RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 PPM1LQ5SGD2 360 aa13.66□□□□□ -0.22
LIN54-201ENST00000340417 ARHGAP18Q8N392 663 aa13.66□□□□□ -0.22
LIN54-201ENST00000340417 CCDC110Q8TBZ0 833 aa13.66□□□□□ -0.22
LIN54-201ENST00000340417 ATP2A3Q93084 1043 aa13.66□□□□□ -0.22
LIN54-201ENST00000340417 RSAD1Q9HA92 442 aa13.66□□□□□ -0.22
LIN54-201ENST00000340417 AXLP30530 894 aa13.66□□□□□ -0.22
LIN54-201ENST00000340417 SULT1E1P49888 294 aa13.66□□□□□ -0.22
LIN54-201ENST00000340417 KRT31Q15323 416 aa13.66□□□□□ -0.22
LIN54-201ENST00000340417 AMHR2Q16671 573 aa13.66□□□□□ -0.22
LIN54-201ENST00000340417 FRMD5Q7Z6J6 570 aa13.66□□□□□ -0.22
LIN54-201ENST00000340417 RASAL3Q86YV0 1011 aa13.66□□□□□ -0.22
LIN54-201ENST00000340417 IFT20Q8IY31 132 aa13.66□□□□□ -0.22
LIN54-201ENST00000340417 SYT2Q8N9I0 419 aaPredicted RBP13.66□□□□□ -0.22
LIN54-201ENST00000340417 BRI3BPQ8WY22 251 aa13.66□□□□□ -0.22
LIN54-201ENST00000340417 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.66□□□□□ -0.22
LIN54-201ENST00000340417 DOLKQ9UPQ8 538 aa13.66□□□□□ -0.22
LIN54-201ENST00000340417 MYMKA6NI61 221 aa13.66□□□□□ -0.22
LIN54-201ENST00000340417 ATF2P15336 505 aa13.66□□□□□ -0.22
LIN54-201ENST00000340417 AVPR1AP37288 418 aa13.66□□□□□ -0.22
LIN54-201ENST00000340417 TUBB2AQ13885 445 aa13.66□□□□□ -0.22
LIN54-201ENST00000340417 MAP7D1Q3KQU3 841 aa13.66□□□□□ -0.22
LIN54-201ENST00000340417 MED15Q96RN5 788 aa13.66□□□□□ -0.22
LIN54-201ENST00000340417 MMTAG2Q9BU76 263 aaKnown RBP13.66□□□□□ -0.22
LIN54-201ENST00000340417 TUBB2BQ9BVA1 445 aa13.66□□□□□ -0.22
LIN54-201ENST00000340417 IPPQ9Y573 584 aa13.66□□□□□ -0.22
LIN54-201ENST00000340417 FAM200BP0CF97 657 aa13.65□□□□□ -0.22
LIN54-201ENST00000340417 MXRA7P84157 204 aa13.65□□□□□ -0.22
LIN54-201ENST00000340417 KCNA10Q16322 511 aa13.65□□□□□ -0.22
LIN54-201ENST00000340417 C11orf57Q6ZUT1 292 aaPredicted RBP13.65□□□□□ -0.22
LIN54-201ENST00000340417 PORCNQ9H237 461 aa13.65□□□□□ -0.22
LIN54-201ENST00000340417 CACYBPQ9HB71 228 aaKnown RBP13.65□□□□□ -0.22
LIN54-201ENST00000340417 HYOU1Q9Y4L1 999 aa13.65□□□□□ -0.22
LIN54-201ENST00000340417 TLL2Q9Y6L7 1015 aa13.65□□□□□ -0.22
LIN54-201ENST00000340417 SLC16A3O15427 465 aaKnown RBP13.65□□□□□ -0.22
LIN54-201ENST00000340417 ZBED1O96006 694 aa13.65□□□□□ -0.22
LIN54-201ENST00000340417 MBL2P11226 248 aaPredicted RBP13.65□□□□□ -0.22
LIN54-201ENST00000340417 ZBED6P86452 979 aa13.65□□□□□ -0.22
LIN54-201ENST00000340417 ZBTB16Q05516 673 aa13.65□□□□□ -0.22
LIN54-201ENST00000340417 EHHADHQ08426 723 aa13.65□□□□□ -0.22
LIN54-201ENST00000340417 THOC5Q13769 683 aaKnown RBP13.65□□□□□ -0.22
LIN54-201ENST00000340417 FAM171A1Q5VUB5 890 aa13.65□□□□□ -0.22
LIN54-201ENST00000340417 SNTG2Q9NY99 539 aa13.65□□□□□ -0.22
LIN54-201ENST00000340417 TTLL13PA6NNM8 815 aa13.65□□□□□ -0.22
LIN54-201ENST00000340417 EIF3DO15371 548 aaKnown RBP eCLIP13.65□□□□□ -0.22
LIN54-201ENST00000340417 PHBP35232 272 aa13.65□□□□□ -0.22
LIN54-201ENST00000340417 KPNA1P52294 538 aaPredicted RBP13.65□□□□□ -0.22
LIN54-201ENST00000340417 ZNF445P59923 1031 aa13.65□□□□□ -0.22
LIN54-201ENST00000340417 C10orf76Q5T2E6 689 aa13.65□□□□□ -0.22
LIN54-201ENST00000340417 NAA35Q5VZE5 725 aa13.65□□□□□ -0.22
LIN54-201ENST00000340417 GPT2Q8TD30 523 aa13.65□□□□□ -0.22
LIN54-201ENST00000340417 TRPV6Q9H1D0 765 aa13.65□□□□□ -0.22
LIN54-201ENST00000340417 NDUFV1P49821 464 aa13.65□□□□□ -0.22
LIN54-201ENST00000340417 SHC4Q6S5L8 630 aa13.65□□□□□ -0.22
LIN54-201ENST00000340417 PURBQ96QR8 312 aaKnown RBP13.65□□□□□ -0.22
LIN54-201ENST00000340417 C7orf25Q9BPX7 421 aa13.65□□□□□ -0.22
LIN54-201ENST00000340417 RUSC1Q9BVN2 902 aa13.65□□□□□ -0.22
LIN54-201ENST00000340417 SUDS3Q9H7L9 328 aaPredicted RBP13.65□□□□□ -0.22
LIN54-201ENST00000340417 UNCXA6NJT0 531 aa13.65□□□□□ -0.23
LIN54-201ENST00000340417 MED24O75448 989 aa13.65□□□□□ -0.23
LIN54-201ENST00000340417 DRAP1Q14919 205 aaPredicted RBP13.65□□□□□ -0.23
LIN54-201ENST00000340417 LLGL1Q15334 1064 aa13.65□□□□□ -0.23
LIN54-201ENST00000340417 PPP2R5EQ16537 467 aa13.65□□□□□ -0.23
LIN54-201ENST00000340417 TRIM72Q6ZMU5 477 aa13.65□□□□□ -0.23
LIN54-201ENST00000340417 UCMAQ8WVF2 138 aa13.65□□□□□ -0.23
LIN54-201ENST00000340417 MUC3BQ9H195 1237 aa13.65□□□□□ -0.23
LIN54-201ENST00000340417 THG1LQ9NWX6 298 aaKnown RBP13.65□□□□□ -0.23
LIN54-201ENST00000340417 NKIRAS1Q9NYS0 192 aa13.65□□□□□ -0.23
LIN54-201ENST00000340417 MAP3K13O43283 966 aa13.64□□□□□ -0.23
LIN54-201ENST00000340417 EIF4A3P38919 411 aaKnown RBP13.64□□□□□ -0.23
LIN54-201ENST00000340417 CDKL2Q92772 493 aa13.64□□□□□ -0.23
LIN54-201ENST00000340417 FAM107BQ9H098 131 aa13.64□□□□□ -0.23
LIN54-201ENST00000340417 NSRP1Q9H0G5 558 aaKnown RBP13.64□□□□□ -0.23
LIN54-201ENST00000340417 PLEKHA5Q9HAU0 1116 aa13.64□□□□□ -0.23
LIN54-201ENST00000340417 LCMT1Q9UIC8 334 aa13.64□□□□□ -0.23
LIN54-201ENST00000340417 ANAPC7Q9UJX3 599 aa13.64□□□□□ -0.23
LIN54-201ENST00000340417 GJB1P08034 283 aa13.64□□□□□ -0.23
LIN54-201ENST00000340417 CCL5P13501 91 aa13.64□□□□□ -0.23
LIN54-201ENST00000340417 SOX10P56693 466 aa13.64□□□□□ -0.23
LIN54-201ENST00000340417 RIN2Q8WYP3 895 aaPredicted RBP13.64□□□□□ -0.23
LIN54-201ENST00000340417 MYOM1P52179 1685 aa13.64□□□□□ -0.23
LIN54-201ENST00000340417 SEPT4O43236 478 aa13.64□□□□□ -0.23
LIN54-201ENST00000340417 NPTX2P47972 431 aa13.64□□□□□ -0.23
LIN54-201ENST00000340417 IFNAR2P48551 515 aa13.64□□□□□ -0.23
LIN54-201ENST00000340417 PTPN21Q16825 1174 aa13.64□□□□□ -0.23
LIN54-201ENST00000340417 SCYL1Q96KG9 808 aa13.64□□□□□ -0.23
LIN54-201ENST00000340417 IL25Q9H293 177 aa13.64□□□□□ -0.23
LIN54-201ENST00000340417 PDE11AQ9HCR9 933 aa13.64□□□□□ -0.23
LIN54-201ENST00000340417 ARFGAP3Q9NP61 516 aa13.64□□□□□ -0.23
LIN54-201ENST00000340417 ABCF3Q9NUQ8 709 aa13.64□□□□□ -0.23
LIN54-201ENST00000340417 CEP72Q9P209 647 aa13.64□□□□□ -0.23
LIN54-201ENST00000340417 SRRDQ9UH36 339 aa13.64□□□□□ -0.23
LIN54-201ENST00000340417 RPTORQ8N122 1335 aa13.64□□□□□ -0.23
LIN54-201ENST00000340417 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.64□□□□□ -0.23
LIN54-201ENST00000340417 AKAP5P24588 427 aa13.64□□□□□ -0.23
LIN54-201ENST00000340417 PMLP29590 882 aa13.64□□□□□ -0.23
LIN54-201ENST00000340417 SEMA3FQ13275 785 aa13.64□□□□□ -0.23
LIN54-201ENST00000340417 NOL9Q5SY16 702 aaKnown RBP13.64□□□□□ -0.23
LIN54-201ENST00000340417 SLC27A1Q6PCB7 646 aa13.64□□□□□ -0.23
LIN54-201ENST00000340417 VSIG10LQ86VR7 867 aa13.64□□□□□ -0.23
LIN54-201ENST00000340417 ANKS1AQ92625 1134 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms