RNA–Protein interactions for RNA: ENST00000340541.4

VAPA-201, Transcript of VAMP associated protein A, humanhuman

TSL 5 BASIC

Gene VAPA, Length 1,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-201ENST00000340541 STRN3Q13033 797 aa16.87■□□□□ 0.29
VAPA-201ENST00000340541 SMC1AQ14683 1233 aaKnown RBP16.87■□□□□ 0.29
VAPA-201ENST00000340541 NAB2Q15742 525 aa16.87■□□□□ 0.29
VAPA-201ENST00000340541 PLPP4Q5VZY2 271 aa16.87■□□□□ 0.29
VAPA-201ENST00000340541 RESP18Q5W5W9 173 aa16.87■□□□□ 0.29
VAPA-201ENST00000340541 MPZL3Q6UWV2 235 aa16.87■□□□□ 0.29
VAPA-201ENST00000340541 ZBTB33Q86T24 672 aa16.87■□□□□ 0.29
VAPA-201ENST00000340541 FAM193BQ96PV7 902 aaPredicted RBP16.87■□□□□ 0.29
VAPA-201ENST00000340541 HAPLN2Q9GZV7 340 aa16.87■□□□□ 0.29
VAPA-201ENST00000340541 ST6GALNAC4Q9H4F1 302 aa16.87■□□□□ 0.29
VAPA-201ENST00000340541 ZHX3Q9H4I2 956 aa16.87■□□□□ 0.29
VAPA-201ENST00000340541 TBX20Q9UMR3 447 aa16.87■□□□□ 0.29
VAPA-201ENST00000340541 GDAQ9Y2T3 454 aa16.87■□□□□ 0.29
VAPA-201ENST00000340541 FRMD3A2A2Y4 597 aa16.86■□□□□ 0.29
VAPA-201ENST00000340541 TMEM221A6NGB7 291 aa16.86■□□□□ 0.29
VAPA-201ENST00000340541 HIDE1A8MVS5 230 aa16.86■□□□□ 0.29
VAPA-201ENST00000340541 F8W810 466 aa16.86■□□□□ 0.29
VAPA-201ENST00000340541 K7ENM7 598 aa16.86■□□□□ 0.29
VAPA-201ENST00000340541 M0R296 226 aa16.86■□□□□ 0.29
VAPA-201ENST00000340541 MEFVO15553 781 aaPredicted RBP16.86■□□□□ 0.29
VAPA-201ENST00000340541 TOM1L1O75674 476 aa16.86■□□□□ 0.29
VAPA-201ENST00000340541 PIGRP01833 764 aa16.86■□□□□ 0.29
VAPA-201ENST00000340541 ALDH2P05091 517 aa16.86■□□□□ 0.29
VAPA-201ENST00000340541 SCP2P22307 547 aa16.86■□□□□ 0.29
VAPA-201ENST00000340541 GTF2BQ00403 316 aa16.86■□□□□ 0.29
VAPA-201ENST00000340541 NHLH1Q02575 133 aa16.86■□□□□ 0.29
VAPA-201ENST00000340541 TPRNQ4KMQ1 711 aa16.86■□□□□ 0.29
VAPA-201ENST00000340541 APBB1IPQ7Z5R6 666 aaPredicted RBP16.86■□□□□ 0.29
VAPA-201ENST00000340541 DDX53Q86TM3 631 aaKnown RBP16.86■□□□□ 0.29
VAPA-201ENST00000340541 SFR1Q86XK3 245 aa16.86■□□□□ 0.29
VAPA-201ENST00000340541 LEO1Q8WVC0 666 aaPredicted RBP16.86■□□□□ 0.29
VAPA-201ENST00000340541 CASP10Q92851 521 aa16.86■□□□□ 0.29
VAPA-201ENST00000340541 RPGRIP1Q96KN7 1286 aa16.86■□□□□ 0.29
VAPA-201ENST00000340541 STRA6Q9BX79 667 aa16.86■□□□□ 0.29
VAPA-201ENST00000340541 ZBP1Q9H171 429 aa16.86■□□□□ 0.29
VAPA-201ENST00000340541 KBTBD4Q9NVX7 518 aa16.86■□□□□ 0.29
VAPA-201ENST00000340541 FAN1Q9Y2M0 1017 aa16.86■□□□□ 0.29
VAPA-201ENST00000340541 TECTAO75443 2155 aa16.85■□□□□ 0.29
VAPA-201ENST00000340541 PPP1R37O75864 691 aa16.85■□□□□ 0.29
VAPA-201ENST00000340541 KRT85P78386 507 aa16.85■□□□□ 0.29
VAPA-201ENST00000340541 ITIH3Q06033 890 aa16.85■□□□□ 0.29
VAPA-201ENST00000340541 MCL1Q07820 350 aa16.85■□□□□ 0.29
VAPA-201ENST00000340541 SIGLEC14Q08ET2 396 aa16.85■□□□□ 0.29
VAPA-201ENST00000340541 ZC2HC1CQ53FD0 456 aaPredicted RBP16.85■□□□□ 0.29
VAPA-201ENST00000340541 XKR4Q5GH76 650 aa16.85■□□□□ 0.29
VAPA-201ENST00000340541 SLC39A4Q6P5W5 647 aa16.85■□□□□ 0.29
VAPA-201ENST00000340541 SYCE2Q6PIF2 218 aa16.85■□□□□ 0.29
VAPA-201ENST00000340541 ALKAL1Q6UXT8 129 aa16.85■□□□□ 0.29
VAPA-201ENST00000340541 ALYREFQ86V81 257 aaKnown RBP16.85■□□□□ 0.29
VAPA-201ENST00000340541 RNF168Q8IYW5 571 aaPredicted RBP16.85■□□□□ 0.29
VAPA-201ENST00000340541 VPS52Q8N1B4 723 aa16.85■□□□□ 0.29
VAPA-201ENST00000340541 STAMQ92783 540 aa16.85■□□□□ 0.29
VAPA-201ENST00000340541 PBXIP1Q96AQ6 731 aa16.85■□□□□ 0.29
VAPA-201ENST00000340541 DHX58Q96C10 678 aa16.85■□□□□ 0.29
VAPA-201ENST00000340541 RPS6KC1Q96S38 1066 aa16.85■□□□□ 0.29
VAPA-201ENST00000340541 TCHPQ9BT92 498 aa16.85■□□□□ 0.29
VAPA-201ENST00000340541 TNMDQ9H2S6 317 aa16.85■□□□□ 0.29
VAPA-201ENST00000340541 CUEDC2Q9H467 287 aa16.85■□□□□ 0.29
VAPA-201ENST00000340541 ANKFY1Q9P2R3 1169 aa16.85■□□□□ 0.29
VAPA-201ENST00000340541 CACNG4Q9UBN1 327 aa16.85■□□□□ 0.29
VAPA-201ENST00000340541 STK39Q9UEW8 545 aa16.85■□□□□ 0.29
VAPA-201ENST00000340541 PRG3Q9Y2Y8 225 aaPredicted RBP16.85■□□□□ 0.29
VAPA-201ENST00000340541 IRAK3Q9Y616 596 aa16.85■□□□□ 0.29
VAPA-201ENST00000340541 CITO14578 2027 aa16.85■□□□□ 0.29
VAPA-201ENST00000340541 ZNF318Q5VUA4 2279 aa16.85■□□□□ 0.29
VAPA-201ENST00000340541 C2orf71A6NGG8 1288 aa16.84■□□□□ 0.29
VAPA-201ENST00000340541 GAP43P17677 238 aa16.84■□□□□ 0.29
VAPA-201ENST00000340541 OR1G1P47890 313 aa16.84■□□□□ 0.29
VAPA-201ENST00000340541 OSTNP61366 133 aa16.84■□□□□ 0.29
VAPA-201ENST00000340541 RBM10P98175 930 aaKnown RBP16.84■□□□□ 0.29
VAPA-201ENST00000340541 TUSC3Q13454 348 aa16.84■□□□□ 0.29
VAPA-201ENST00000340541 NOLC1Q14978 699 aaKnown RBP eCLIP16.84■□□□□ 0.29
VAPA-201ENST00000340541 ZNF720Q7Z2F6 126 aa16.84■□□□□ 0.29
VAPA-201ENST00000340541 MAP4K3Q8IVH8 894 aa16.84■□□□□ 0.29
VAPA-201ENST00000340541 IQUBQ8NA54 791 aa16.84■□□□□ 0.29
VAPA-201ENST00000340541 NECTIN4Q96NY8 510 aa16.84■□□□□ 0.29
VAPA-201ENST00000340541 PPP1R10Q96QC0 940 aaKnown RBP16.84■□□□□ 0.29
VAPA-201ENST00000340541 PAAF1Q9BRP4 392 aa16.84■□□□□ 0.29
VAPA-201ENST00000340541 SEL1LQ9UBV2 794 aa16.84■□□□□ 0.29
VAPA-201ENST00000340541 NR2E1Q9Y466 385 aa16.84■□□□□ 0.29
VAPA-201ENST00000340541 PDCD11Q14690 1871 aaKnown RBP16.84■□□□□ 0.29
VAPA-201ENST00000340541 POLR2DO15514 142 aaKnown RBP16.83■□□□□ 0.28
VAPA-201ENST00000340541 FAM189A1O60320 539 aa16.83■□□□□ 0.28
VAPA-201ENST00000340541 CXCL14O95715 111 aa16.83■□□□□ 0.28
VAPA-201ENST00000340541 THP07101 528 aa16.83■□□□□ 0.28
VAPA-201ENST00000340541 CTSAP10619 480 aa16.83■□□□□ 0.28
VAPA-201ENST00000340541 SEZ6Q53EL9 994 aa16.83■□□□□ 0.28
VAPA-201ENST00000340541 GLRA4Q5JXX5 417 aa16.83■□□□□ 0.28
VAPA-201ENST00000340541 CES5AQ6NT32 575 aa16.83■□□□□ 0.28
VAPA-201ENST00000340541 CNNM4Q6P4Q7 775 aa16.83■□□□□ 0.28
VAPA-201ENST00000340541 SUGP1Q8IWZ8 645 aaKnown RBP16.83■□□□□ 0.28
VAPA-201ENST00000340541 FBXL6Q8N531 539 aa16.83■□□□□ 0.28
VAPA-201ENST00000340541 AUTS2Q8WXX7 1259 aa16.83■□□□□ 0.28
VAPA-201ENST00000340541 RABGGTAQ92696 567 aa16.83■□□□□ 0.28
VAPA-201ENST00000340541 SNX27Q96L92 541 aa16.83■□□□□ 0.28
VAPA-201ENST00000340541 SPATA32Q96LK8 384 aa16.83■□□□□ 0.28
VAPA-201ENST00000340541 ZMAT2Q96NC0 199 aaKnown RBP16.83■□□□□ 0.28
VAPA-201ENST00000340541 CCDC94Q9BW85 323 aaPredicted RBP16.83■□□□□ 0.28
VAPA-201ENST00000340541 TRIM9Q9C026 710 aa16.83■□□□□ 0.28
VAPA-201ENST00000340541 IKZF4Q9H2S9 585 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms