RNA–Protein interactions for RNA: ENST00000344627.10

SGCA-202, Transcript of sarcoglycan alpha, humanhuman

TSL 1 (best) BASIC

Gene SGCA, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-202ENST00000344627 PRKD2Q9BZL6 878 aa13.66□□□□□ -0.22
SGCA-202ENST00000344627 NT5C3AQ9H0P0 336 aa13.66□□□□□ -0.22
SGCA-202ENST00000344627 PIDD1Q9HB75 910 aa13.66□□□□□ -0.22
SGCA-202ENST00000344627 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.66□□□□□ -0.22
SGCA-202ENST00000344627 CACNG4Q9UBN1 327 aa13.66□□□□□ -0.22
SGCA-202ENST00000344627 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.66□□□□□ -0.22
SGCA-202ENST00000344627 VWA3AA6NCI4 1184 aa13.65□□□□□ -0.22
SGCA-202ENST00000344627 CASTOR2A6NHX0 329 aa13.65□□□□□ -0.22
SGCA-202ENST00000344627 HIP1RO75146 1068 aa13.65□□□□□ -0.22
SGCA-202ENST00000344627 RECQL4O94761 1208 aa13.65□□□□□ -0.22
SGCA-202ENST00000344627 THP07101 528 aa13.65□□□□□ -0.22
SGCA-202ENST00000344627 SPATA31D3P0C874 917 aa13.65□□□□□ -0.22
SGCA-202ENST00000344627 GBP2P32456 591 aaPredicted RBP13.65□□□□□ -0.22
SGCA-202ENST00000344627 PRPHP41219 470 aa13.65□□□□□ -0.22
SGCA-202ENST00000344627 DMP1Q13316 513 aaPredicted RBP13.65□□□□□ -0.22
SGCA-202ENST00000344627 TUSC3Q13454 348 aa13.65□□□□□ -0.22
SGCA-202ENST00000344627 HSP90AA2PQ14568 343 aaPredicted RBP13.65□□□□□ -0.22
SGCA-202ENST00000344627 UVSSAQ2YD98 709 aa13.65□□□□□ -0.22
SGCA-202ENST00000344627 DCAF4L1Q3SXM0 396 aa13.65□□□□□ -0.22
SGCA-202ENST00000344627 ATF7IP2Q5U623 682 aa13.65□□□□□ -0.22
SGCA-202ENST00000344627 EEF1DP3Q658K8 133 aa13.65□□□□□ -0.22
SGCA-202ENST00000344627 LARP1BQ659C4 914 aaKnown RBP13.65□□□□□ -0.22
SGCA-202ENST00000344627 PHLDB3Q6NSJ2 640 aa13.65□□□□□ -0.22
SGCA-202ENST00000344627 LILRA6Q6PI73 481 aa13.65□□□□□ -0.22
SGCA-202ENST00000344627 SPATA31D4Q6ZUB0 917 aa13.65□□□□□ -0.22
SGCA-202ENST00000344627 CEP57Q86XR8 500 aa13.65□□□□□ -0.22
SGCA-202ENST00000344627 PALB2Q86YC2 1186 aa13.65□□□□□ -0.22
SGCA-202ENST00000344627 GSTCDQ8NEC7 633 aa13.65□□□□□ -0.22
SGCA-202ENST00000344627 FLCNQ8NFG4 579 aa13.65□□□□□ -0.22
SGCA-202ENST00000344627 HASPINQ8TF76 798 aa13.65□□□□□ -0.22
SGCA-202ENST00000344627 RIN2Q8WYP3 895 aaPredicted RBP13.65□□□□□ -0.22
SGCA-202ENST00000344627 SHDQ96IW2 340 aa13.65□□□□□ -0.22
SGCA-202ENST00000344627 B3GALT6Q96L58 329 aa13.65□□□□□ -0.22
SGCA-202ENST00000344627 GPR62Q9BZJ7 368 aa13.65□□□□□ -0.22
SGCA-202ENST00000344627 CCDC113Q9H0I3 377 aa13.65□□□□□ -0.22
SGCA-202ENST00000344627 KMT5AQ9NQR1 393 aa13.65□□□□□ -0.22
SGCA-202ENST00000344627 KCNG1Q9UIX4 513 aa13.65□□□□□ -0.22
SGCA-202ENST00000344627 ZDBF2Q9HCK1 2354 aa13.65□□□□□ -0.22
SGCA-202ENST00000344627 PLXNA3P51805 1871 aa13.64□□□□□ -0.23
SGCA-202ENST00000344627 PRR23AA6NEV1 266 aa13.64□□□□□ -0.23
SGCA-202ENST00000344627 SFI1A8K8P3 1242 aa13.64□□□□□ -0.23
SGCA-202ENST00000344627 TGM5O43548 720 aa13.64□□□□□ -0.23
SGCA-202ENST00000344627 ZMYND10O75800 440 aa13.64□□□□□ -0.23
SGCA-202ENST00000344627 NPTX2P47972 431 aa13.64□□□□□ -0.23
SGCA-202ENST00000344627 ATP2C1P98194 919 aaPredicted RBP13.64□□□□□ -0.23
SGCA-202ENST00000344627 RAD51AP2Q09MP3 1159 aa13.64□□□□□ -0.23
SGCA-202ENST00000344627 NT5DC1Q5TFE4 455 aa13.64□□□□□ -0.23
SGCA-202ENST00000344627 CWF19L1Q69YN2 538 aaKnown RBP13.64□□□□□ -0.23
SGCA-202ENST00000344627 PIK3R5Q8WYR1 880 aa13.64□□□□□ -0.23
SGCA-202ENST00000344627 DRC1Q96MC2 740 aa13.64□□□□□ -0.23
SGCA-202ENST00000344627 TBC1D32Q96NH3 1257 aa13.64□□□□□ -0.23
SGCA-202ENST00000344627 PAAF1Q9BRP4 392 aa13.64□□□□□ -0.23
SGCA-202ENST00000344627 TCHPQ9BT92 498 aa13.64□□□□□ -0.23
SGCA-202ENST00000344627 RUSC1Q9BVN2 902 aa13.64□□□□□ -0.23
SGCA-202ENST00000344627 SLC2A4RGQ9NR83 387 aa13.64□□□□□ -0.23
SGCA-202ENST00000344627 USP34Q70CQ2 3546 aa13.64□□□□□ -0.23
SGCA-202ENST00000344627 MTCL1Q9Y4B5 1905 aaKnown RBP13.63□□□□□ -0.23
SGCA-202ENST00000344627 TMEM189-UBE2V1I3L0A0 370 aa13.63□□□□□ -0.23
SGCA-202ENST00000344627 TRAPPC3O43617 180 aa13.63□□□□□ -0.23
SGCA-202ENST00000344627 XYLBO75191 536 aa13.63□□□□□ -0.23
SGCA-202ENST00000344627 EDN1P05305 212 aa13.63□□□□□ -0.23
SGCA-202ENST00000344627 LAMP2P13473 410 aa13.63□□□□□ -0.23
SGCA-202ENST00000344627 NPR3P17342 541 aa13.63□□□□□ -0.23
SGCA-202ENST00000344627 RFX1P22670 979 aa13.63□□□□□ -0.23
SGCA-202ENST00000344627 OSTNP61366 133 aa13.63□□□□□ -0.23
SGCA-202ENST00000344627 LIN9Q5TKA1 542 aa13.63□□□□□ -0.23
SGCA-202ENST00000344627 FAM171A1Q5VUB5 890 aa13.63□□□□□ -0.23
SGCA-202ENST00000344627 RINT1Q6NUQ1 792 aa13.63□□□□□ -0.23
SGCA-202ENST00000344627 ZC3H14Q6PJT7 736 aaKnown RBP13.63□□□□□ -0.23
SGCA-202ENST00000344627 MTSS1LQ765P7 747 aa13.63□□□□□ -0.23
SGCA-202ENST00000344627 KCNK18Q7Z418 384 aa13.63□□□□□ -0.23
SGCA-202ENST00000344627 SIX5Q8N196 739 aa13.63□□□□□ -0.23
SGCA-202ENST00000344627 SLC44A3Q8N4M1 653 aa13.63□□□□□ -0.23
SGCA-202ENST00000344627 DTWD2Q8NBA8 298 aa13.63□□□□□ -0.23
SGCA-202ENST00000344627 ZNF707Q96C28 371 aaPredicted RBP13.63□□□□□ -0.23
SGCA-202ENST00000344627 UROC1Q96N76 676 aa13.63□□□□□ -0.23
SGCA-202ENST00000344627 TTPALQ9BTX7 342 aa13.63□□□□□ -0.23
SGCA-202ENST00000344627 MMTAG2Q9BU76 263 aaKnown RBP13.63□□□□□ -0.23
SGCA-202ENST00000344627 FAM86C1Q9NVL1 165 aa13.63□□□□□ -0.23
SGCA-202ENST00000344627 C2orf16Q68DN1 1984 aa13.63□□□□□ -0.23
SGCA-202ENST00000344627 DENND4AQ7Z401 1863 aa13.62□□□□□ -0.23
SGCA-202ENST00000344627 VPS37CA5D8V6 355 aaPredicted RBP13.62□□□□□ -0.23
SGCA-202ENST00000344627 ANHXE9PGG2 379 aa13.62□□□□□ -0.23
SGCA-202ENST00000344627 PTGESO14684 152 aa13.62□□□□□ -0.23
SGCA-202ENST00000344627 SLC16A4O15374 487 aa13.62□□□□□ -0.23
SGCA-202ENST00000344627 HARSP12081 509 aaKnown RBP13.62□□□□□ -0.23
SGCA-202ENST00000344627 RPL17P18621 184 aaKnown RBP13.62□□□□□ -0.23
SGCA-202ENST00000344627 MATR3P43243 847 aaKnown RBP eCLIP13.62□□□□□ -0.23
SGCA-202ENST00000344627 MAGEA9P43362 315 aa13.62□□□□□ -0.23
SGCA-202ENST00000344627 YARSP54577 528 aaKnown RBP13.62□□□□□ -0.23
SGCA-202ENST00000344627 STRN3Q13033 797 aa13.62□□□□□ -0.23
SGCA-202ENST00000344627 DHX8Q14562 1220 aaKnown RBP13.62□□□□□ -0.23
SGCA-202ENST00000344627 ZNF568Q3ZCX4 644 aa13.62□□□□□ -0.23
SGCA-202ENST00000344627 GLRA4Q5JXX5 417 aa13.62□□□□□ -0.23
SGCA-202ENST00000344627 RSPO2Q6UXX9 243 aaPredicted RBP13.62□□□□□ -0.23
SGCA-202ENST00000344627 C1orf186Q6ZWK4 172 aa13.62□□□□□ -0.23
SGCA-202ENST00000344627 KCTD17Q8N5Z5 321 aa13.62□□□□□ -0.23
SGCA-202ENST00000344627 RASSF8Q8NHQ8 419 aa13.62□□□□□ -0.23
SGCA-202ENST00000344627 FEZF2Q8TBJ5 459 aa13.62□□□□□ -0.23
SGCA-202ENST00000344627 SNX27Q96L92 541 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms