RNA–Protein interactions for RNA: ENST00000339350.7

DFFB-202, Transcript of DNA fragmentation factor subunit beta, humanhuman

TSL 1 (best)

Gene DFFB, Length 3,005 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFB-202ENST00000339350 RSPH10BP0C881 870 aa13.43□□□□□ -0.26
DFFB-202ENST00000339350 ABCB4P21439 1286 aa13.43□□□□□ -0.26
DFFB-202ENST00000339350 CASP4P49662 377 aa13.43□□□□□ -0.26
DFFB-202ENST00000339350 PSMD7P51665 324 aa13.43□□□□□ -0.26
DFFB-202ENST00000339350 CACNB3P54284 484 aa13.43□□□□□ -0.26
DFFB-202ENST00000339350 PTK7Q13308 1070 aa13.43□□□□□ -0.26
DFFB-202ENST00000339350 TTLL12Q14166 644 aaPredicted RBP13.43□□□□□ -0.26
DFFB-202ENST00000339350 ALKBH5Q6P6C2 394 aaKnown RBP13.43□□□□□ -0.26
DFFB-202ENST00000339350 MPP4Q96JB8 637 aa13.43□□□□□ -0.26
DFFB-202ENST00000339350 ZNF287Q9HBT7 754 aa13.43□□□□□ -0.26
DFFB-202ENST00000339350 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.43□□□□□ -0.26
DFFB-202ENST00000339350 ENTPD5O75356 428 aa13.42□□□□□ -0.26
DFFB-202ENST00000339350 TROVE2P10155 538 aaKnown RBP eCLIP13.42□□□□□ -0.26
DFFB-202ENST00000339350 MYBP10242 640 aa13.42□□□□□ -0.26
DFFB-202ENST00000339350 SKIP12755 728 aa13.42□□□□□ -0.26
DFFB-202ENST00000339350 PHLDB3Q6NSJ2 640 aa13.42□□□□□ -0.26
DFFB-202ENST00000339350 ZNF804AQ7Z570 1209 aa13.42□□□□□ -0.26
DFFB-202ENST00000339350 SPATA24Q86W54 205 aa13.42□□□□□ -0.26
DFFB-202ENST00000339350 PDCD7Q8N8D1 485 aaKnown RBP13.42□□□□□ -0.26
DFFB-202ENST00000339350 GATA6Q92908 595 aa13.42□□□□□ -0.26
DFFB-202ENST00000339350 PPP2R3CQ969Q6 453 aa13.42□□□□□ -0.26
DFFB-202ENST00000339350 DYDC2Q96IM9 177 aa13.42□□□□□ -0.26
DFFB-202ENST00000339350 ZMAT2Q96NC0 199 aaKnown RBP13.42□□□□□ -0.26
DFFB-202ENST00000339350 OSGEPQ9NPF4 335 aa13.42□□□□□ -0.26
DFFB-202ENST00000339350 MTMR4Q9NYA4 1195 aa13.42□□□□□ -0.26
DFFB-202ENST00000339350 LDHCP07864 332 aa13.42□□□□□ -0.26
DFFB-202ENST00000339350 UCHL3P15374 230 aa13.42□□□□□ -0.26
DFFB-202ENST00000339350 NEK2P51955 445 aa13.42□□□□□ -0.26
DFFB-202ENST00000339350 IGBP1P78318 339 aa13.42□□□□□ -0.26
DFFB-202ENST00000339350 LIN52Q52LA3 116 aa13.42□□□□□ -0.26
DFFB-202ENST00000339350 ARSHQ5FYA8 562 aa13.42□□□□□ -0.26
DFFB-202ENST00000339350 SYDE2Q5VT97 1194 aa13.42□□□□□ -0.26
DFFB-202ENST00000339350 IRF2BP2Q7Z5L9 587 aa13.42□□□□□ -0.26
DFFB-202ENST00000339350 KSR1Q8IVT5 923 aa13.42□□□□□ -0.26
DFFB-202ENST00000339350 PROM2Q8N271 834 aa13.42□□□□□ -0.26
DFFB-202ENST00000339350 U2AF1L4Q8WU68 220 aaKnown RBP13.42□□□□□ -0.26
DFFB-202ENST00000339350 CENPTQ96BT3 561 aa13.42□□□□□ -0.26
DFFB-202ENST00000339350 CATSPER2Q96P56 530 aa13.42□□□□□ -0.26
DFFB-202ENST00000339350 RAB3IPQ96QF0 476 aaPredicted RBP13.42□□□□□ -0.26
DFFB-202ENST00000339350 SLC39A3Q9BRY0 314 aa13.42□□□□□ -0.26
DFFB-202ENST00000339350 KCTD10Q9H3F6 313 aa13.42□□□□□ -0.26
DFFB-202ENST00000339350 USP15Q9Y4E8 981 aaPredicted RBP13.42□□□□□ -0.26
DFFB-202ENST00000339350 PCDHB13Q9Y5F0 798 aa13.42□□□□□ -0.26
DFFB-202ENST00000339350 IDO1P14902 403 aa13.42□□□□□ -0.26
DFFB-202ENST00000339350 PPP4CP60510 307 aa13.42□□□□□ -0.26
DFFB-202ENST00000339350 MAP7Q14244 749 aa13.42□□□□□ -0.26
DFFB-202ENST00000339350 CFAP157Q5JU67 520 aa13.42□□□□□ -0.26
DFFB-202ENST00000339350 PEX26Q7Z412 305 aa13.42□□□□□ -0.26
DFFB-202ENST00000339350 SFR1Q86XK3 245 aa13.42□□□□□ -0.26
DFFB-202ENST00000339350 RIBC1Q8N443 379 aaPredicted RBP13.42□□□□□ -0.26
DFFB-202ENST00000339350 NMD3Q96D46 503 aaKnown RBP13.42□□□□□ -0.26
DFFB-202ENST00000339350 CEP295NLQ96MC4 621 aa13.42□□□□□ -0.26
DFFB-202ENST00000339350 PSTPIP2Q9H939 334 aa13.42□□□□□ -0.26
DFFB-202ENST00000339350 METTL5Q9NRN9 209 aaKnown RBP13.42□□□□□ -0.26
DFFB-202ENST00000339350 GGA1Q9UJY5 639 aa13.42□□□□□ -0.26
DFFB-202ENST00000339350 NAGPAQ9UK23 515 aa13.42□□□□□ -0.26
DFFB-202ENST00000339350 PCDHA2Q9Y5H9 948 aa13.42□□□□□ -0.26
DFFB-202ENST00000339350 ABCB11O95342 1321 aa13.41□□□□□ -0.26
DFFB-202ENST00000339350 SIGLEC16A6NMB1 481 aa13.41□□□□□ -0.26
DFFB-202ENST00000339350 ARPC4P59998 168 aa13.41□□□□□ -0.26
DFFB-202ENST00000339350 ZNF211Q13398 564 aaPredicted RBP13.41□□□□□ -0.26
DFFB-202ENST00000339350 FAM13CQ8NE31 585 aa13.41□□□□□ -0.26
DFFB-202ENST00000339350 SREK1Q8WXA9 508 aaKnown RBP13.41□□□□□ -0.26
DFFB-202ENST00000339350 SCG3Q8WXD2 468 aaKnown RBP13.41□□□□□ -0.26
DFFB-202ENST00000339350 SH3GL1Q99961 368 aa13.41□□□□□ -0.26
DFFB-202ENST00000339350 NSRP1Q9H0G5 558 aaKnown RBP13.41□□□□□ -0.26
DFFB-202ENST00000339350 ISCUQ9H1K1 167 aa13.41□□□□□ -0.26
DFFB-202ENST00000339350 SEPT11Q9NVA2 429 aaKnown RBP13.41□□□□□ -0.26
DFFB-202ENST00000339350 CTNNAL1Q9UBT7 734 aa13.41□□□□□ -0.26
DFFB-202ENST00000339350 CDK5RAP2Q96SN8 1893 aa13.41□□□□□ -0.26
DFFB-202ENST00000339350 USP11P51784 963 aa13.41□□□□□ -0.26
DFFB-202ENST00000339350 STKLD1Q8NE28 680 aa13.41□□□□□ -0.26
DFFB-202ENST00000339350 LRRC45Q96CN5 670 aa13.41□□□□□ -0.26
DFFB-202ENST00000339350 SPATA17Q96L03 361 aa13.41□□□□□ -0.26
DFFB-202ENST00000339350 TMEM237Q96Q45 408 aa13.41□□□□□ -0.26
DFFB-202ENST00000339350 TUT1Q9H6E5 874 aaKnown RBP13.41□□□□□ -0.26
DFFB-202ENST00000339350 INTS9Q9NV88 658 aaKnown RBP13.41□□□□□ -0.26
DFFB-202ENST00000339350 RNF14Q9UBS8 474 aa13.41□□□□□ -0.26
DFFB-202ENST00000339350 CHORDC1Q9UHD1 332 aaPredicted RBP13.41□□□□□ -0.26
DFFB-202ENST00000339350 SPTLC1O15269 473 aa13.4□□□□□ -0.26
DFFB-202ENST00000339350 AKAP3O75969 853 aa13.4□□□□□ -0.26
DFFB-202ENST00000339350 PDGFRBP09619 1106 aa13.4□□□□□ -0.26
DFFB-202ENST00000339350 GSTT2P0CG29 244 aa13.4□□□□□ -0.26
DFFB-202ENST00000339350 GSTT2BP0CG30 244 aa13.4□□□□□ -0.26
DFFB-202ENST00000339350 PON1P27169 355 aa13.4□□□□□ -0.26
DFFB-202ENST00000339350 LLGL1Q15334 1064 aa13.4□□□□□ -0.26
DFFB-202ENST00000339350 CCDC6Q16204 474 aa13.4□□□□□ -0.26
DFFB-202ENST00000339350 EXOC3L4Q17RC7 722 aa13.4□□□□□ -0.26
DFFB-202ENST00000339350 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.4□□□□□ -0.26
DFFB-202ENST00000339350 PRR16Q569H4 304 aa13.4□□□□□ -0.26
DFFB-202ENST00000339350 WDR78Q5VTH9 848 aa13.4□□□□□ -0.26
DFFB-202ENST00000339350 AADACL2Q6P093 401 aa13.4□□□□□ -0.26
DFFB-202ENST00000339350 SLC7A5P1Q8MH63 180 aa13.4□□□□□ -0.26
DFFB-202ENST00000339350 CERKQ8TCT0 537 aa13.4□□□□□ -0.26
DFFB-202ENST00000339350 PPP1R14BQ96C90 147 aa13.4□□□□□ -0.26
DFFB-202ENST00000339350 AIPL1Q9NZN9 384 aa13.4□□□□□ -0.26
DFFB-202ENST00000339350 ARMCX3Q9UH62 379 aaPredicted RBP13.4□□□□□ -0.26
DFFB-202ENST00000339350 TLDC2A0PJX2 215 aa13.4□□□□□ -0.26
DFFB-202ENST00000339350 VDRP11473 427 aa13.4□□□□□ -0.26
DFFB-202ENST00000339350 VAV1P15498 845 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms