RNA–Protein interactions for RNA: ENST00000339037.3

LINC01116-202, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 3 BASIC

Gene LINC01116, Length 838 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-202ENST00000339037 TTPALQ9BTX7 342 aa17.28■□□□□ 0.36
LINC01116-202ENST00000339037 FBXW11Q9UKB1 542 aa17.28■□□□□ 0.36
LINC01116-202ENST00000339037 ZFP37Q9Y6Q3 630 aaPredicted RBP17.28■□□□□ 0.36
LINC01116-202ENST00000339037 NUMBLQ9Y6R0 609 aa17.28■□□□□ 0.36
LINC01116-202ENST00000339037 LARGE1O95461 756 aa17.27■□□□□ 0.36
LINC01116-202ENST00000339037 SPATA31C1P0DKV0 1188 aa17.27■□□□□ 0.36
LINC01116-202ENST00000339037 ATP2B1P20020 1258 aa17.27■□□□□ 0.36
LINC01116-202ENST00000339037 FSHRP23945 695 aa17.27■□□□□ 0.36
LINC01116-202ENST00000339037 FOSBP53539 338 aa17.27■□□□□ 0.36
LINC01116-202ENST00000339037 PSMD5Q16401 504 aa17.27■□□□□ 0.36
LINC01116-202ENST00000339037 ME3Q16798 604 aa17.27■□□□□ 0.36
LINC01116-202ENST00000339037 FAM187BQ17R55 369 aa17.27■□□□□ 0.36
LINC01116-202ENST00000339037 FAM171A1Q5VUB5 890 aa17.27■□□□□ 0.36
LINC01116-202ENST00000339037 POTEGQ6S5H5 508 aa17.27■□□□□ 0.36
LINC01116-202ENST00000339037 PIK3R5Q8WYR1 880 aa17.27■□□□□ 0.36
LINC01116-202ENST00000339037 C2orf40Q9H1Z8 148 aa17.27■□□□□ 0.36
LINC01116-202ENST00000339037 FZD8Q9H461 694 aa17.27■□□□□ 0.36
LINC01116-202ENST00000339037 PDZD7Q9H5P4 517 aa17.27■□□□□ 0.36
LINC01116-202ENST00000339037 TUFT1Q9NNX1 390 aa17.27■□□□□ 0.36
LINC01116-202ENST00000339037 PTGESO14684 152 aa17.26■□□□□ 0.35
LINC01116-202ENST00000339037 N4BP3O15049 544 aa17.26■□□□□ 0.35
LINC01116-202ENST00000339037 RECQL4O94761 1208 aa17.26■□□□□ 0.35
LINC01116-202ENST00000339037 THP07101 528 aa17.26■□□□□ 0.35
LINC01116-202ENST00000339037 HNRNPA1P09651 372 aaKnown RBP eCLIP17.26■□□□□ 0.35
LINC01116-202ENST00000339037 PRPF4BQ13523 1007 aaKnown RBP17.26■□□□□ 0.35
LINC01116-202ENST00000339037 MAPK6Q16659 721 aa17.26■□□□□ 0.35
LINC01116-202ENST00000339037 SPECC1Q5M775 1068 aa17.26■□□□□ 0.35
LINC01116-202ENST00000339037 PHLDB3Q6NSJ2 640 aa17.26■□□□□ 0.35
LINC01116-202ENST00000339037 GRASPQ7Z6J2 395 aaPredicted RBP17.26■□□□□ 0.35
LINC01116-202ENST00000339037 CATSPER3Q86XQ3 398 aa17.26■□□□□ 0.35
LINC01116-202ENST00000339037 CEP57Q86XR8 500 aa17.26■□□□□ 0.35
LINC01116-202ENST00000339037 NSUN7Q8NE18 718 aaKnown RBP17.26■□□□□ 0.35
LINC01116-202ENST00000339037 ST13P5Q8NFI4 369 aaPredicted RBP17.26■□□□□ 0.35
LINC01116-202ENST00000339037 LNX1Q8TBB1 728 aaPredicted RBP17.26■□□□□ 0.35
LINC01116-202ENST00000339037 KCNG4Q8TDN1 519 aa17.26■□□□□ 0.35
LINC01116-202ENST00000339037 CLSTN3Q9BQT9 956 aa17.26■□□□□ 0.35
LINC01116-202ENST00000339037 TMEM60Q9H2L4 133 aa17.26■□□□□ 0.35
LINC01116-202ENST00000339037 SEMA4AQ9H3S1 761 aa17.26■□□□□ 0.35
LINC01116-202ENST00000339037 SLC2A4RGQ9NR83 387 aa17.26■□□□□ 0.35
LINC01116-202ENST00000339037 SIT1Q9Y3P8 196 aa17.26■□□□□ 0.35
LINC01116-202ENST00000339037 JAK2O60674 1132 aa17.25■□□□□ 0.35
LINC01116-202ENST00000339037 C8AP07357 584 aa17.25■□□□□ 0.35
LINC01116-202ENST00000339037 DCNP07585 359 aaKnown RBP17.25■□□□□ 0.35
LINC01116-202ENST00000339037 MCM7P33993 719 aa17.25■□□□□ 0.35
LINC01116-202ENST00000339037 ELAVL2Q12926 359 aaKnown RBP17.25■□□□□ 0.35
LINC01116-202ENST00000339037 PPM1LQ5SGD2 360 aa17.25■□□□□ 0.35
LINC01116-202ENST00000339037 PDXDC1Q6P996 788 aa17.25■□□□□ 0.35
LINC01116-202ENST00000339037 DCLRE1AQ6PJP8 1040 aa17.25■□□□□ 0.35
LINC01116-202ENST00000339037 NACC1Q96RE7 527 aa17.25■□□□□ 0.35
LINC01116-202ENST00000339037 ADPGKQ9BRR6 497 aa17.25■□□□□ 0.35
LINC01116-202ENST00000339037 SNTG2Q9NY99 539 aa17.25■□□□□ 0.35
LINC01116-202ENST00000339037 CDH7Q9ULB5 785 aa17.25■□□□□ 0.35
LINC01116-202ENST00000339037 MTCL1Q9Y4B5 1905 aaKnown RBP17.25■□□□□ 0.35
LINC01116-202ENST00000339037 OTOGLQ3ZCN5 2332 aa17.25■□□□□ 0.35
LINC01116-202ENST00000339037 CEP250Q9BV73 2442 aa17.25■□□□□ 0.35
LINC01116-202ENST00000339037 XYLBO75191 536 aa17.24■□□□□ 0.35
LINC01116-202ENST00000339037 MED24O75448 989 aa17.24■□□□□ 0.35
LINC01116-202ENST00000339037 SEC24BO95487 1268 aa17.24■□□□□ 0.35
LINC01116-202ENST00000339037 LMNAP02545 664 aaKnown RBP17.24■□□□□ 0.35
LINC01116-202ENST00000339037 PRKCBP05771 671 aa17.24■□□□□ 0.35
LINC01116-202ENST00000339037 LIG1P18858 919 aa17.24■□□□□ 0.35
LINC01116-202ENST00000339037 HOXA9P31269 272 aa17.24■□□□□ 0.35
LINC01116-202ENST00000339037 ID4P47928 161 aa17.24■□□□□ 0.35
LINC01116-202ENST00000339037 PADI6Q6TGC4 694 aa17.24■□□□□ 0.35
LINC01116-202ENST00000339037 PARM1Q6UWI2 310 aa17.24■□□□□ 0.35
LINC01116-202ENST00000339037 NOSTRINQ8IVI9 506 aa17.24■□□□□ 0.35
LINC01116-202ENST00000339037 ERMNQ8TAM6 284 aa17.24■□□□□ 0.35
LINC01116-202ENST00000339037 DEPTORQ8TB45 409 aa17.24■□□□□ 0.35
LINC01116-202ENST00000339037 BSNDQ8WZ55 320 aa17.24■□□□□ 0.35
LINC01116-202ENST00000339037 FGF14Q92915 247 aa17.24■□□□□ 0.35
LINC01116-202ENST00000339037 POLR3CQ9BUI4 534 aaPredicted RBP17.24■□□□□ 0.35
LINC01116-202ENST00000339037 POLIQ9UNA4 740 aa17.24■□□□□ 0.35
LINC01116-202ENST00000339037 R4GN57 208 aa17.24■□□□□ 0.35
LINC01116-202ENST00000339037 GPR179Q6PRD1 2367 aa17.24■□□□□ 0.35
LINC01116-202ENST00000339037 ARHGEF35A5YM69 484 aa17.23■□□□□ 0.35
LINC01116-202ENST00000339037 ACKR2O00590 384 aa17.23■□□□□ 0.35
LINC01116-202ENST00000339037 CCL16O15467 120 aa17.23■□□□□ 0.35
LINC01116-202ENST00000339037 NAMPTP43490 491 aa17.23■□□□□ 0.35
LINC01116-202ENST00000339037 NTHL1P78549 312 aa17.23■□□□□ 0.35
LINC01116-202ENST00000339037 NAB2Q15742 525 aa17.23■□□□□ 0.35
LINC01116-202ENST00000339037 ZC3H14Q6PJT7 736 aaKnown RBP17.23■□□□□ 0.35
LINC01116-202ENST00000339037 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.23■□□□□ 0.35
LINC01116-202ENST00000339037 MTSS1LQ765P7 747 aa17.23■□□□□ 0.35
LINC01116-202ENST00000339037 ERMP1Q7Z2K6 904 aa17.23■□□□□ 0.35
LINC01116-202ENST00000339037 PJA1Q8NG27 643 aa17.23■□□□□ 0.35
LINC01116-202ENST00000339037 SLC7A14Q8TBB6 771 aa17.23■□□□□ 0.35
LINC01116-202ENST00000339037 FGF13Q92913 245 aa17.23■□□□□ 0.35
LINC01116-202ENST00000339037 SHDQ96IW2 340 aa17.23■□□□□ 0.35
LINC01116-202ENST00000339037 RPP25Q9BUL9 199 aaKnown RBP17.23■□□□□ 0.35
LINC01116-202ENST00000339037 CCDC113Q9H0I3 377 aa17.23■□□□□ 0.35
LINC01116-202ENST00000339037 CXCL16Q9H2A7 254 aa17.23■□□□□ 0.35
LINC01116-202ENST00000339037 DLGAP2Q9P1A6 1054 aa17.23■□□□□ 0.35
LINC01116-202ENST00000339037 USP20Q9Y2K6 914 aa17.23■□□□□ 0.35
LINC01116-202ENST00000339037 ADAM12O43184 909 aa17.22■□□□□ 0.35
LINC01116-202ENST00000339037 ATMINO43313 823 aaPredicted RBP17.22■□□□□ 0.35
LINC01116-202ENST00000339037 CYP11B2P19099 503 aa17.22■□□□□ 0.35
LINC01116-202ENST00000339037 RPA1P27694 616 aa17.22■□□□□ 0.35
LINC01116-202ENST00000339037 GPC5P78333 572 aa17.22■□□□□ 0.35
LINC01116-202ENST00000339037 PPP2R5AQ15172 486 aa17.22■□□□□ 0.35
LINC01116-202ENST00000339037 SAFBQ15424 915 aaKnown RBP eCLIP17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms