RNA–Protein interactions for RNA: ENST00000340748.8

DNMT1-201, Transcript of DNA methyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DNMT1, Length 5,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-201ENST00000340748 FMR1Q06787 632 aaKnown RBP eCLIP13.62□□□□□ -0.238e-7■■■□□ 18.6
DNMT1-201ENST00000340748 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.62□□□□□ -0.23
DNMT1-201ENST00000340748 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.62□□□□□ -0.23
DNMT1-201ENST00000340748 SNF8Q96H20 258 aa13.62□□□□□ -0.23
DNMT1-201ENST00000340748 SERPINI1Q99574 410 aa13.62□□□□□ -0.23
DNMT1-201ENST00000340748 MTG1Q9BT17 334 aaPredicted RBP13.62□□□□□ -0.23
DNMT1-201ENST00000340748 RBAKQ9NYW8 714 aaPredicted RBP13.62□□□□□ -0.23
DNMT1-201ENST00000340748 ANGPTL2Q9UKU9 493 aa13.62□□□□□ -0.23
DNMT1-201ENST00000340748 AGO2Q9UKV8 859 aaKnown RBP13.62□□□□□ -0.23
DNMT1-201ENST00000340748 FAM205AQ6ZU69 1335 aa13.62□□□□□ -0.23
DNMT1-201ENST00000340748 F8W8V4 182 aa13.62□□□□□ -0.23
DNMT1-201ENST00000340748 FOXP2O15409 715 aa13.62□□□□□ -0.23
DNMT1-201ENST00000340748 SDC4P31431 198 aa13.62□□□□□ -0.23
DNMT1-201ENST00000340748 PPARGP37231 505 aaPredicted RBP13.62□□□□□ -0.23
DNMT1-201ENST00000340748 HSP90AA5PQ58FG0 334 aa13.62□□□□□ -0.23
DNMT1-201ENST00000340748 PPP6R3Q5H9R7 873 aaPredicted RBP13.62□□□□□ -0.23
DNMT1-201ENST00000340748 RASGRP2Q7LDG7 609 aa13.62□□□□□ -0.23
DNMT1-201ENST00000340748 SAAL1Q96ER3 474 aa13.62□□□□□ -0.23
DNMT1-201ENST00000340748 RTFDC1Q9BY42 306 aaPredicted RBP13.62□□□□□ -0.23
DNMT1-201ENST00000340748 DNAJC17Q9NVM6 304 aaKnown RBP13.62□□□□□ -0.23
DNMT1-201ENST00000340748 M0QYV0 167 aa13.62□□□□□ -0.23
DNMT1-201ENST00000340748 ATP5HO75947 161 aa13.62□□□□□ -0.23
DNMT1-201ENST00000340748 ESRRAP11474 423 aaPredicted RBP13.62□□□□□ -0.23
DNMT1-201ENST00000340748 TAC1P20366 129 aa13.62□□□□□ -0.23
DNMT1-201ENST00000340748 TAAR1Q96RJ0 339 aa13.62□□□□□ -0.23
DNMT1-201ENST00000340748 PARVAQ9NVD7 372 aa13.62□□□□□ -0.23
DNMT1-201ENST00000340748 HDAC6Q9UBN7 1215 aa13.62□□□□□ -0.23
DNMT1-201ENST00000340748 PPP1R9AQ9ULJ8 1098 aa13.62□□□□□ -0.23
DNMT1-201ENST00000340748 RASA4BC9J798 803 aa13.62□□□□□ -0.23
DNMT1-201ENST00000340748 RASA4O43374 803 aa13.62□□□□□ -0.23
DNMT1-201ENST00000340748 ICAM1P05362 532 aa13.62□□□□□ -0.23
DNMT1-201ENST00000340748 RPS6P62753 249 aaKnown RBP13.62□□□□□ -0.23
DNMT1-201ENST00000340748 PPP2R2AP63151 447 aa13.62□□□□□ -0.23
DNMT1-201ENST00000340748 MRPS25P82663 173 aaKnown RBP13.62□□□□□ -0.23
DNMT1-201ENST00000340748 VPS39Q96JC1 886 aa13.62□□□□□ -0.23
DNMT1-201ENST00000340748 TRIM55Q9BYV6 548 aa13.62□□□□□ -0.23
DNMT1-201ENST00000340748 CNTNAP5Q8WYK1 1306 aa13.62□□□□□ -0.23
DNMT1-201ENST00000340748 COL14A1Q05707 1796 aaKnown RBP13.62□□□□□ -0.23
DNMT1-201ENST00000340748 AMHP03971 560 aa13.61□□□□□ -0.23
DNMT1-201ENST00000340748 FDPSP14324 419 aaKnown RBP13.61□□□□□ -0.23
DNMT1-201ENST00000340748 GRK4P32298 578 aa13.61□□□□□ -0.23
DNMT1-201ENST00000340748 ZNF449Q6P9G9 518 aa13.61□□□□□ -0.23
DNMT1-201ENST00000340748 EPM2AIP1Q7L775 607 aaPredicted RBP13.61□□□□□ -0.23
DNMT1-201ENST00000340748 STK33Q9BYT3 514 aa13.61□□□□□ -0.23
DNMT1-201ENST00000340748 FAM205CA6NFA0 338 aa13.61□□□□□ -0.23
DNMT1-201ENST00000340748 NKRFO15226 690 aaKnown RBP eCLIP13.61□□□□□ -0.23
DNMT1-201ENST00000340748 TRIM49P0CI25 452 aa13.61□□□□□ -0.23
DNMT1-201ENST00000340748 TRIM49CP0CI26 452 aa13.61□□□□□ -0.23
DNMT1-201ENST00000340748 DSG3P32926 999 aa13.61□□□□□ -0.23
DNMT1-201ENST00000340748 PSMC1P62191 440 aaKnown RBP13.61□□□□□ -0.23
DNMT1-201ENST00000340748 EDRF1Q3B7T1 1238 aa13.61□□□□□ -0.23
DNMT1-201ENST00000340748 AFG1LQ8WV93 481 aa13.61□□□□□ -0.23
DNMT1-201ENST00000340748 KCNB2Q92953 911 aa13.61□□□□□ -0.23
DNMT1-201ENST00000340748 GAS2L1Q99501 681 aaPredicted RBP13.61□□□□□ -0.23
DNMT1-201ENST00000340748 STAP1Q9ULZ2 295 aa13.61□□□□□ -0.23
DNMT1-201ENST00000340748 WDR91A4D1P6 747 aa13.61□□□□□ -0.23
DNMT1-201ENST00000340748 PDCLQ13371 301 aa13.61□□□□□ -0.23
DNMT1-201ENST00000340748 A0A1W2PQJ5 194 aa13.61□□□□□ -0.23
DNMT1-201ENST00000340748 CYP2C19P33261 490 aa13.61□□□□□ -0.23
DNMT1-201ENST00000340748 SLC18A3Q16572 532 aa13.61□□□□□ -0.23
DNMT1-201ENST00000340748 FKBP1CQ5VVH2 108 aa13.61□□□□□ -0.23
DNMT1-201ENST00000340748 TMEM60Q9H2L4 133 aa13.61□□□□□ -0.23
DNMT1-201ENST00000340748 KCNF1Q9H3M0 494 aa13.61□□□□□ -0.23
DNMT1-201ENST00000340748 SNX12Q9UMY4 172 aa13.61□□□□□ -0.23
DNMT1-201ENST00000340748 FNDC3AQ9Y2H6 1198 aaKnown RBP13.61□□□□□ -0.23
DNMT1-201ENST00000340748 ZNF211Q13398 564 aaPredicted RBP13.61□□□□□ -0.23
DNMT1-201ENST00000340748 DUOXA2Q1HG44 320 aa13.61□□□□□ -0.23
DNMT1-201ENST00000340748 RWDD4Q6NW29 188 aaKnown RBP13.61□□□□□ -0.23
DNMT1-201ENST00000340748 SYDE1Q6ZW31 735 aaPredicted RBP13.61□□□□□ -0.23
DNMT1-201ENST00000340748 CDKL3Q8IVW4 592 aaPredicted RBP13.61□□□□□ -0.23
DNMT1-201ENST00000340748 ELAC2Q9BQ52 826 aaKnown RBP13.61□□□□□ -0.23
DNMT1-201ENST00000340748 DDX47Q9H0S4 455 aaKnown RBP13.61□□□□□ -0.23
DNMT1-201ENST00000340748 TRPC7Q9HCX4 862 aa13.61□□□□□ -0.23
DNMT1-201ENST00000340748 KLHL8Q9P2G9 620 aaPredicted RBP13.61□□□□□ -0.23
DNMT1-201ENST00000340748 PCDHB12Q9Y5F1 795 aa13.61□□□□□ -0.23
DNMT1-201ENST00000340748 NWD1Q149M9 1564 aa13.6□□□□□ -0.23
DNMT1-201ENST00000340748 C2CD2LO14523 706 aa13.6□□□□□ -0.23
DNMT1-201ENST00000340748 HOXA2O43364 376 aa13.6□□□□□ -0.23
DNMT1-201ENST00000340748 CTDNEP1O95476 244 aa13.6□□□□□ -0.23
DNMT1-201ENST00000340748 PTPRAP18433 802 aa13.6□□□□□ -0.23
DNMT1-201ENST00000340748 CCDC137Q6PK04 289 aaKnown RBP13.6□□□□□ -0.23
DNMT1-201ENST00000340748 MAML1Q92585 1016 aa13.6□□□□□ -0.23
DNMT1-201ENST00000340748 RNF25Q96BH1 459 aaPredicted RBP13.6□□□□□ -0.23
DNMT1-201ENST00000340748 POLD4Q9HCU8 107 aa13.6□□□□□ -0.23
DNMT1-201ENST00000340748 LMNAP02545 664 aaKnown RBP13.6□□□□□ -0.23
DNMT1-201ENST00000340748 NMT1P30419 496 aaKnown RBP13.6□□□□□ -0.23
DNMT1-201ENST00000340748 SNRPFP62306 86 aaKnown RBP13.6□□□□□ -0.23
DNMT1-201ENST00000340748 WDR75Q8IWA0 830 aaKnown RBP13.6□□□□□ -0.23
DNMT1-201ENST00000340748 DAGLBQ8NCG7 672 aa13.6□□□□□ -0.23
DNMT1-201ENST00000340748 ATP6V1G3Q96LB4 118 aa13.6□□□□□ -0.23
DNMT1-201ENST00000340748 MORC2Q9Y6X9 1032 aaPredicted RBP13.6□□□□□ -0.23
DNMT1-201ENST00000340748 GPR182O15218 404 aa13.6□□□□□ -0.23
DNMT1-201ENST00000340748 HBP1O60381 514 aa13.6□□□□□ -0.23
DNMT1-201ENST00000340748 CHEK2O96017 543 aa13.6□□□□□ -0.23
DNMT1-201ENST00000340748 KRT14P02533 472 aa13.6□□□□□ -0.23
DNMT1-201ENST00000340748 PDHBP11177 359 aa13.6□□□□□ -0.23
DNMT1-201ENST00000340748 PRKAR2AP13861 404 aaKnown RBP13.6□□□□□ -0.23
DNMT1-201ENST00000340748 PAPOLAP51003 745 aaKnown RBP13.6□□□□□ -0.23
DNMT1-201ENST00000340748 FXR2P51116 673 aaKnown RBP eCLIP13.6□□□□□ -0.237e-7■■■□□ 18.6
DNMT1-201ENST00000340748 MAGOHP61326 146 aaKnown RBP13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms