347613 BRCA1P38398 1863 aaKnown RBP6.47□□□□□ -1.37
CLCN3-201ENST00000347613 SIP14410 1827 aa6.47□□□□□ -1.37
CLCN3-201ENST00000347613 MEFVO15553 781 aaPredicted RBP6.47□□□□□ -1.37
CLCN3-201ENST00000347613 RIPK2O43353 540 aa6.47□□□□□ -1.37
CLCN3-201ENST00000347613 ATP2C2O75185 946 aa6.47□□□□□ -1.37
CLCN3-201ENST00000347613 BANF1O75531 89 aa6.47□□□□□ -1.37
CLCN3-201ENST00000347613 ZBTB7AO95365 584 aa6.47□□□□□ -1.37
CLCN3-201ENST00000347613 CPP00450 1065 aa6.47□□□□□ -1.37
CLCN3-201ENST00000347613 C4BPAP04003 597 aaKnown RBP6.47□□□□□ -1.37
CLCN3-201ENST00000347613 MUTP22033 750 aa6.47□□□□□ -1.37
CLCN3-201ENST00000347613 PTP4A2Q12974 167 aa6.47□□□□□ -1.37
CLCN3-201ENST00000347613 MTM1Q13496 603 aa6.47□□□□□ -1.37
CLCN3-201ENST00000347613 AUHQ13825 339 aaKnown RBP6.47□□□□□ -1.37
CLCN3-201ENST00000347613 TCEAL1Q15170 157 aa6.47□□□□□ -1.37
CLCN3-201ENST00000347613 SNRNP48Q6IEG0 339 aaKnown RBP6.47□□□□□ -1.37
CLCN3-201ENST00000347613 RHBDF2Q6PJF5 856 aa6.47□□□□□ -1.37
CLCN3-201ENST00000347613 B4GALNT4Q76KP1 1039 aa6.47□□□□□ -1.37
CLCN3-201ENST00000347613 EXOC3L1Q86VI1 746 aa6.47□□□□□ -1.37
CLCN3-201ENST00000347613 C1orf131Q8NDD1 294 aaKnown RBP6.47□□□□□ -1.37
CLCN3-201ENST00000347613 LMBR1Q8WVP7 490 aa6.47□□□□□ -1.37
CLCN3-201ENST00000347613 ART4Q93070 314 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms