RNA–Protein interactions for RNA: ENST00000345356.10

COL12A1-202, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL12A1, Length 5,886 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-202ENST00000345356 ATP1A4Q13733 1029 aa12.76□□□□□ -0.37
COL12A1-202ENST00000345356 ZNF394Q53GI3 561 aa12.76□□□□□ -0.37
COL12A1-202ENST00000345356 LRRC8BQ6P9F7 803 aa12.76□□□□□ -0.37
COL12A1-202ENST00000345356 SEPT8Q92599 483 aa12.76□□□□□ -0.37
COL12A1-202ENST00000345356 CCSER1Q9C0I3 900 aa12.76□□□□□ -0.37
COL12A1-202ENST00000345356 CPDO75976 1380 aa12.76□□□□□ -0.37
COL12A1-202ENST00000345356 MAP3K15Q6ZN16 1313 aa12.76□□□□□ -0.37
COL12A1-202ENST00000345356 GOLGA8CPA6NN73 597 aa12.76□□□□□ -0.37
COL12A1-202ENST00000345356 F5H423 210 aaPredicted RBP12.76□□□□□ -0.37
COL12A1-202ENST00000345356 GYS1P13807 737 aa12.76□□□□□ -0.37
COL12A1-202ENST00000345356 PSMC3P17980 439 aa12.76□□□□□ -0.37
COL12A1-202ENST00000345356 COILP38432 576 aaPredicted RBP12.76□□□□□ -0.37
COL12A1-202ENST00000345356 PPIDQ08752 370 aaKnown RBP12.76□□□□□ -0.37
COL12A1-202ENST00000345356 PLEKHA7Q6IQ23 1121 aa12.76□□□□□ -0.37
COL12A1-202ENST00000345356 TMEM270Q6UE05 265 aa12.76□□□□□ -0.37
COL12A1-202ENST00000345356 CRELD2Q6UXH1 353 aaPredicted RBP12.76□□□□□ -0.37
COL12A1-202ENST00000345356 TSEN2Q8NCE0 465 aaKnown RBP12.76□□□□□ -0.37
COL12A1-202ENST00000345356 SKA2Q8WVK7 121 aaPredicted RBP12.76□□□□□ -0.37
COL12A1-202ENST00000345356 DHX38Q92620 1227 aaKnown RBP12.76□□□□□ -0.37
COL12A1-202ENST00000345356 TMEM237Q96Q45 408 aa12.76□□□□□ -0.37
COL12A1-202ENST00000345356 GCOM2Q9BZD3 368 aaPredicted RBP12.76□□□□□ -0.37
COL12A1-202ENST00000345356 PCMTD2Q9NV79 361 aa12.76□□□□□ -0.37
COL12A1-202ENST00000345356 KLHL11Q9NVR0 708 aa12.76□□□□□ -0.37
COL12A1-202ENST00000345356 BLOC1S6Q9UL45 172 aa12.76□□□□□ -0.37
COL12A1-202ENST00000345356 ZNF609O15014 1411 aa12.76□□□□□ -0.37
COL12A1-202ENST00000345356 PNMA6FA0A0J9YX94 578 aa12.76□□□□□ -0.37
COL12A1-202ENST00000345356 ZNF233A6NK53 670 aa12.76□□□□□ -0.37
COL12A1-202ENST00000345356 NMT2O60551 498 aa12.76□□□□□ -0.37
COL12A1-202ENST00000345356 TBCCQ15814 346 aa12.76□□□□□ -0.37
COL12A1-202ENST00000345356 PPP2R3CQ969Q6 453 aa12.76□□□□□ -0.37
COL12A1-202ENST00000345356 E2F7Q96AV8 911 aa12.76□□□□□ -0.37
COL12A1-202ENST00000345356 CPVLQ9H3G5 476 aa12.76□□□□□ -0.37
COL12A1-202ENST00000345356 SLC9A2Q9UBY0 812 aa12.76□□□□□ -0.37
COL12A1-202ENST00000345356 TEKT2Q9UIF3 430 aa12.76□□□□□ -0.37
COL12A1-202ENST00000345356 CORO1CQ9ULV4 474 aaPredicted RBP12.76□□□□□ -0.37
COL12A1-202ENST00000345356 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.76□□□□□ -0.37
COL12A1-202ENST00000345356 F8VZ95 297 aa12.76□□□□□ -0.37
COL12A1-202ENST00000345356 WDR47O94967 919 aa12.76□□□□□ -0.37
COL12A1-202ENST00000345356 ZNF18P17022 549 aa12.76□□□□□ -0.37
COL12A1-202ENST00000345356 ZNF200P98182 395 aaPredicted RBP12.76□□□□□ -0.37
COL12A1-202ENST00000345356 POU5F1BQ06416 359 aa12.76□□□□□ -0.37
COL12A1-202ENST00000345356 ZNF844Q08AG5 666 aa12.76□□□□□ -0.37
COL12A1-202ENST00000345356 TBL3Q12788 808 aaKnown RBP12.76□□□□□ -0.37
COL12A1-202ENST00000345356 ZNF555Q8NEP9 628 aa12.76□□□□□ -0.37
COL12A1-202ENST00000345356 CEP170P1Q96L14 293 aa12.76□□□□□ -0.37
COL12A1-202ENST00000345356 MTA3Q9BTC8 594 aa12.76□□□□□ -0.37
COL12A1-202ENST00000345356 FOXP3Q9BZS1 431 aa12.76□□□□□ -0.37
COL12A1-202ENST00000345356 NACA2Q9H009 215 aa12.76□□□□□ -0.37
COL12A1-202ENST00000345356 ATP10AO60312 1499 aa12.76□□□□□ -0.37
COL12A1-202ENST00000345356 CEP170Q5SW79 1584 aa12.75□□□□□ -0.37
COL12A1-202ENST00000345356 DDR1Q08345 913 aa12.75□□□□□ -0.37
COL12A1-202ENST00000345356 TMC5Q6UXY8 1006 aa12.75□□□□□ -0.37
COL12A1-202ENST00000345356 LRRC74BQ6ZQY2 392 aa12.75□□□□□ -0.37
COL12A1-202ENST00000345356 TPCN2Q8NHX9 752 aa12.75□□□□□ -0.37
COL12A1-202ENST00000345356 WDR60Q8WVS4 1066 aa12.75□□□□□ -0.37
COL12A1-202ENST00000345356 FAM118BQ9BPY3 351 aa12.75□□□□□ -0.37
COL12A1-202ENST00000345356 TMEM260Q9NX78 707 aa12.75□□□□□ -0.37
COL12A1-202ENST00000345356 ALG6Q9Y672 507 aa12.75□□□□□ -0.37
COL12A1-202ENST00000345356 POTEFA5A3E0 1075 aa12.75□□□□□ -0.37
COL12A1-202ENST00000345356 KRT16P08779 473 aa12.75□□□□□ -0.37
COL12A1-202ENST00000345356 POTEIP0CG38 1075 aa12.75□□□□□ -0.37
COL12A1-202ENST00000345356 COMTP21964 271 aa12.75□□□□□ -0.37
COL12A1-202ENST00000345356 SLC1A1P43005 524 aa12.75□□□□□ -0.37
COL12A1-202ENST00000345356 PEX3P56589 373 aa12.75□□□□□ -0.37
COL12A1-202ENST00000345356 SYCP2LQ5T4T6 812 aa12.75□□□□□ -0.37
COL12A1-202ENST00000345356 POTEGQ6S5H5 508 aa12.75□□□□□ -0.37
COL12A1-202ENST00000345356 POTEEQ6S8J3 1075 aa12.75□□□□□ -0.37
COL12A1-202ENST00000345356 C7orf25Q9BPX7 421 aa12.75□□□□□ -0.37
COL12A1-202ENST00000345356 STK33Q9BYT3 514 aa12.75□□□□□ -0.37
COL12A1-202ENST00000345356 DDX56Q9NY93 547 aaKnown RBP12.75□□□□□ -0.37
COL12A1-202ENST00000345356 SAMD9Q5K651 1589 aa12.75□□□□□ -0.37
COL12A1-202ENST00000345356 ATP7BP35670 1465 aa12.75□□□□□ -0.37
COL12A1-202ENST00000345356 DGKIO75912 1065 aa12.75□□□□□ -0.37
COL12A1-202ENST00000345356 OSBPP22059 807 aa12.75□□□□□ -0.37
COL12A1-202ENST00000345356 CHI3L2Q15782 390 aa12.75□□□□□ -0.37
COL12A1-202ENST00000345356 ATP6V0A1Q93050 837 aa12.75□□□□□ -0.37
COL12A1-202ENST00000345356 COQ7Q99807 217 aa12.75□□□□□ -0.37
COL12A1-202ENST00000345356 EPHB2P29323 1055 aa12.75□□□□□ -0.37
COL12A1-202ENST00000345356 OLFML1Q6UWY5 402 aa12.75□□□□□ -0.37
COL12A1-202ENST00000345356 C3orf62Q6ZUJ4 267 aa12.75□□□□□ -0.37
COL12A1-202ENST00000345356 HEATR4Q86WZ0 1026 aa12.75□□□□□ -0.37
COL12A1-202ENST00000345356 CLEC4FQ8N1N0 589 aa12.75□□□□□ -0.37
COL12A1-202ENST00000345356 ATXN7L3BQ96GX2 97 aa12.75□□□□□ -0.37
COL12A1-202ENST00000345356 GORASP1Q9BQQ3 440 aa12.75□□□□□ -0.37
COL12A1-202ENST00000345356 KRT7P08729 469 aa12.75□□□□□ -0.37
COL12A1-202ENST00000345356 TMEM253P0C7T8 217 aa12.75□□□□□ -0.37
COL12A1-202ENST00000345356 CAPRIN1Q14444 709 aaKnown RBP12.75□□□□□ -0.37
COL12A1-202ENST00000345356 OR9Q1Q8NGQ5 310 aa12.75□□□□□ -0.37
COL12A1-202ENST00000345356 AIPL1Q9NZN9 384 aa12.75□□□□□ -0.37
COL12A1-202ENST00000345356 UTYO14607 1347 aa12.75□□□□□ -0.37
COL12A1-202ENST00000345356 PJA2O43164 708 aa12.74□□□□□ -0.37
COL12A1-202ENST00000345356 CYP26A1O43174 497 aa12.74□□□□□ -0.37
COL12A1-202ENST00000345356 CLEC4GQ6UXB4 293 aa12.74□□□□□ -0.37
COL12A1-202ENST00000345356 LPCAT2Q7L5N7 544 aa12.74□□□□□ -0.37
COL12A1-202ENST00000345356 SYN2Q92777 582 aaPredicted RBP12.74□□□□□ -0.37
COL12A1-202ENST00000345356 C18orf8Q96DM3 657 aa12.74□□□□□ -0.37
COL12A1-202ENST00000345356 PHF20Q9BVI0 1012 aa12.74□□□□□ -0.37
COL12A1-202ENST00000345356 SEC31BQ9NQW1 1179 aa12.74□□□□□ -0.37
COL12A1-202ENST00000345356 RARGP13631 454 aa12.74□□□□□ -0.37
COL12A1-202ENST00000345356 SLC9A1P19634 815 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms