RNA–Protein interactions for RNA: ENST00000345865.6

UPF3B-202, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF3B, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-202ENST00000345865 DLK2Q6UY11 383 aa16.57■□□□□ 0.24
UPF3B-202ENST00000345865 ASAP3Q8TDY4 903 aa16.57■□□□□ 0.24
UPF3B-202ENST00000345865 CDHR1Q96JP9 859 aa16.57■□□□□ 0.24
UPF3B-202ENST00000345865 IFT74Q96LB3 600 aa16.57■□□□□ 0.24
UPF3B-202ENST00000345865 FMO2Q99518 471 aa16.57■□□□□ 0.24
UPF3B-202ENST00000345865 TRIM7Q9C029 511 aa16.57■□□□□ 0.24
UPF3B-202ENST00000345865 RAB17Q9H0T7 212 aa16.57■□□□□ 0.24
UPF3B-202ENST00000345865 WNT8AQ9H1J5 351 aa16.57■□□□□ 0.24
UPF3B-202ENST00000345865 EPB41L4BQ9H329 900 aa16.57■□□□□ 0.24
UPF3B-202ENST00000345865 CLDN10P78369 228 aa16.57■□□□□ 0.24
UPF3B-202ENST00000345865 GCNT1Q02742 428 aa16.57■□□□□ 0.24
UPF3B-202ENST00000345865 LLGL1Q15334 1064 aa16.57■□□□□ 0.24
UPF3B-202ENST00000345865 SIX1Q15475 284 aaPredicted RBP16.57■□□□□ 0.24
UPF3B-202ENST00000345865 CLEC16AQ2KHT3 1053 aa16.57■□□□□ 0.24
UPF3B-202ENST00000345865 ZBTB41Q5SVQ8 909 aa16.57■□□□□ 0.24
UPF3B-202ENST00000345865 SPOPLQ6IQ16 392 aa16.57■□□□□ 0.24
UPF3B-202ENST00000345865 MIS18BP1Q6P0N0 1132 aa16.57■□□□□ 0.24
UPF3B-202ENST00000345865 LLGL2Q6P1M3 1020 aa16.57■□□□□ 0.24
UPF3B-202ENST00000345865 GGA3Q9NZ52 723 aa16.57■□□□□ 0.24
UPF3B-202ENST00000345865 ATP8A1Q9Y2Q0 1164 aa16.57■□□□□ 0.24
UPF3B-202ENST00000345865 PCDHA3Q9Y5H8 950 aa16.57■□□□□ 0.24
UPF3B-202ENST00000345865 MAFBQ9Y5Q3 323 aaPredicted RBP16.57■□□□□ 0.24
UPF3B-202ENST00000345865 FAM187AA6NFU0 413 aa16.56■□□□□ 0.24
UPF3B-202ENST00000345865 EXTL3O43909 919 aa16.56■□□□□ 0.24
UPF3B-202ENST00000345865 ZEB2O60315 1214 aa16.56■□□□□ 0.24
UPF3B-202ENST00000345865 PPFIA2O75334 1257 aa16.56■□□□□ 0.24
UPF3B-202ENST00000345865 MYZAPP0CAP1 466 aa16.56■□□□□ 0.24
UPF3B-202ENST00000345865 UNGP13051 313 aaPredicted RBP16.56■□□□□ 0.24
UPF3B-202ENST00000345865 LIG4P49917 911 aa16.56■□□□□ 0.24
UPF3B-202ENST00000345865 HIRAP54198 1017 aaPredicted RBP16.56■□□□□ 0.24
UPF3B-202ENST00000345865 DHX34Q14147 1143 aaKnown RBP16.56■□□□□ 0.24
UPF3B-202ENST00000345865 PPP2R5EQ16537 467 aa16.56■□□□□ 0.24
UPF3B-202ENST00000345865 GNPTABQ3T906 1256 aa16.56■□□□□ 0.24
UPF3B-202ENST00000345865 TDRD10Q5VZ19 366 aaKnown RBP16.56■□□□□ 0.24
UPF3B-202ENST00000345865 SCARA3Q6AZY7 606 aa16.56■□□□□ 0.24
UPF3B-202ENST00000345865 FBXO25Q8TCJ0 367 aa16.56■□□□□ 0.24
UPF3B-202ENST00000345865 PSPC1Q8WXF1 523 aaKnown RBP16.56■□□□□ 0.24
UPF3B-202ENST00000345865 MAGOHBQ96A72 148 aaKnown RBP16.56■□□□□ 0.24
UPF3B-202ENST00000345865 CEP89Q96ST8 783 aa16.56■□□□□ 0.24
UPF3B-202ENST00000345865 GRHL1Q9NZI5 618 aa16.56■□□□□ 0.24
UPF3B-202ENST00000345865 CNOT8Q9UFF9 292 aaKnown RBP16.56■□□□□ 0.24
UPF3B-202ENST00000345865 LTBP3Q9NS15 1303 aa16.56■□□□□ 0.24
UPF3B-202ENST00000345865 LOC285556D6RIA3 1793 aa16.56■□□□□ 0.24
UPF3B-202ENST00000345865 DCDC2CA8MYV0 355 aa16.56■□□□□ 0.24
UPF3B-202ENST00000345865 SPOPO43791 374 aa16.56■□□□□ 0.24
UPF3B-202ENST00000345865 ATG7O95352 703 aa16.56■□□□□ 0.24
UPF3B-202ENST00000345865 C4BPAP04003 597 aaKnown RBP16.56■□□□□ 0.24
UPF3B-202ENST00000345865 GLRA2P23416 452 aa16.56■□□□□ 0.24
UPF3B-202ENST00000345865 HPDP32754 393 aaPredicted RBP16.56■□□□□ 0.24
UPF3B-202ENST00000345865 LSP1P33241 339 aa16.56■□□□□ 0.24
UPF3B-202ENST00000345865 RPL21P46778 160 aaKnown RBP16.56■□□□□ 0.24
UPF3B-202ENST00000345865 POLGP54098 1239 aaPredicted RBP16.56■□□□□ 0.24
UPF3B-202ENST00000345865 PLTPP55058 493 aa16.56■□□□□ 0.24
UPF3B-202ENST00000345865 ZACNQ401N2 412 aa16.56■□□□□ 0.24
UPF3B-202ENST00000345865 C2CD6Q53TS8 623 aa16.56■□□□□ 0.24
UPF3B-202ENST00000345865 PHLDB2Q86SQ0 1253 aa16.56■□□□□ 0.24
UPF3B-202ENST00000345865 USP37Q86T82 979 aa16.56■□□□□ 0.24
UPF3B-202ENST00000345865 APOBEC3FQ8IUX4 373 aaKnown RBP16.56■□□□□ 0.24
UPF3B-202ENST00000345865 DHX33Q9H6R0 707 aaKnown RBP16.56■□□□□ 0.24
UPF3B-202ENST00000345865 UVRAGQ9P2Y5 699 aa16.56■□□□□ 0.24
UPF3B-202ENST00000345865 PCYOX1Q9UHG3 505 aa16.56■□□□□ 0.24
UPF3B-202ENST00000345865 FEZ2Q9UHY8 353 aaPredicted RBP16.56■□□□□ 0.24
UPF3B-202ENST00000345865 STYXL1Q9Y6J8 313 aa16.56■□□□□ 0.24
UPF3B-202ENST00000345865 MYPNQ86TC9 1320 aa16.55■□□□□ 0.24
UPF3B-202ENST00000345865 STAM2O75886 525 aa16.55■□□□□ 0.24
UPF3B-202ENST00000345865 VNN1O95497 513 aa16.55■□□□□ 0.24
UPF3B-202ENST00000345865 RARAP10276 462 aa16.55■□□□□ 0.24
UPF3B-202ENST00000345865 CHRNA3P32297 505 aa16.55■□□□□ 0.24
UPF3B-202ENST00000345865 MTMR3Q13615 1198 aa16.55■□□□□ 0.24
UPF3B-202ENST00000345865 PSMD6Q15008 389 aa16.55■□□□□ 0.24
UPF3B-202ENST00000345865 UBAP2Q5T6F2 1119 aaKnown RBP16.55■□□□□ 0.24
UPF3B-202ENST00000345865 SEL1L2Q5TEA6 688 aa16.55■□□□□ 0.24
UPF3B-202ENST00000345865 SLC13A5Q86YT5 568 aaPredicted RBP16.55■□□□□ 0.24
UPF3B-202ENST00000345865 C10orf67Q8IYJ2 551 aa16.55■□□□□ 0.24
UPF3B-202ENST00000345865 MORC4Q8TE76 937 aa16.55■□□□□ 0.24
UPF3B-202ENST00000345865 CPA5Q8WXQ8 436 aa16.55■□□□□ 0.24
UPF3B-202ENST00000345865 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.55■□□□□ 0.24
UPF3B-202ENST00000345865 HOXC10Q9NYD6 342 aa16.55■□□□□ 0.24
UPF3B-202ENST00000345865 AGO2Q9UKV8 859 aaKnown RBP16.55■□□□□ 0.24
UPF3B-202ENST00000345865 WDR90Q96KV7 1748 aa16.55■□□□□ 0.24
UPF3B-202ENST00000345865 HLA-DRAP01903 254 aa16.54■□□□□ 0.24
UPF3B-202ENST00000345865 CFHP08603 1231 aa16.54■□□□□ 0.24
UPF3B-202ENST00000345865 TNNI1P19237 187 aa16.54■□□□□ 0.24
UPF3B-202ENST00000345865 KCNJ1P48048 391 aa16.54■□□□□ 0.24
UPF3B-202ENST00000345865 DRG2P55039 364 aaKnown RBP16.54■□□□□ 0.24
UPF3B-202ENST00000345865 STXBP2Q15833 593 aa16.54■□□□□ 0.24
UPF3B-202ENST00000345865 CLUL1Q15846 466 aa16.54■□□□□ 0.24
UPF3B-202ENST00000345865 TREML2Q5T2D2 321 aa16.54■□□□□ 0.24
UPF3B-202ENST00000345865 CCDC137Q6PK04 289 aaKnown RBP16.54■□□□□ 0.24
UPF3B-202ENST00000345865 SEPT14Q6ZU15 432 aa16.54■□□□□ 0.24
UPF3B-202ENST00000345865 PORCNQ9H237 461 aa16.54■□□□□ 0.24
UPF3B-202ENST00000345865 ZNF302Q9NR11 478 aa16.54■□□□□ 0.24
UPF3B-202ENST00000345865 GOLGA6L10A6NI86 522 aa16.54■□□□□ 0.24
UPF3B-202ENST00000345865 ZC3H11AO75152 810 aaKnown RBP eCLIP16.54■□□□□ 0.24
UPF3B-202ENST00000345865 OATP04181 439 aa16.54■□□□□ 0.24
UPF3B-202ENST00000345865 HSPA6P17066 643 aa16.54■□□□□ 0.24
UPF3B-202ENST00000345865 MDH1P40925 334 aaKnown RBP16.54■□□□□ 0.24
UPF3B-202ENST00000345865 ENPEPQ07075 957 aa16.54■□□□□ 0.24
UPF3B-202ENST00000345865 CYP1B1Q16678 543 aa16.54■□□□□ 0.24
UPF3B-202ENST00000345865 PCYT2Q99447 389 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms