RNA–Protein interactions for RNA: ENST00000344626.8

SMARCA4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best) BASIC

Gene SMARCA4, Length 5,392 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-201ENST00000344626 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.45■□□□□ 0.382e-8■■■□□ 16.1
SMARCA4-201ENST00000344626 FMR1Q06787 632 aaKnown RBP eCLIP17.45■□□□□ 0.384e-7■■■□□ 18.5
SMARCA4-201ENST00000344626 ATP8B4Q8TF62 1192 aa17.45■□□□□ 0.38
SMARCA4-201ENST00000344626 FARP2O94887 1054 aaPredicted RBP17.45■□□□□ 0.38
SMARCA4-201ENST00000344626 SOX5P35711 763 aa17.45■□□□□ 0.38
SMARCA4-201ENST00000344626 SNX1Q13596 522 aa17.45■□□□□ 0.38
SMARCA4-201ENST00000344626 ZC2HC1CQ53FD0 456 aaPredicted RBP17.45■□□□□ 0.38
SMARCA4-201ENST00000344626 ILDR2Q71H61 639 aa17.45■□□□□ 0.38
SMARCA4-201ENST00000344626 CYP2W1Q8TAV3 490 aa17.45■□□□□ 0.38
SMARCA4-201ENST00000344626 PPP4R1Q8TF05 950 aa17.45■□□□□ 0.38
SMARCA4-201ENST00000344626 AGO4Q9HCK5 861 aaKnown RBP17.45■□□□□ 0.38
SMARCA4-201ENST00000344626 RIC1Q4ADV7 1423 aa17.45■□□□□ 0.38
SMARCA4-201ENST00000344626 EBAG9O00559 213 aa17.44■□□□□ 0.38
SMARCA4-201ENST00000344626 AMHP03971 560 aa17.44■□□□□ 0.38
SMARCA4-201ENST00000344626 HTRA3P83110 453 aa17.44■□□□□ 0.38
SMARCA4-201ENST00000344626 METTL16Q86W50 562 aaKnown RBP17.44■□□□□ 0.38
SMARCA4-201ENST00000344626 CCDC13Q8IYE1 715 aa17.44■□□□□ 0.38
SMARCA4-201ENST00000344626 MKNK1Q9BUB5 465 aa17.44■□□□□ 0.38
SMARCA4-201ENST00000344626 LSM7Q9UK45 103 aaKnown RBP17.44■□□□□ 0.38
SMARCA4-201ENST00000344626 KRT7P08729 469 aa17.44■□□□□ 0.38
SMARCA4-201ENST00000344626 NAMPTP43490 491 aa17.44■□□□□ 0.38
SMARCA4-201ENST00000344626 BASP1P80723 227 aaKnown RBP17.44■□□□□ 0.38
SMARCA4-201ENST00000344626 SEZ6Q53EL9 994 aa17.44■□□□□ 0.38
SMARCA4-201ENST00000344626 ADSSL1Q8N142 457 aa17.44■□□□□ 0.38
SMARCA4-201ENST00000344626 TRPV6Q9H1D0 765 aa17.44■□□□□ 0.38
SMARCA4-201ENST00000344626 CYBBP04839 570 aa17.44■□□□□ 0.38
SMARCA4-201ENST00000344626 ZNF280AP59817 542 aaPredicted RBP17.44■□□□□ 0.38
SMARCA4-201ENST00000344626 HASPINQ8TF76 798 aa17.44■□□□□ 0.38
SMARCA4-201ENST00000344626 PDCD6IPQ8WUM4 868 aaKnown RBP17.44■□□□□ 0.38
SMARCA4-201ENST00000344626 CACYBPQ9HB71 228 aaKnown RBP17.44■□□□□ 0.38
SMARCA4-201ENST00000344626 ZRANB2O95218 330 aaKnown RBP eCLIP17.44■□□□□ 0.38
SMARCA4-201ENST00000344626 INHBAP08476 426 aa17.44■□□□□ 0.38
SMARCA4-201ENST00000344626 NIPA1Q7RTP0 329 aa17.44■□□□□ 0.38
SMARCA4-201ENST00000344626 TNS4Q8IZW8 715 aa17.44■□□□□ 0.38
SMARCA4-201ENST00000344626 UBN1Q9NPG3 1134 aa17.44■□□□□ 0.38
SMARCA4-201ENST00000344626 ABHD10Q9NUJ1 306 aa17.44■□□□□ 0.38
SMARCA4-201ENST00000344626 UBQLN1Q9UMX0 589 aaKnown RBP17.44■□□□□ 0.38
SMARCA4-201ENST00000344626 MORC4Q8TE76 937 aa17.43■□□□□ 0.38
SMARCA4-201ENST00000344626 ABI2Q9NYB9 513 aaPredicted RBP17.43■□□□□ 0.38
SMARCA4-201ENST00000344626 CYP39A1Q9NYL5 469 aa17.43■□□□□ 0.38
SMARCA4-201ENST00000344626 FAN1Q9Y2M0 1017 aa17.43■□□□□ 0.38
SMARCA4-201ENST00000344626 ENC1O14682 589 aa17.43■□□□□ 0.38
SMARCA4-201ENST00000344626 HMBSP08397 361 aa17.43■□□□□ 0.38
SMARCA4-201ENST00000344626 CA4P22748 312 aa17.43■□□□□ 0.38
SMARCA4-201ENST00000344626 PDE1BQ01064 536 aa17.43■□□□□ 0.38
SMARCA4-201ENST00000344626 CRHR2Q13324 411 aa17.43■□□□□ 0.38
SMARCA4-201ENST00000344626 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.43■□□□□ 0.38
SMARCA4-201ENST00000344626 GAS2L3Q86XJ1 694 aa17.43■□□□□ 0.38
SMARCA4-201ENST00000344626 REPS2Q8NFH8 660 aa17.43■□□□□ 0.38
SMARCA4-201ENST00000344626 PURBQ96QR8 312 aaKnown RBP17.43■□□□□ 0.38
SMARCA4-201ENST00000344626 TRIM56Q9BRZ2 755 aaKnown RBP17.43■□□□□ 0.38
SMARCA4-201ENST00000344626 SALL3Q9BXA9 1300 aa17.43■□□□□ 0.38
SMARCA4-201ENST00000344626 FOXN1O15353 648 aa17.43■□□□□ 0.38
SMARCA4-201ENST00000344626 ALDH2P05091 517 aa17.43■□□□□ 0.38
SMARCA4-201ENST00000344626 KIAA1755Q5JYT7 1200 aa17.43■□□□□ 0.38
SMARCA4-201ENST00000344626 CYP4A22Q5TCH4 519 aa17.43■□□□□ 0.38
SMARCA4-201ENST00000344626 MON2Q7Z3U7 1717 aa17.43■□□□□ 0.38
SMARCA4-201ENST00000344626 GUCY2DQ02846 1103 aa17.43■□□□□ 0.38
SMARCA4-201ENST00000344626 FAM102AQ5T9C2 384 aaPredicted RBP17.43■□□□□ 0.38
SMARCA4-201ENST00000344626 KSR1Q8IVT5 923 aa17.43■□□□□ 0.38
SMARCA4-201ENST00000344626 SLAIN1Q8ND83 568 aa17.43■□□□□ 0.38
SMARCA4-201ENST00000344626 MKL1Q969V6 931 aa17.43■□□□□ 0.38
SMARCA4-201ENST00000344626 EGFRP00533 1210 aa17.43■□□□□ 0.38
SMARCA4-201ENST00000344626 PEX10O60683 326 aa17.42■□□□□ 0.38
SMARCA4-201ENST00000344626 PARVAQ9NVD7 372 aa17.42■□□□□ 0.38
SMARCA4-201ENST00000344626 TBX20Q9UMR3 447 aa17.42■□□□□ 0.38
SMARCA4-201ENST00000344626 GPR25O00155 361 aa17.42■□□□□ 0.38
SMARCA4-201ENST00000344626 P4HA2O15460 535 aa17.42■□□□□ 0.38
SMARCA4-201ENST00000344626 MYOM1P52179 1685 aa17.42■□□□□ 0.38
SMARCA4-201ENST00000344626 RAD51Q06609 339 aa17.42■□□□□ 0.38
SMARCA4-201ENST00000344626 NME3Q13232 169 aa17.42■□□□□ 0.38
SMARCA4-201ENST00000344626 CAPN12Q6ZSI9 719 aa17.42■□□□□ 0.38
SMARCA4-201ENST00000344626 C4orf19Q8IY42 314 aa17.42■□□□□ 0.38
SMARCA4-201ENST00000344626 STKLD1Q8NE28 680 aa17.42■□□□□ 0.38
SMARCA4-201ENST00000344626 DDX56Q9NY93 547 aaKnown RBP17.42■□□□□ 0.38
SMARCA4-201ENST00000344626 WDR35Q9P2L0 1181 aa17.42■□□□□ 0.38
SMARCA4-201ENST00000344626 SAT1P21673 171 aa17.42■□□□□ 0.38
SMARCA4-201ENST00000344626 FGFR4P22455 802 aa17.42■□□□□ 0.38
SMARCA4-201ENST00000344626 MED15Q96RN5 788 aa17.42■□□□□ 0.38
SMARCA4-201ENST00000344626 POMCP01189 267 aa17.42■□□□□ 0.38
SMARCA4-201ENST00000344626 MAP7Q14244 749 aa17.42■□□□□ 0.38
SMARCA4-201ENST00000344626 RAB44Q7Z6P3 723 aaPredicted RBP17.42■□□□□ 0.38
SMARCA4-201ENST00000344626 ZNF564Q8TBZ8 553 aaPredicted RBP17.42■□□□□ 0.38
SMARCA4-201ENST00000344626 PIK3C2AO00443 1686 aa17.42■□□□□ 0.38
SMARCA4-201ENST00000344626 KPNA2P52292 529 aaKnown RBP17.41■□□□□ 0.38
SMARCA4-201ENST00000344626 NOP9Q86U38 636 aaKnown RBP17.41■□□□□ 0.38
SMARCA4-201ENST00000344626 TTC25Q96NG3 672 aa17.41■□□□□ 0.38
SMARCA4-201ENST00000344626 ZDHHC9Q9Y397 364 aa17.41■□□□□ 0.38
SMARCA4-201ENST00000344626 LCP1P13796 627 aa17.41■□□□□ 0.38
SMARCA4-201ENST00000344626 STX2P32856 288 aa17.41■□□□□ 0.38
SMARCA4-201ENST00000344626 FMO5P49326 533 aa17.41■□□□□ 0.38
SMARCA4-201ENST00000344626 TAF6P49848 677 aa17.41■□□□□ 0.38
SMARCA4-201ENST00000344626 BCAR1P56945 870 aa17.41■□□□□ 0.38
SMARCA4-201ENST00000344626 MAPRE1Q15691 268 aaKnown RBP17.41■□□□□ 0.38
SMARCA4-201ENST00000344626 FBXL16Q8N461 479 aa17.41■□□□□ 0.38
SMARCA4-201ENST00000344626 PORCNQ9H237 461 aa17.41■□□□□ 0.38
SMARCA4-201ENST00000344626 TMEM8AQ9HCN3 771 aa17.41■□□□□ 0.38
SMARCA4-201ENST00000344626 APEX2Q9UBZ4 518 aa17.41■□□□□ 0.38
SMARCA4-201ENST00000344626 TJP2Q9UDY2 1190 aa17.41■□□□□ 0.38
SMARCA4-201ENST00000344626 ZC3H4Q9UPT8 1303 aaKnown RBP17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms