RNA–Protein interactions for RNA: ENST00000341060.3

TDP2-201, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TDP2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-201ENST00000341060 COILP38432 576 aaPredicted RBP15.61■□□□□ 0.09
TDP2-201ENST00000341060 RWDD2BP57060 319 aa15.61■□□□□ 0.09
TDP2-201ENST00000341060 BYSLQ13895 437 aaKnown RBP15.61■□□□□ 0.09
TDP2-201ENST00000341060 ACAD10Q6JQN1 1059 aa15.61■□□□□ 0.09
TDP2-201ENST00000341060 SV2AQ7L0J3 742 aa15.61■□□□□ 0.09
TDP2-201ENST00000341060 ARMC9Q7Z3E5 817 aa15.61■□□□□ 0.09
TDP2-201ENST00000341060 NLRX1Q86UT6 975 aa15.61■□□□□ 0.09
TDP2-201ENST00000341060 CPNE8Q86YQ8 564 aa15.61■□□□□ 0.09
TDP2-201ENST00000341060 ADGRA3Q8IWK6 1321 aa15.61■□□□□ 0.09
TDP2-201ENST00000341060 GPD1LQ8N335 351 aa15.61■□□□□ 0.09
TDP2-201ENST00000341060 OTUD6BQ8N6M0 293 aa15.61■□□□□ 0.09
TDP2-201ENST00000341060 RNF25Q96BH1 459 aaPredicted RBP15.61■□□□□ 0.09
TDP2-201ENST00000341060 FAM129AQ9BZQ8 928 aa15.61■□□□□ 0.09
TDP2-201ENST00000341060 CNOT7Q9UIV1 285 aaKnown RBP15.61■□□□□ 0.09
TDP2-201ENST00000341060 LOC285556D6RIA3 1793 aa15.6■□□□□ 0.09
TDP2-201ENST00000341060 HNRNPDLO14979 420 aaKnown RBP15.6■□□□□ 0.09
TDP2-201ENST00000341060 ZNF862O60290 1169 aa15.6■□□□□ 0.09
TDP2-201ENST00000341060 ZC3H11AO75152 810 aaKnown RBP eCLIP15.6■□□□□ 0.09
TDP2-201ENST00000341060 CCND2P30279 289 aa15.6■□□□□ 0.09
TDP2-201ENST00000341060 CDR1P51861 262 aa15.6■□□□□ 0.09
TDP2-201ENST00000341060 RTP1P59025 263 aa15.6■□□□□ 0.09
TDP2-201ENST00000341060 BRDTQ58F21 947 aaPredicted RBP15.6■□□□□ 0.09
TDP2-201ENST00000341060 C6orf89Q6UWU4 347 aa15.6■□□□□ 0.09
TDP2-201ENST00000341060 CYFIP1Q7L576 1253 aa15.6■□□□□ 0.09
TDP2-201ENST00000341060 ENOSF1Q7L5Y1 443 aa15.6■□□□□ 0.09
TDP2-201ENST00000341060 VSIG10LQ86VR7 867 aa15.6■□□□□ 0.09
TDP2-201ENST00000341060 CCDC105Q8IYK2 499 aa15.6■□□□□ 0.09
TDP2-201ENST00000341060 DHX38Q92620 1227 aaKnown RBP15.6■□□□□ 0.09
TDP2-201ENST00000341060 ATP6V0A1Q93050 837 aa15.6■□□□□ 0.09
TDP2-201ENST00000341060 CEP170P1Q96L14 293 aa15.6■□□□□ 0.09
TDP2-201ENST00000341060 PLVAPQ9BX97 442 aa15.6■□□□□ 0.09
TDP2-201ENST00000341060 PASKQ96RG2 1323 aa15.59■□□□□ 0.09
TDP2-201ENST00000341060 FSBPO95073 299 aa15.59■□□□□ 0.09
TDP2-201ENST00000341060 STBD1O95210 358 aa15.59■□□□□ 0.09
TDP2-201ENST00000341060 RARAP10276 462 aa15.59■□□□□ 0.09
TDP2-201ENST00000341060 GARTP22102 1010 aa15.59■□□□□ 0.09
TDP2-201ENST00000341060 SOX10P56693 466 aa15.59■□□□□ 0.09
TDP2-201ENST00000341060 SLC29A2Q14542 456 aa15.59■□□□□ 0.09
TDP2-201ENST00000341060 CLEC16AQ2KHT3 1053 aa15.59■□□□□ 0.09
TDP2-201ENST00000341060 PSPC1Q8WXF1 523 aaKnown RBP15.59■□□□□ 0.09
TDP2-201ENST00000341060 RAPGEF5Q92565 580 aa15.59■□□□□ 0.09
TDP2-201ENST00000341060 SLCO2A1Q92959 643 aa15.59■□□□□ 0.09
TDP2-201ENST00000341060 ART4Q93070 314 aa15.59■□□□□ 0.09
TDP2-201ENST00000341060 TATDN2Q93075 761 aa15.59■□□□□ 0.09
TDP2-201ENST00000341060 LRRC19Q9H756 370 aa15.59■□□□□ 0.09
TDP2-201ENST00000341060 RNF146Q9NTX7 359 aa15.59■□□□□ 0.09
TDP2-201ENST00000341060 GABBR1Q9UBS5 961 aa15.59■□□□□ 0.09
TDP2-201ENST00000341060 C5orf60A6NFR6 353 aa15.59■□□□□ 0.09
TDP2-201ENST00000341060 DKC1O60832 514 aaKnown RBP eCLIP15.59■□□□□ 0.09
TDP2-201ENST00000341060 DGAT1O75907 488 aa15.59■□□□□ 0.09
TDP2-201ENST00000341060 NR3C2P08235 984 aa15.59■□□□□ 0.09
TDP2-201ENST00000341060 DLATP10515 647 aaKnown RBP15.59■□□□□ 0.09
TDP2-201ENST00000341060 BAATQ14032 418 aaPredicted RBP15.59■□□□□ 0.09
TDP2-201ENST00000341060 SLMAPQ14BN4 828 aa15.59■□□□□ 0.09
TDP2-201ENST00000341060 CIAPIN1Q6FI81 312 aa15.59■□□□□ 0.09
TDP2-201ENST00000341060 CROCCP2Q86T23 111 aa15.59■□□□□ 0.09
TDP2-201ENST00000341060 MCPH1Q8NEM0 835 aa15.59■□□□□ 0.09
TDP2-201ENST00000341060 KAT2BQ92831 832 aa15.59■□□□□ 0.09
TDP2-201ENST00000341060 CENPTQ96BT3 561 aa15.59■□□□□ 0.09
TDP2-201ENST00000341060 WNK4Q96J92 1243 aa15.59■□□□□ 0.09
TDP2-201ENST00000341060 FAM81BQ96LP2 452 aa15.59■□□□□ 0.09
TDP2-201ENST00000341060 SEMA4AQ9H3S1 761 aa15.59■□□□□ 0.09
TDP2-201ENST00000341060 PDLIM7Q9NR12 457 aa15.59■□□□□ 0.09
TDP2-201ENST00000341060 RIPK3Q9Y572 518 aa15.59■□□□□ 0.09
TDP2-201ENST00000341060 TULP1O00294 542 aaPredicted RBP15.58■□□□□ 0.08
TDP2-201ENST00000341060 UNGP13051 313 aaPredicted RBP15.58■□□□□ 0.08
TDP2-201ENST00000341060 KCNA2P16389 499 aa15.58■□□□□ 0.08
TDP2-201ENST00000341060 C15orf39Q6ZRI6 1047 aa15.58■□□□□ 0.08
TDP2-201ENST00000341060 JDP2Q8WYK2 163 aa15.58■□□□□ 0.08
TDP2-201ENST00000341060 ATG4CQ96DT6 458 aa15.58■□□□□ 0.08
TDP2-201ENST00000341060 EFCC1Q9HA90 598 aa15.58■□□□□ 0.08
TDP2-201ENST00000341060 DDX20Q9UHI6 824 aaKnown RBP15.58■□□□□ 0.08
TDP2-201ENST00000341060 PTPN22Q9Y2R2 807 aa15.58■□□□□ 0.08
TDP2-201ENST00000341060 FSCN2O14926 492 aa15.58■□□□□ 0.08
TDP2-201ENST00000341060 RARGP13631 454 aa15.58■□□□□ 0.08
TDP2-201ENST00000341060 KRT5P13647 590 aa15.58■□□□□ 0.08
TDP2-201ENST00000341060 MMP13P45452 471 aa15.58■□□□□ 0.08
TDP2-201ENST00000341060 PPARDQ03181 441 aa15.58■□□□□ 0.08
TDP2-201ENST00000341060 ADCY2Q08462 1091 aa15.58■□□□□ 0.08
TDP2-201ENST00000341060 TMEM109Q9BVC6 243 aa15.58■□□□□ 0.08
TDP2-201ENST00000341060 XPNPEP1Q9NQW7 623 aa15.58■□□□□ 0.08
TDP2-201ENST00000341060 C1orf112Q9NSG2 853 aa15.58■□□□□ 0.08
TDP2-201ENST00000341060 ARHGAP28Q9P2N2 729 aa15.58■□□□□ 0.08
TDP2-201ENST00000341060 ANAPC7Q9UJX3 599 aa15.58■□□□□ 0.08
TDP2-201ENST00000341060 RIPK2O43353 540 aa15.57■□□□□ 0.08
TDP2-201ENST00000341060 ECEL1O95672 775 aa15.57■□□□□ 0.08
TDP2-201ENST00000341060 EGFRP00533 1210 aa15.57■□□□□ 0.08
TDP2-201ENST00000341060 PSAPP07602 524 aa15.57■□□□□ 0.08
TDP2-201ENST00000341060 ABCD1P33897 745 aa15.57■□□□□ 0.08
TDP2-201ENST00000341060 CLDN10P78369 228 aa15.57■□□□□ 0.08
TDP2-201ENST00000341060 IFT88Q13099 833 aa15.57■□□□□ 0.08
TDP2-201ENST00000341060 QPCTQ16769 361 aa15.57■□□□□ 0.08
TDP2-201ENST00000341060 ERMARDQ5T6L9 678 aa15.57■□□□□ 0.08
TDP2-201ENST00000341060 TAS1R3Q7RTX0 852 aa15.57■□□□□ 0.08
TDP2-201ENST00000341060 ZNF677Q86XU0 584 aa15.57■□□□□ 0.08
TDP2-201ENST00000341060 ELMO3Q96BJ8 720 aa15.57■□□□□ 0.08
TDP2-201ENST00000341060 PI4K2AQ9BTU6 479 aa15.57■□□□□ 0.08
TDP2-201ENST00000341060 AVENQ9NQS1 362 aaPredicted RBP15.57■□□□□ 0.08
TDP2-201ENST00000341060 H0YCG3 227 aa15.56■□□□□ 0.08
TDP2-201ENST00000341060 CLDN3O15551 220 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms