RNA–Protein interactions for RNA: ENST00000342631.7

SNED1-202, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 1 (best) BASIC

Gene SNED1, Length 1,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-202ENST00000342631 RALGAPA2Q2PPJ7 1873 aa17.73■□□□□ 0.43
SNED1-202ENST00000342631 TRIM43BA6NCK2 446 aa17.72■□□□□ 0.43
SNED1-202ENST00000342631 LRRIQ3A6PVS8 624 aaPredicted RBP17.72■□□□□ 0.43
SNED1-202ENST00000342631 PFKMP08237 780 aa17.72■□□□□ 0.43
SNED1-202ENST00000342631 FMO5P49326 533 aa17.72■□□□□ 0.43
SNED1-202ENST00000342631 SLC10A6Q3KNW5 377 aa17.72■□□□□ 0.43
SNED1-202ENST00000342631 MFSD5Q6N075 450 aa17.72■□□□□ 0.43
SNED1-202ENST00000342631 TMEM199Q8N511 208 aa17.72■□□□□ 0.43
SNED1-202ENST00000342631 SMG8Q8ND04 991 aaKnown RBP17.72■□□□□ 0.43
SNED1-202ENST00000342631 DBF4BQ8NFT6 615 aa17.72■□□□□ 0.43
SNED1-202ENST00000342631 PLEKHO2Q8TD55 490 aa17.72■□□□□ 0.43
SNED1-202ENST00000342631 TRIM43Q96BQ3 446 aaPredicted RBP17.72■□□□□ 0.43
SNED1-202ENST00000342631 SCLYQ96I15 445 aa17.72■□□□□ 0.43
SNED1-202ENST00000342631 ERGIC2Q96RQ1 377 aa17.72■□□□□ 0.43
SNED1-202ENST00000342631 NXF3Q9H4D5 531 aaKnown RBP17.72■□□□□ 0.43
SNED1-202ENST00000342631 PDE11AQ9HCR9 933 aa17.72■□□□□ 0.43
SNED1-202ENST00000342631 UBN1Q9NPG3 1134 aa17.72■□□□□ 0.43
SNED1-202ENST00000342631 SNTG2Q9NY99 539 aa17.72■□□□□ 0.43
SNED1-202ENST00000342631 DERAQ9Y315 318 aa17.72■□□□□ 0.43
SNED1-202ENST00000342631 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.72■□□□□ 0.43
SNED1-202ENST00000342631 ANK1P16157 1881 aa17.72■□□□□ 0.43
SNED1-202ENST00000342631 MGEA5O60502 916 aa17.72■□□□□ 0.43
SNED1-202ENST00000342631 EOMESO95936 686 aa17.72■□□□□ 0.43
SNED1-202ENST00000342631 CXCL8P10145 99 aa17.72■□□□□ 0.43
SNED1-202ENST00000342631 DLATP10515 647 aaKnown RBP17.72■□□□□ 0.43
SNED1-202ENST00000342631 TNNI1P19237 187 aa17.72■□□□□ 0.43
SNED1-202ENST00000342631 DLG4P78352 724 aa17.72■□□□□ 0.43
SNED1-202ENST00000342631 C1orf220Q5T0J3 134 aa17.72■□□□□ 0.43
SNED1-202ENST00000342631 TMEM192Q8IY95 271 aa17.72■□□□□ 0.43
SNED1-202ENST00000342631 RPUSD2Q8IZ73 545 aaKnown RBP17.72■□□□□ 0.43
SNED1-202ENST00000342631 TMEM8AQ9HCN3 771 aa17.72■□□□□ 0.43
SNED1-202ENST00000342631 INTS13Q9NVM9 706 aa17.72■□□□□ 0.43
SNED1-202ENST00000342631 C2CD2Q9Y426 696 aa17.72■□□□□ 0.43
SNED1-202ENST00000342631 ALPK3Q96L96 1907 aa17.71■□□□□ 0.43
SNED1-202ENST00000342631 RECQL4O94761 1208 aa17.71■□□□□ 0.43
SNED1-202ENST00000342631 TRIM49P0CI25 452 aa17.71■□□□□ 0.43
SNED1-202ENST00000342631 TRIM49CP0CI26 452 aa17.71■□□□□ 0.43
SNED1-202ENST00000342631 ITGA4P13612 1032 aa17.71■□□□□ 0.43
SNED1-202ENST00000342631 FAM189BP81408 668 aa17.71■□□□□ 0.43
SNED1-202ENST00000342631 KRT39Q6A163 491 aa17.71■□□□□ 0.43
SNED1-202ENST00000342631 CNKSR3Q6P9H4 555 aa17.71■□□□□ 0.43
SNED1-202ENST00000342631 CACTINQ8WUQ7 758 aaKnown RBP17.71■□□□□ 0.43
SNED1-202ENST00000342631 SNX27Q96L92 541 aa17.71■□□□□ 0.43
SNED1-202ENST00000342631 GIT1Q9Y2X7 761 aa17.71■□□□□ 0.43
SNED1-202ENST00000342631 SCN5AQ14524 2016 aa17.71■□□□□ 0.43
SNED1-202ENST00000342631 LACTBL1A8MY62 500 aa17.7■□□□□ 0.42
SNED1-202ENST00000342631 C9IYK1 514 aa17.7■□□□□ 0.42
SNED1-202ENST00000342631 TEX33O43247 280 aa17.7■□□□□ 0.42
SNED1-202ENST00000342631 PBX1P40424 430 aa17.7■□□□□ 0.42
SNED1-202ENST00000342631 MXI1P50539 228 aa17.7■□□□□ 0.42
SNED1-202ENST00000342631 DUOXA2Q1HG44 320 aa17.7■□□□□ 0.42
SNED1-202ENST00000342631 XKR4Q5GH76 650 aa17.7■□□□□ 0.42
SNED1-202ENST00000342631 ALKAL1Q6UXT8 129 aa17.7■□□□□ 0.42
SNED1-202ENST00000342631 IQCDQ96DY2 449 aa17.7■□□□□ 0.42
SNED1-202ENST00000342631 ELAC1Q9H777 363 aaKnown RBP17.7■□□□□ 0.42
SNED1-202ENST00000342631 CNTN3Q9P232 1028 aa17.7■□□□□ 0.42
SNED1-202ENST00000342631 ITIH6Q6UXX5 1313 aa17.7■□□□□ 0.42
SNED1-202ENST00000342631 PPP3CAQ08209 521 aa17.7■□□□□ 0.42
SNED1-202ENST00000342631 GBP6Q6ZN66 633 aa17.7■□□□□ 0.42
SNED1-202ENST00000342631 ECHDC2Q86YB7 292 aa17.7■□□□□ 0.42
SNED1-202ENST00000342631 VSTM4Q8IW00 320 aa17.7■□□□□ 0.42
SNED1-202ENST00000342631 FAM212AQ96EL1 285 aa17.7■□□□□ 0.42
SNED1-202ENST00000342631 PARP2Q9UGN5 583 aa17.7■□□□□ 0.42
SNED1-202ENST00000342631 COQ4Q9Y3A0 265 aa17.7■□□□□ 0.42
SNED1-202ENST00000342631 HES2Q9Y543 173 aa17.7■□□□□ 0.42
SNED1-202ENST00000342631 ENPP3O14638 875 aa17.69■□□□□ 0.42
SNED1-202ENST00000342631 EFCAB14O75071 495 aa17.69■□□□□ 0.42
SNED1-202ENST00000342631 KCNE1P15382 129 aa17.69■□□□□ 0.42
SNED1-202ENST00000342631 GCLMP48507 274 aa17.69■□□□□ 0.42
SNED1-202ENST00000342631 MYL7Q01449 175 aa17.69■□□□□ 0.42
SNED1-202ENST00000342631 C15orf39Q6ZRI6 1047 aa17.69■□□□□ 0.42
SNED1-202ENST00000342631 RTN4RL1Q86UN2 441 aaPredicted RBP17.69■□□□□ 0.42
SNED1-202ENST00000342631 RSPH1Q8WYR4 309 aa17.69■□□□□ 0.42
SNED1-202ENST00000342631 ANKRD36BP1Q96IX9 119 aa17.69■□□□□ 0.42
SNED1-202ENST00000342631 POP1Q99575 1024 aaKnown RBP17.69■□□□□ 0.42
SNED1-202ENST00000342631 TMEM117Q9H0C3 514 aa17.69■□□□□ 0.42
SNED1-202ENST00000342631 XPOTO43592 962 aaKnown RBP17.68■□□□□ 0.42
SNED1-202ENST00000342631 WNT7BP56706 349 aa17.68■□□□□ 0.42
SNED1-202ENST00000342631 IKBKEQ14164 716 aa17.68■□□□□ 0.42
SNED1-202ENST00000342631 TMEM132DQ14C87 1099 aa17.68■□□□□ 0.42
SNED1-202ENST00000342631 EXOC3L4Q17RC7 722 aa17.68■□□□□ 0.42
SNED1-202ENST00000342631 ZACNQ401N2 412 aa17.68■□□□□ 0.42
SNED1-202ENST00000342631 CBWD6Q4V339 395 aa17.68■□□□□ 0.42
SNED1-202ENST00000342631 CBWD3Q5JTY5 395 aa17.68■□□□□ 0.42
SNED1-202ENST00000342631 CBWD5Q5RIA9 395 aa17.68■□□□□ 0.42
SNED1-202ENST00000342631 SPECC1LQ69YQ0 1117 aa17.68■□□□□ 0.42
SNED1-202ENST00000342631 SV2AQ7L0J3 742 aa17.68■□□□□ 0.42
SNED1-202ENST00000342631 DEFB128Q7Z7B8 93 aa17.68■□□□□ 0.42
SNED1-202ENST00000342631 ZNF598Q86UK7 904 aaKnown RBP17.68■□□□□ 0.42
SNED1-202ENST00000342631 TET1Q8NFU7 2136 aa17.68■□□□□ 0.42
SNED1-202ENST00000342631 LINC01599Q8WXQ3 324 aa17.68■□□□□ 0.42
SNED1-202ENST00000342631 RNF39Q9H2S5 420 aa17.68■□□□□ 0.42
SNED1-202ENST00000342631 TMEM161AQ9NX61 479 aa17.68■□□□□ 0.42
SNED1-202ENST00000342631 ABHD14A-ACY1A0A1B0GW23 586 aa17.68■□□□□ 0.42
SNED1-202ENST00000342631 CCDC85CA6NKD9 419 aa17.68■□□□□ 0.42
SNED1-202ENST00000342631 MEFVO15553 781 aaPredicted RBP17.68■□□□□ 0.42
SNED1-202ENST00000342631 TNNC2P02585 160 aa17.68■□□□□ 0.42
SNED1-202ENST00000342631 C4BPAP04003 597 aaKnown RBP17.68■□□□□ 0.42
SNED1-202ENST00000342631 TMEM191BP0C7N4 346 aa17.68■□□□□ 0.42
SNED1-202ENST00000342631 AKAP5P24588 427 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms