RNA–Protein interactions for RNA: ENST00000344376.9

ATG4B-201, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 1,566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-201ENST00000344376 CBX2Q14781 532 aaPredicted RBP17.59■□□□□ 0.41
ATG4B-201ENST00000344376 GLRA4Q5JXX5 417 aa17.59■□□□□ 0.41
ATG4B-201ENST00000344376 FOXD4L5Q5VV16 416 aaPredicted RBP17.59■□□□□ 0.41
ATG4B-201ENST00000344376 GPR65Q8IYL9 337 aa17.59■□□□□ 0.41
ATG4B-201ENST00000344376 CEP120Q8N960 986 aa17.59■□□□□ 0.41
ATG4B-201ENST00000344376 FOXD4L4Q8WXT5 416 aaPredicted RBP17.59■□□□□ 0.41
ATG4B-201ENST00000344376 RABGGTAQ92696 567 aa17.59■□□□□ 0.41
ATG4B-201ENST00000344376 KCNN1Q92952 543 aa17.59■□□□□ 0.41
ATG4B-201ENST00000344376 UROC1Q96N76 676 aa17.59■□□□□ 0.41
ATG4B-201ENST00000344376 APOL5Q9BWW9 433 aa17.59■□□□□ 0.41
ATG4B-201ENST00000344376 PHF7Q9BWX1 381 aaPredicted RBP17.59■□□□□ 0.41
ATG4B-201ENST00000344376 S1PR5Q9H228 398 aa17.59■□□□□ 0.41
ATG4B-201ENST00000344376 SLC38A7Q9NVC3 462 aa17.59■□□□□ 0.41
ATG4B-201ENST00000344376 DPP7Q9UHL4 492 aa17.59■□□□□ 0.41
ATG4B-201ENST00000344376 MUC3AQ02505 3323 aa17.59■□□□□ 0.41
ATG4B-201ENST00000344376 SPTLC2O15270 562 aa17.58■□□□□ 0.41
ATG4B-201ENST00000344376 CLDN3O15551 220 aa17.58■□□□□ 0.41
ATG4B-201ENST00000344376 LILRB3O75022 631 aa17.58■□□□□ 0.41
ATG4B-201ENST00000344376 KIF4AO95239 1232 aa17.58■□□□□ 0.41
ATG4B-201ENST00000344376 EFEMP2O95967 443 aa17.58■□□□□ 0.41
ATG4B-201ENST00000344376 LIG4P49917 911 aa17.58■□□□□ 0.41
ATG4B-201ENST00000344376 KIAA0319Q5VV43 1072 aa17.58■□□□□ 0.41
ATG4B-201ENST00000344376 SV2BQ7L1I2 683 aa17.58■□□□□ 0.41
ATG4B-201ENST00000344376 TAS1R1Q7RTX1 841 aa17.58■□□□□ 0.41
ATG4B-201ENST00000344376 LINC00301Q8NCQ3 95 aa17.58■□□□□ 0.41
ATG4B-201ENST00000344376 SLC22A17Q8WUG5 538 aa17.58■□□□□ 0.41
ATG4B-201ENST00000344376 FBXL18Q96ME1 805 aa17.58■□□□□ 0.41
ATG4B-201ENST00000344376 NECTIN4Q96NY8 510 aa17.58■□□□□ 0.41
ATG4B-201ENST00000344376 PPP1R10Q96QC0 940 aaKnown RBP17.58■□□□□ 0.41
ATG4B-201ENST00000344376 GPR62Q9BZJ7 368 aa17.58■□□□□ 0.41
ATG4B-201ENST00000344376 ADAM7Q9H2U9 754 aa17.58■□□□□ 0.41
ATG4B-201ENST00000344376 CHST7Q9NS84 486 aa17.58■□□□□ 0.41
ATG4B-201ENST00000344376 CACNG4Q9UBN1 327 aa17.58■□□□□ 0.41
ATG4B-201ENST00000344376 ABLIM1O14639 778 aa17.57■□□□□ 0.4
ATG4B-201ENST00000344376 HNRNPDLO14979 420 aaKnown RBP17.57■□□□□ 0.4
ATG4B-201ENST00000344376 PPP6R2O75170 966 aa17.57■□□□□ 0.4
ATG4B-201ENST00000344376 YEATS4O95619 227 aa17.57■□□□□ 0.4
ATG4B-201ENST00000344376 ALADP13716 330 aa17.57■□□□□ 0.4
ATG4B-201ENST00000344376 STAT6P42226 847 aa17.57■□□□□ 0.4
ATG4B-201ENST00000344376 CLCN4P51793 760 aa17.57■□□□□ 0.4
ATG4B-201ENST00000344376 MCL1Q07820 350 aa17.57■□□□□ 0.4
ATG4B-201ENST00000344376 NAB2Q15742 525 aa17.57■□□□□ 0.4
ATG4B-201ENST00000344376 RARS2Q5T160 578 aaKnown RBP17.57■□□□□ 0.4
ATG4B-201ENST00000344376 SPRYD3Q8NCJ5 442 aa17.57■□□□□ 0.4
ATG4B-201ENST00000344376 HASPINQ8TF76 798 aa17.57■□□□□ 0.4
ATG4B-201ENST00000344376 ZBTB45Q96K62 511 aaPredicted RBP17.57■□□□□ 0.4
ATG4B-201ENST00000344376 SNX27Q96L92 541 aa17.57■□□□□ 0.4
ATG4B-201ENST00000344376 RIPOR3Q96MK2 946 aa17.57■□□□□ 0.4
ATG4B-201ENST00000344376 PAAF1Q9BRP4 392 aa17.57■□□□□ 0.4
ATG4B-201ENST00000344376 CXCL16Q9H2A7 254 aa17.57■□□□□ 0.4
ATG4B-201ENST00000344376 SFXN1Q9H9B4 322 aa17.57■□□□□ 0.4
ATG4B-201ENST00000344376 RXFP1Q9HBX9 757 aa17.57■□□□□ 0.4
ATG4B-201ENST00000344376 TBX20Q9UMR3 447 aa17.57■□□□□ 0.4
ATG4B-201ENST00000344376 SMIM28A0A1B0GU29 152 aa17.57■□□□□ 0.4
ATG4B-201ENST00000344376 TEX28O15482 410 aa17.57■□□□□ 0.4
ATG4B-201ENST00000344376 GLUD1P00367 558 aa17.57■□□□□ 0.4
ATG4B-201ENST00000344376 F13A1P00488 732 aa17.57■□□□□ 0.4
ATG4B-201ENST00000344376 MTHFRP42898 656 aa17.57■□□□□ 0.4
ATG4B-201ENST00000344376 KYAT1Q16773 422 aa17.57■□□□□ 0.4
ATG4B-201ENST00000344376 RIN2Q8WYP3 895 aaPredicted RBP17.57■□□□□ 0.4
ATG4B-201ENST00000344376 TTPALQ9BTX7 342 aa17.57■□□□□ 0.4
ATG4B-201ENST00000344376 TFIP11Q9UBB9 837 aaKnown RBP17.57■□□□□ 0.4
ATG4B-201ENST00000344376 PI4K2BG5E9Z4 385 aa17.56■□□□□ 0.4
ATG4B-201ENST00000344376 DCXO43602 365 aa17.56■□□□□ 0.4
ATG4B-201ENST00000344376 XKR4Q5GH76 650 aa17.56■□□□□ 0.4
ATG4B-201ENST00000344376 FAM171A1Q5VUB5 890 aa17.56■□□□□ 0.4
ATG4B-201ENST00000344376 PDXDC1Q6P996 788 aa17.56■□□□□ 0.4
ATG4B-201ENST00000344376 DCLRE1AQ6PJP8 1040 aa17.56■□□□□ 0.4
ATG4B-201ENST00000344376 ALKAL1Q6UXT8 129 aa17.56■□□□□ 0.4
ATG4B-201ENST00000344376 DYMQ7RTS9 669 aa17.56■□□□□ 0.4
ATG4B-201ENST00000344376 DDX12PQ92771 950 aa17.56■□□□□ 0.4
ATG4B-201ENST00000344376 DDX27Q96GQ7 796 aaKnown RBP17.56■□□□□ 0.4
ATG4B-201ENST00000344376 RPGRIP1Q96KN7 1286 aa17.56■□□□□ 0.4
ATG4B-201ENST00000344376 B3GALT6Q96L58 329 aa17.56■□□□□ 0.4
ATG4B-201ENST00000344376 EPHX3Q9H6B9 360 aa17.56■□□□□ 0.4
ATG4B-201ENST00000344376 CNTN3Q9P232 1028 aa17.56■□□□□ 0.4
ATG4B-201ENST00000344376 FNIP2Q9P278 1114 aa17.56■□□□□ 0.4
ATG4B-201ENST00000344376 SEL1LQ9UBV2 794 aa17.56■□□□□ 0.4
ATG4B-201ENST00000344376 LOC730098B7Z3J9 87 aa17.55■□□□□ 0.4
ATG4B-201ENST00000344376 TMEM189-UBE2V1I3L0A0 370 aa17.55■□□□□ 0.4
ATG4B-201ENST00000344376 TRAPPC3O43617 180 aa17.55■□□□□ 0.4
ATG4B-201ENST00000344376 B3GAT3O94766 335 aa17.55■□□□□ 0.4
ATG4B-201ENST00000344376 PIGRP01833 764 aa17.55■□□□□ 0.4
ATG4B-201ENST00000344376 KCNE1P15382 129 aa17.55■□□□□ 0.4
ATG4B-201ENST00000344376 GAP43P17677 238 aa17.55■□□□□ 0.4
ATG4B-201ENST00000344376 CLCNKBP51801 687 aa17.55■□□□□ 0.4
ATG4B-201ENST00000344376 ATAT1Q5SQI0 421 aa17.55■□□□□ 0.4
ATG4B-201ENST00000344376 ATL3Q6DD88 541 aa17.55■□□□□ 0.4
ATG4B-201ENST00000344376 CEP57Q86XR8 500 aa17.55■□□□□ 0.4
ATG4B-201ENST00000344376 C12orf76Q8N812 135 aaPredicted RBP17.55■□□□□ 0.4
ATG4B-201ENST00000344376 KCNG4Q8TDN1 519 aa17.55■□□□□ 0.4
ATG4B-201ENST00000344376 KHSRPQ92945 711 aaKnown RBP eCLIP17.55■□□□□ 0.43e-7■■□□□ 12.3
ATG4B-201ENST00000344376 PANK2Q9BZ23 570 aa17.55■□□□□ 0.4
ATG4B-201ENST00000344376 MAN1C1Q9NR34 630 aa17.55■□□□□ 0.4
ATG4B-201ENST00000344376 NR2E1Q9Y466 385 aa17.55■□□□□ 0.4
ATG4B-201ENST00000344376 MYH11P35749 1972 aa17.55■□□□□ 0.4
ATG4B-201ENST00000344376 CUTAO60888 179 aa17.54■□□□□ 0.4
ATG4B-201ENST00000344376 C1RP00736 705 aa17.54■□□□□ 0.4
ATG4B-201ENST00000344376 CLTAP09496 248 aa17.54■□□□□ 0.4
ATG4B-201ENST00000344376 NMT1P30419 496 aaKnown RBP17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 6.8 ms