RNA–Protein interactions for RNA: ENST00000347519.10

CHMP4A-201, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best) BASIC

Gene CHMP4A, Length 1,393 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-201ENST00000347519 A0A1B0GTH6 734 aa20.63■□□□□ 0.89
CHMP4A-201ENST00000347519 ENPP3O14638 875 aa20.63■□□□□ 0.89
CHMP4A-201ENST00000347519 RECQL4O94761 1208 aa20.63■□□□□ 0.89
CHMP4A-201ENST00000347519 KRT13P13646 458 aa20.63■□□□□ 0.89
CHMP4A-201ENST00000347519 SYN1P17600 705 aa20.63■□□□□ 0.89
CHMP4A-201ENST00000347519 RFC2P35250 354 aa20.63■□□□□ 0.89
CHMP4A-201ENST00000347519 PPP3CAQ08209 521 aa20.63■□□□□ 0.89
CHMP4A-201ENST00000347519 TCERG1LQ5VWI1 586 aa20.63■□□□□ 0.89
CHMP4A-201ENST00000347519 ECHDC2Q86YB7 292 aa20.63■□□□□ 0.89
CHMP4A-201ENST00000347519 TMC2Q8TDI7 906 aa20.63■□□□□ 0.89
CHMP4A-201ENST00000347519 ZNF516Q92618 1163 aa20.63■□□□□ 0.89
CHMP4A-201ENST00000347519 CCDC94Q9BW85 323 aaPredicted RBP20.63■□□□□ 0.89
CHMP4A-201ENST00000347519 TSPYL2Q9H2G4 693 aaPredicted RBP20.63■□□□□ 0.89
CHMP4A-201ENST00000347519 RTN4Q9NQC3 1192 aaKnown RBP20.63■□□□□ 0.89
CHMP4A-201ENST00000347519 KLK14Q9P0G3 267 aa20.63■□□□□ 0.89
CHMP4A-201ENST00000347519 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.63■□□□□ 0.89
CHMP4A-201ENST00000347519 A0A0U1RQF3 1178 aa20.62■□□□□ 0.89
CHMP4A-201ENST00000347519 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.62■□□□□ 0.89
CHMP4A-201ENST00000347519 TTC26A0AVF1 554 aa20.62■□□□□ 0.89
CHMP4A-201ENST00000347519 ZNF623O75123 536 aa20.62■□□□□ 0.89
CHMP4A-201ENST00000347519 ACRP10323 421 aa20.62■□□□□ 0.89
CHMP4A-201ENST00000347519 DLATP10515 647 aaKnown RBP20.62■□□□□ 0.89
CHMP4A-201ENST00000347519 UBASH3AP57075 661 aa20.62■□□□□ 0.89
CHMP4A-201ENST00000347519 FAM189BP81408 668 aa20.62■□□□□ 0.89
CHMP4A-201ENST00000347519 KCNH2Q12809 1159 aa20.62■□□□□ 0.89
CHMP4A-201ENST00000347519 NR1I3Q14994 352 aa20.62■□□□□ 0.89
CHMP4A-201ENST00000347519 KYAT1Q16773 422 aa20.62■□□□□ 0.89
CHMP4A-201ENST00000347519 SCARA3Q6AZY7 606 aa20.62■□□□□ 0.89
CHMP4A-201ENST00000347519 AGMOQ6ZNB7 445 aa20.62■□□□□ 0.89
CHMP4A-201ENST00000347519 ZNF598Q86UK7 904 aaKnown RBP20.62■□□□□ 0.89
CHMP4A-201ENST00000347519 EFCAB13Q8IY85 973 aa20.62■□□□□ 0.89
CHMP4A-201ENST00000347519 APBB2Q92870 758 aa20.62■□□□□ 0.89
CHMP4A-201ENST00000347519 BADQ92934 168 aa20.62■□□□□ 0.89
CHMP4A-201ENST00000347519 SNX27Q96L92 541 aa20.62■□□□□ 0.89
CHMP4A-201ENST00000347519 HTATIP2Q9BUP3 242 aa20.62■□□□□ 0.89
CHMP4A-201ENST00000347519 FTHL17Q9BXU8 183 aa20.62■□□□□ 0.89
CHMP4A-201ENST00000347519 MMRN2Q9H8L6 949 aa20.62■□□□□ 0.89
CHMP4A-201ENST00000347519 PARP2Q9UGN5 583 aa20.62■□□□□ 0.89
CHMP4A-201ENST00000347519 ZMYND8Q9ULU4 1186 aaPredicted RBP20.62■□□□□ 0.89
CHMP4A-201ENST00000347519 LGALS16A8MUM7 142 aa20.61■□□□□ 0.89
CHMP4A-201ENST00000347519 ZNF75DP51815 510 aa20.61■□□□□ 0.89
CHMP4A-201ENST00000347519 CBWD6Q4V339 395 aa20.61■□□□□ 0.89
CHMP4A-201ENST00000347519 CBWD3Q5JTY5 395 aa20.61■□□□□ 0.89
CHMP4A-201ENST00000347519 CBWD5Q5RIA9 395 aa20.61■□□□□ 0.89
CHMP4A-201ENST00000347519 CNKSR3Q6P9H4 555 aa20.61■□□□□ 0.89
CHMP4A-201ENST00000347519 ALKAL1Q6UXT8 129 aa20.61■□□□□ 0.89
CHMP4A-201ENST00000347519 TMEM199Q8N511 208 aa20.61■□□□□ 0.89
CHMP4A-201ENST00000347519 ANKRD20A12PQ8NF67 263 aa20.61■□□□□ 0.89
CHMP4A-201ENST00000347519 OR5B17Q8NGF7 314 aa20.61■□□□□ 0.89
CHMP4A-201ENST00000347519 ZMAT2Q96NC0 199 aaKnown RBP20.61■□□□□ 0.89
CHMP4A-201ENST00000347519 CGRRF1Q99675 332 aa20.61■□□□□ 0.89
CHMP4A-201ENST00000347519 NDST4Q9H3R1 872 aa20.61■□□□□ 0.89
CHMP4A-201ENST00000347519 EVI5O60447 810 aa20.6■□□□□ 0.89
CHMP4A-201ENST00000347519 AFPP02771 609 aaKnown RBP20.6■□□□□ 0.89
CHMP4A-201ENST00000347519 NFICP08651 508 aa20.6■□□□□ 0.89
CHMP4A-201ENST00000347519 ITGA4P13612 1032 aa20.6■□□□□ 0.89
CHMP4A-201ENST00000347519 GCLMP48507 274 aa20.6■□□□□ 0.89
CHMP4A-201ENST00000347519 AFF1P51825 1210 aaKnown RBP20.6■□□□□ 0.89
CHMP4A-201ENST00000347519 EPHB4P54760 987 aa20.6■□□□□ 0.89
CHMP4A-201ENST00000347519 CLDN10P78369 228 aa20.6■□□□□ 0.89
CHMP4A-201ENST00000347519 SLC24A5Q71RS6 500 aa20.6■□□□□ 0.89
CHMP4A-201ENST00000347519 C16orf59Q7L2K0 433 aa20.6■□□□□ 0.89
CHMP4A-201ENST00000347519 RNF169Q8NCN4 708 aa20.6■□□□□ 0.89
CHMP4A-201ENST00000347519 TRIM5Q9C035 493 aa20.6■□□□□ 0.89
CHMP4A-201ENST00000347519 TTC3P53804 2025 aa20.6■□□□□ 0.89
CHMP4A-201ENST00000347519 PES1O00541 588 aaKnown RBP20.59■□□□□ 0.89
CHMP4A-201ENST00000347519 FMO5P49326 533 aa20.59■□□□□ 0.89
CHMP4A-201ENST00000347519 RAB27AP51159 221 aa20.59■□□□□ 0.89
CHMP4A-201ENST00000347519 POU5F1Q01860 360 aaKnown RBP20.59■□□□□ 0.89
CHMP4A-201ENST00000347519 ENPEPQ07075 957 aa20.59■□□□□ 0.89
CHMP4A-201ENST00000347519 HSP90AA2PQ14568 343 aaPredicted RBP20.59■□□□□ 0.89
CHMP4A-201ENST00000347519 XKR4Q5GH76 650 aa20.59■□□□□ 0.89
CHMP4A-201ENST00000347519 JADE1Q6IE81 842 aa20.59■□□□□ 0.89
CHMP4A-201ENST00000347519 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.59■□□□□ 0.89
CHMP4A-201ENST00000347519 DPF3Q92784 378 aa20.59■□□□□ 0.89
CHMP4A-201ENST00000347519 FNBP1Q96RU3 617 aa20.59■□□□□ 0.89
CHMP4A-201ENST00000347519 TMEM117Q9H0C3 514 aa20.59■□□□□ 0.89
CHMP4A-201ENST00000347519 C1orf112Q9NSG2 853 aa20.59■□□□□ 0.89
CHMP4A-201ENST00000347519 MIOSQ9NXC5 875 aa20.59■□□□□ 0.89
CHMP4A-201ENST00000347519 PRKAG2Q9UGJ0 569 aa20.59■□□□□ 0.89
CHMP4A-201ENST00000347519 PTPRSQ13332 1948 aa20.59■□□□□ 0.89
CHMP4A-201ENST00000347519 LRRN2O75325 713 aa20.59■□□□□ 0.89
CHMP4A-201ENST00000347519 IL18RAPO95256 599 aa20.59■□□□□ 0.89
CHMP4A-201ENST00000347519 ADCY5O95622 1261 aa20.59■□□□□ 0.89
CHMP4A-201ENST00000347519 PPP2R3AQ06190 1150 aa20.59■□□□□ 0.89
CHMP4A-201ENST00000347519 GLRA4Q5JXX5 417 aa20.59■□□□□ 0.89
CHMP4A-201ENST00000347519 GSTCDQ8NEC7 633 aa20.59■□□□□ 0.89
CHMP4A-201ENST00000347519 ZFP42Q96MM3 310 aa20.59■□□□□ 0.89
CHMP4A-201ENST00000347519 IL23AQ9NPF7 189 aa20.59■□□□□ 0.89
CHMP4A-201ENST00000347519 PTGESO14684 152 aa20.58■□□□□ 0.88
CHMP4A-201ENST00000347519 C4BPAP04003 597 aaKnown RBP20.58■□□□□ 0.88
CHMP4A-201ENST00000347519 TNNI1P19237 187 aa20.58■□□□□ 0.88
CHMP4A-201ENST00000347519 KLK7P49862 253 aa20.58■□□□□ 0.88
CHMP4A-201ENST00000347519 GUCY2FP51841 1108 aa20.58■□□□□ 0.88
CHMP4A-201ENST00000347519 YARSP54577 528 aaKnown RBP20.58■□□□□ 0.88
CHMP4A-201ENST00000347519 UBXN1Q04323 297 aa20.58■□□□□ 0.88
CHMP4A-201ENST00000347519 KCNMA1Q12791 1236 aa20.58■□□□□ 0.88
CHMP4A-201ENST00000347519 SURF1Q15526 300 aa20.58■□□□□ 0.88
CHMP4A-201ENST00000347519 FILIP1LQ4L180 1135 aa20.58■□□□□ 0.88
CHMP4A-201ENST00000347519 C15orf39Q6ZRI6 1047 aa20.58■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms