RNA–Protein interactions for RNA: ENST00000337354.8

SEC13-201, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SEC13, Length 1,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-201ENST00000337354 KLK14Q9P0G3 267 aa16.73■□□□□ 0.27
SEC13-201ENST00000337354 CNTN3Q9P232 1028 aa16.73■□□□□ 0.27
SEC13-201ENST00000337354 INPP5FQ9Y2H2 1132 aa16.73■□□□□ 0.27
SEC13-201ENST00000337354 RWDD3Q9Y3V2 267 aa16.73■□□□□ 0.27
SEC13-201ENST00000337354 CYP2J2P51589 502 aa16.72■□□□□ 0.27
SEC13-201ENST00000337354 RNASELQ05823 741 aaKnown RBP16.72■□□□□ 0.27
SEC13-201ENST00000337354 PPP2R3AQ06190 1150 aa16.72■□□□□ 0.27
SEC13-201ENST00000337354 GRIK3Q13003 919 aa16.72■□□□□ 0.27
SEC13-201ENST00000337354 PAK1Q13153 545 aa16.72■□□□□ 0.27
SEC13-201ENST00000337354 SURF1Q15526 300 aa16.72■□□□□ 0.27
SEC13-201ENST00000337354 ENOX2Q16206 610 aaKnown RBP16.72■□□□□ 0.27
SEC13-201ENST00000337354 ZBTB41Q5SVQ8 909 aa16.72■□□□□ 0.27
SEC13-201ENST00000337354 ANKRD40Q6AI12 368 aa16.72■□□□□ 0.27
SEC13-201ENST00000337354 NT5DC4Q86YG4 428 aa16.72■□□□□ 0.27
SEC13-201ENST00000337354 CLP1Q92989 425 aaKnown RBP16.72■□□□□ 0.27
SEC13-201ENST00000337354 TIFAQ96CG3 184 aa16.72■□□□□ 0.27
SEC13-201ENST00000337354 SAAL1Q96ER3 474 aa16.72■□□□□ 0.27
SEC13-201ENST00000337354 SAMD11Q96NU1 681 aa16.72■□□□□ 0.27
SEC13-201ENST00000337354 SLC28A3Q9HAS3 691 aa16.72■□□□□ 0.27
SEC13-201ENST00000337354 AAASQ9NRG9 546 aa16.72■□□□□ 0.27
SEC13-201ENST00000337354 SLC38A7Q9NVC3 462 aa16.72■□□□□ 0.27
SEC13-201ENST00000337354 TBC1D13Q9NVG8 400 aa16.72■□□□□ 0.27
SEC13-201ENST00000337354 ANO10Q9NW15 660 aa16.72■□□□□ 0.27
SEC13-201ENST00000337354 FRMD4BQ9Y2L6 1034 aa16.72■□□□□ 0.27
SEC13-201ENST00000337354 DERAQ9Y315 318 aa16.72■□□□□ 0.27
SEC13-201ENST00000337354 TMEM265A0A087WTH1 108 aa16.71■□□□□ 0.27
SEC13-201ENST00000337354 SMIM28A0A1B0GU29 152 aa16.71■□□□□ 0.27
SEC13-201ENST00000337354 GOLGA8IPA6NC78 632 aa16.71■□□□□ 0.27
SEC13-201ENST00000337354 GOLGA8JA6NMD2 632 aa16.71■□□□□ 0.27
SEC13-201ENST00000337354 CETN3O15182 167 aa16.71■□□□□ 0.27
SEC13-201ENST00000337354 MAPK13O15264 365 aa16.71■□□□□ 0.27
SEC13-201ENST00000337354 IL18RAPO95256 599 aa16.71■□□□□ 0.27
SEC13-201ENST00000337354 POMCP01189 267 aa16.71■□□□□ 0.27
SEC13-201ENST00000337354 CA3P07451 260 aa16.71■□□□□ 0.27
SEC13-201ENST00000337354 CXCL8P10145 99 aa16.71■□□□□ 0.27
SEC13-201ENST00000337354 NR2F2P24468 414 aa16.71■□□□□ 0.27
SEC13-201ENST00000337354 ERCC5P28715 1186 aaPredicted RBP16.71■□□□□ 0.27
SEC13-201ENST00000337354 SCNN1GP51170 649 aa16.71■□□□□ 0.27
SEC13-201ENST00000337354 AFF1P51825 1210 aaKnown RBP16.71■□□□□ 0.27
SEC13-201ENST00000337354 SNRNP35Q16560 246 aaKnown RBP16.71■□□□□ 0.27
SEC13-201ENST00000337354 PAN2Q504Q3 1202 aaKnown RBP16.71■□□□□ 0.27
SEC13-201ENST00000337354 LRRC55Q6ZSA7 311 aa16.71■□□□□ 0.27
SEC13-201ENST00000337354 BRSK2Q8IWQ3 736 aa16.71■□□□□ 0.27
SEC13-201ENST00000337354 NELFBQ8WX92 580 aa16.71■□□□□ 0.27
SEC13-201ENST00000337354 FAM193BQ96PV7 902 aaPredicted RBP16.71■□□□□ 0.27
SEC13-201ENST00000337354 TMEM175Q9BSA9 504 aa16.71■□□□□ 0.27
SEC13-201ENST00000337354 NKX2-4Q9H2Z4 354 aa16.71■□□□□ 0.27
SEC13-201ENST00000337354 MIOSQ9NXC5 875 aa16.71■□□□□ 0.27
SEC13-201ENST00000337354 RBAKQ9NYW8 714 aaPredicted RBP16.71■□□□□ 0.27
SEC13-201ENST00000337354 RWDD2AQ9UIY3 292 aa16.71■□□□□ 0.27
SEC13-201ENST00000337354 YBX2Q9Y2T7 364 aaKnown RBP16.71■□□□□ 0.27
SEC13-201ENST00000337354 TTC3P53804 2025 aa16.7■□□□□ 0.26
SEC13-201ENST00000337354 LAMA2P24043 3122 aaKnown RBP16.7■□□□□ 0.26
SEC13-201ENST00000337354 LCHNA4D1U4 455 aa16.7■□□□□ 0.26
SEC13-201ENST00000337354 LINC01553A4QN01 128 aa16.7■□□□□ 0.26
SEC13-201ENST00000337354 LACTBL1A8MY62 500 aa16.7■□□□□ 0.26
SEC13-201ENST00000337354 PTGESO14684 152 aa16.7■□□□□ 0.26
SEC13-201ENST00000337354 XPOTO43592 962 aaKnown RBP16.7■□□□□ 0.26
SEC13-201ENST00000337354 ALDH2P05091 517 aa16.7■□□□□ 0.26
SEC13-201ENST00000337354 MYOGP15173 224 aa16.7■□□□□ 0.26
SEC13-201ENST00000337354 KLHL10Q6JEL2 608 aa16.7■□□□□ 0.26
SEC13-201ENST00000337354 MKNK1Q9BUB5 465 aa16.7■□□□□ 0.26
SEC13-201ENST00000337354 CWH43Q9H720 699 aa16.7■□□□□ 0.26
SEC13-201ENST00000337354 C2CD2Q9Y426 696 aa16.7■□□□□ 0.26
SEC13-201ENST00000337354 MRPL42Q9Y6G3 142 aaKnown RBP16.7■□□□□ 0.26
SEC13-201ENST00000337354 MEFVO15553 781 aaPredicted RBP16.69■□□□□ 0.26
SEC13-201ENST00000337354 FGFR1OPO95684 399 aaKnown RBP16.69■□□□□ 0.26
SEC13-201ENST00000337354 RB1P06400 928 aa16.69■□□□□ 0.26
SEC13-201ENST00000337354 LAG3P18627 525 aa16.69■□□□□ 0.26
SEC13-201ENST00000337354 CYP3A5P20815 502 aa16.69■□□□□ 0.26
SEC13-201ENST00000337354 PSMC2P35998 433 aaKnown RBP16.69■□□□□ 0.26
SEC13-201ENST00000337354 ALDH7A1P49419 539 aaKnown RBP16.69■□□□□ 0.26
SEC13-201ENST00000337354 PMS1P54277 932 aaKnown RBP16.69■□□□□ 0.26
SEC13-201ENST00000337354 ENPEPQ07075 957 aa16.69■□□□□ 0.26
SEC13-201ENST00000337354 DSC1Q08554 894 aa16.69■□□□□ 0.26
SEC13-201ENST00000337354 TUSC3Q13454 348 aa16.69■□□□□ 0.26
SEC13-201ENST00000337354 ZBTB6Q15916 424 aa16.69■□□□□ 0.26
SEC13-201ENST00000337354 DPCR1Q3MIW9 517 aa16.69■□□□□ 0.26
SEC13-201ENST00000337354 SPOUT1Q5T280 376 aaKnown RBP16.69■□□□□ 0.26
SEC13-201ENST00000337354 CEP135Q66GS9 1140 aa16.69■□□□□ 0.26
SEC13-201ENST00000337354 TTI2Q6NXR4 508 aa16.69■□□□□ 0.26
SEC13-201ENST00000337354 USP37Q86T82 979 aa16.69■□□□□ 0.26
SEC13-201ENST00000337354 CBWD2Q8IUF1 395 aa16.69■□□□□ 0.26
SEC13-201ENST00000337354 ZC3H3Q8IXZ2 948 aaKnown RBP16.69■□□□□ 0.26
SEC13-201ENST00000337354 RDH13Q8NBN7 331 aa16.69■□□□□ 0.26
SEC13-201ENST00000337354 NOC3LQ8WTT2 800 aaKnown RBP16.69■□□□□ 0.26
SEC13-201ENST00000337354 FAM212AQ96EL1 285 aa16.69■□□□□ 0.26
SEC13-201ENST00000337354 MFSD14AQ96MC6 490 aa16.69■□□□□ 0.26
SEC13-201ENST00000337354 PPP1R10Q96QC0 940 aaKnown RBP16.69■□□□□ 0.26
SEC13-201ENST00000337354 TGS1Q96RS0 853 aaKnown RBP16.69■□□□□ 0.26
SEC13-201ENST00000337354 PLVAPQ9BX97 442 aa16.69■□□□□ 0.26
SEC13-201ENST00000337354 NRDE2Q9H7Z3 1164 aa16.69■□□□□ 0.26
SEC13-201ENST00000337354 UBQLN1Q9UMX0 589 aaKnown RBP16.69■□□□□ 0.26
SEC13-201ENST00000337354 PCDHB12Q9Y5F1 795 aa16.69■□□□□ 0.26
SEC13-201ENST00000337354 COL4A4P53420 1690 aaPredicted RBP16.69■□□□□ 0.26
SEC13-201ENST00000337354 DDHD2O94830 711 aa16.68■□□□□ 0.26
SEC13-201ENST00000337354 BMPR1AP36894 532 aa16.68■□□□□ 0.26
SEC13-201ENST00000337354 ERVK-21P61565 698 aa16.68■□□□□ 0.26
SEC13-201ENST00000337354 TAP1Q03518 808 aa16.68■□□□□ 0.26
SEC13-201ENST00000337354 PSMD6Q15008 389 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms