RNA–Protein interactions for RNA: ENST00000344063.6

RPL28-201, Transcript of ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL28, Length 4,796 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-201ENST00000344063 ZFATQ9P243 1243 aa11.56□□□□□ -0.56
RPL28-201ENST00000344063 CSADQ9Y600 493 aa11.56□□□□□ -0.56
RPL28-201ENST00000344063 PJA2O43164 708 aa11.55□□□□□ -0.56
RPL28-201ENST00000344063 KDSRQ06136 332 aa11.55□□□□□ -0.56
RPL28-201ENST00000344063 DYNC1I2Q13409 638 aaKnown RBP11.55□□□□□ -0.56
RPL28-201ENST00000344063 ZNF507Q8TCN5 953 aa11.55□□□□□ -0.56
RPL28-201ENST00000344063 RTFDC1Q9BY42 306 aaPredicted RBP11.55□□□□□ -0.56
RPL28-201ENST00000344063 ZNF408Q9H9D4 720 aa11.55□□□□□ -0.56
RPL28-201ENST00000344063 HSPBP1Q9NZL4 362 aa11.55□□□□□ -0.56
RPL28-201ENST00000344063 SENP1Q9P0U3 644 aa11.55□□□□□ -0.56
RPL28-201ENST00000344063 C15orf41Q9Y2V0 281 aa11.55□□□□□ -0.56
RPL28-201ENST00000344063 TNS2Q63HR2 1409 aa11.55□□□□□ -0.56
RPL28-201ENST00000344063 CLDN3O15551 220 aa11.55□□□□□ -0.56
RPL28-201ENST00000344063 SLC27A3Q5K4L6 730 aa11.55□□□□□ -0.56
RPL28-201ENST00000344063 IZUMO3Q5VZ72 239 aa11.55□□□□□ -0.56
RPL28-201ENST00000344063 CCDC125Q86Z20 511 aa11.55□□□□□ -0.56
RPL28-201ENST00000344063 NAF1Q96HR8 494 aaKnown RBP11.55□□□□□ -0.56
RPL28-201ENST00000344063 PAGR1Q9BTK6 254 aa11.55□□□□□ -0.56
RPL28-201ENST00000344063 FAM129AQ9BZQ8 928 aa11.55□□□□□ -0.56
RPL28-201ENST00000344063 ROPN1BQ9BZX4 212 aaPredicted RBP11.55□□□□□ -0.56
RPL28-201ENST00000344063 ROPN1Q9HAT0 212 aaPredicted RBP11.55□□□□□ -0.56
RPL28-201ENST00000344063 RHBDL2Q9NX52 303 aa11.55□□□□□ -0.56
RPL28-201ENST00000344063 NDE1Q9NXR1 346 aa11.55□□□□□ -0.56
RPL28-201ENST00000344063 IP6K2Q9UHH9 426 aa11.55□□□□□ -0.56
RPL28-201ENST00000344063 TLR3O15455 904 aaKnown RBP11.55□□□□□ -0.56
RPL28-201ENST00000344063 ATMINO43313 823 aaPredicted RBP11.55□□□□□ -0.56
RPL28-201ENST00000344063 CDH16O75309 829 aa11.55□□□□□ -0.56
RPL28-201ENST00000344063 PSMA2P25787 234 aa11.55□□□□□ -0.56
RPL28-201ENST00000344063 PBX1P40424 430 aa11.55□□□□□ -0.56
RPL28-201ENST00000344063 PDE1BQ01064 536 aa11.55□□□□□ -0.56
RPL28-201ENST00000344063 AMPD2Q01433 879 aa11.55□□□□□ -0.56
RPL28-201ENST00000344063 KLHL38Q2WGJ6 581 aa11.55□□□□□ -0.56
RPL28-201ENST00000344063 KRT27Q7Z3Y8 459 aa11.55□□□□□ -0.56
RPL28-201ENST00000344063 PASD1Q8IV76 773 aa11.55□□□□□ -0.56
RPL28-201ENST00000344063 TRAIPQ9BWF2 469 aa11.55□□□□□ -0.56
RPL28-201ENST00000344063 PAPOLBQ9NRJ5 636 aaKnown RBP11.55□□□□□ -0.56
RPL28-201ENST00000344063 PRR12Q9ULL5 1215 aa11.55□□□□□ -0.56
RPL28-201ENST00000344063 SSX2IPQ9Y2D8 614 aa11.55□□□□□ -0.56
RPL28-201ENST00000344063 SPECC1L-ADORA2AF8WAN1 911 aa11.55□□□□□ -0.56
RPL28-201ENST00000344063 RGL2O15211 777 aa11.55□□□□□ -0.56
RPL28-201ENST00000344063 SSTR3P32745 418 aaPredicted RBP11.55□□□□□ -0.56
RPL28-201ENST00000344063 PGM1P36871 562 aa11.55□□□□□ -0.56
RPL28-201ENST00000344063 ZC2HC1CQ53FD0 456 aaPredicted RBP11.55□□□□□ -0.56
RPL28-201ENST00000344063 TXNRD3Q86VQ6 643 aa11.55□□□□□ -0.56
RPL28-201ENST00000344063 GPD1LQ8N335 351 aa11.55□□□□□ -0.56
RPL28-201ENST00000344063 SLC26A7Q8TE54 656 aa11.55□□□□□ -0.56
RPL28-201ENST00000344063 CFAP36Q96G28 342 aa11.55□□□□□ -0.56
RPL28-201ENST00000344063 AIPL1Q9NZN9 384 aa11.55□□□□□ -0.56
RPL28-201ENST00000344063 STRIP2Q9ULQ0 834 aa11.55□□□□□ -0.56
RPL28-201ENST00000344063 REXO2Q9Y3B8 237 aaKnown RBP11.55□□□□□ -0.56
RPL28-201ENST00000344063 A0A0A6YYK5 440 aaPredicted RBP11.54□□□□□ -0.56
RPL28-201ENST00000344063 ENTPD3O75355 529 aa11.54□□□□□ -0.56
RPL28-201ENST00000344063 MED24O75448 989 aa11.54□□□□□ -0.56
RPL28-201ENST00000344063 ELF3P78545 371 aaPredicted RBP11.54□□□□□ -0.56
RPL28-201ENST00000344063 IFI35P80217 286 aaPredicted RBP11.54□□□□□ -0.56
RPL28-201ENST00000344063 STRIP1Q5VSL9 837 aa11.54□□□□□ -0.56
RPL28-201ENST00000344063 OLFML2BQ68BL8 750 aa11.54□□□□□ -0.56
RPL28-201ENST00000344063 ZBED8Q8IZ13 594 aa11.54□□□□□ -0.56
RPL28-201ENST00000344063 SNRNP27Q8WVK2 155 aaKnown RBP11.54□□□□□ -0.56
RPL28-201ENST00000344063 SCFD1Q8WVM8 642 aa11.54□□□□□ -0.56
RPL28-201ENST00000344063 PPWD1Q96BP3 646 aaKnown RBP11.54□□□□□ -0.56
RPL28-201ENST00000344063 TRABDQ9H4I3 376 aa11.54□□□□□ -0.56
RPL28-201ENST00000344063 NFAT5O94916 1531 aa11.54□□□□□ -0.56
RPL28-201ENST00000344063 KRT37O76014 449 aa11.54□□□□□ -0.56
RPL28-201ENST00000344063 SLC12A2P55011 1212 aa11.54□□□□□ -0.56
RPL28-201ENST00000344063 MRPS35P82673 323 aaKnown RBP11.54□□□□□ -0.56
RPL28-201ENST00000344063 PNMA5Q96PV4 448 aa11.54□□□□□ -0.56
RPL28-201ENST00000344063 RIT2Q99578 217 aa11.54□□□□□ -0.56
RPL28-201ENST00000344063 METTL5Q9NRN9 209 aaKnown RBP11.54□□□□□ -0.56
RPL28-201ENST00000344063 ABCF3Q9NUQ8 709 aa11.54□□□□□ -0.56
RPL28-201ENST00000344063 PRPSAP2O60256 369 aa11.54□□□□□ -0.56
RPL28-201ENST00000344063 SNUPNO95149 360 aaKnown RBP11.54□□□□□ -0.56
RPL28-201ENST00000344063 FDX1P10109 184 aa11.54□□□□□ -0.56
RPL28-201ENST00000344063 COMTP21964 271 aa11.54□□□□□ -0.56
RPL28-201ENST00000344063 GNA15P30679 374 aa11.54□□□□□ -0.56
RPL28-201ENST00000344063 SNRPFP62306 86 aaKnown RBP11.54□□□□□ -0.56
RPL28-201ENST00000344063 TFDP2Q14188 446 aa11.54□□□□□ -0.56
RPL28-201ENST00000344063 NCAPG2Q86XI2 1143 aa11.54□□□□□ -0.56
RPL28-201ENST00000344063 ANKMY2Q8IV38 441 aa11.54□□□□□ -0.56
RPL28-201ENST00000344063 AGAP11Q8TF27 550 aa11.54□□□□□ -0.56
RPL28-201ENST00000344063 C18orf8Q96DM3 657 aa11.54□□□□□ -0.56
RPL28-201ENST00000344063 FOXP3Q9BZS1 431 aa11.54□□□□□ -0.56
RPL28-201ENST00000344063 PABPC3Q9H361 631 aaKnown RBP11.54□□□□□ -0.56
RPL28-201ENST00000344063 KDM4CQ9H3R0 1056 aa11.54□□□□□ -0.56
RPL28-201ENST00000344063 MAGED2Q9UNF1 606 aaPredicted RBP11.54□□□□□ -0.56
RPL28-201ENST00000344063 GTPBP10A4D1E9 387 aaKnown RBP11.54□□□□□ -0.56
RPL28-201ENST00000344063 ALDH5A1P51649 535 aaPredicted RBP11.54□□□□□ -0.56
RPL28-201ENST00000344063 KCNMA1Q12791 1236 aa11.54□□□□□ -0.56
RPL28-201ENST00000344063 ACCSLQ4AC99 568 aa11.54□□□□□ -0.56
RPL28-201ENST00000344063 ATG16L1Q676U5 607 aa11.54□□□□□ -0.56
RPL28-201ENST00000344063 WDR59Q6PJI9 974 aa11.54□□□□□ -0.56
RPL28-201ENST00000344063 RTKN2Q8IZC4 609 aa11.54□□□□□ -0.56
RPL28-201ENST00000344063 RAVER2Q9HCJ3 691 aaKnown RBP11.54□□□□□ -0.56
RPL28-201ENST00000344063 KLHL11Q9NVR0 708 aa11.54□□□□□ -0.56
RPL28-201ENST00000344063 KLRC4O43908 158 aa11.53□□□□□ -0.56
RPL28-201ENST00000344063 ENO1P06733 434 aaKnown RBP11.53□□□□□ -0.56
RPL28-201ENST00000344063 OVGP1Q12889 678 aa11.53□□□□□ -0.56
RPL28-201ENST00000344063 SYCP2LQ5T4T6 812 aa11.53□□□□□ -0.56
RPL28-201ENST00000344063 ZBTB33Q86T24 672 aa11.53□□□□□ -0.56
RPL28-201ENST00000344063 RASSF3Q86WH2 238 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms