RNA–Protein interactions for RNA: ENST00000335551.11

CSMD1-201, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 12,134 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-201ENST00000335551 RESP18Q5W5W9 173 aa6.49□□□□□ -1.37
CSMD1-201ENST00000335551 APPL2Q8NEU8 664 aa6.49□□□□□ -1.37
CSMD1-201ENST00000335551 WDR11Q9BZH6 1224 aa6.49□□□□□ -1.37
CSMD1-201ENST00000335551 CAAP1Q9H8G2 361 aa6.49□□□□□ -1.37
CSMD1-201ENST00000335551 KRT84Q9NSB2 600 aa6.49□□□□□ -1.37
CSMD1-201ENST00000335551 IP6K2Q9UHH9 426 aa6.49□□□□□ -1.37
CSMD1-201ENST00000335551 GGA1Q9UJY5 639 aa6.49□□□□□ -1.37
CSMD1-201ENST00000335551 JAG2Q9Y219 1238 aa6.49□□□□□ -1.37
CSMD1-201ENST00000335551 ADAMTS12P58397 1594 aa6.49□□□□□ -1.37
CSMD1-201ENST00000335551 MFN2O95140 757 aa6.49□□□□□ -1.37
CSMD1-201ENST00000335551 ZNF18P17022 549 aa6.49□□□□□ -1.37
CSMD1-201ENST00000335551 PLA2G4AP47712 749 aa6.49□□□□□ -1.37
CSMD1-201ENST00000335551 PCNX4Q63HM2 1172 aa6.49□□□□□ -1.37
CSMD1-201ENST00000335551 SF3B1O75533 1304 aaKnown RBP eCLIP6.49□□□□□ -1.371e-7■■■■■ 172.3
CSMD1-201ENST00000335551 KIAA0232Q92628 1395 aa6.49□□□□□ -1.37
CSMD1-201ENST00000335551 PGM3O95394 542 aa6.49□□□□□ -1.37
CSMD1-201ENST00000335551 SERPINB9P50453 376 aa6.49□□□□□ -1.37
CSMD1-201ENST00000335551 SEMA3FQ13275 785 aa6.49□□□□□ -1.37
CSMD1-201ENST00000335551 R3HDM1Q15032 1099 aaKnown RBP6.49□□□□□ -1.37
CSMD1-201ENST00000335551 KYNUQ16719 465 aa6.49□□□□□ -1.37
CSMD1-201ENST00000335551 TRMT5Q32P41 509 aaKnown RBP6.49□□□□□ -1.37
CSMD1-201ENST00000335551 TBC1D19Q8N5T2 526 aa6.49□□□□□ -1.37
CSMD1-201ENST00000335551 DPP10Q8N608 796 aa6.49□□□□□ -1.37
CSMD1-201ENST00000335551 MB21D1Q8N884 522 aa6.49□□□□□ -1.37
CSMD1-201ENST00000335551 IFT43Q96FT9 208 aa6.49□□□□□ -1.37
CSMD1-201ENST00000335551 MLXIPQ9HAP2 919 aa6.49□□□□□ -1.37
CSMD1-201ENST00000335551 KMT5AQ9NQR1 393 aa6.49□□□□□ -1.37
CSMD1-201ENST00000335551 SEPT9Q9UHD8 586 aaPredicted RBP6.49□□□□□ -1.37
CSMD1-201ENST00000335551 LRCH1Q9Y2L9 728 aa6.49□□□□□ -1.37
CSMD1-201ENST00000335551 O00370 1275 aa6.49□□□□□ -1.37
CSMD1-201ENST00000335551 CAND2O75155 1236 aa6.49□□□□□ -1.37
CSMD1-201ENST00000335551 FGFR4P22455 802 aa6.49□□□□□ -1.37
CSMD1-201ENST00000335551 TNFAIP1Q13829 316 aa6.49□□□□□ -1.37
CSMD1-201ENST00000335551 C12orf60Q5U649 245 aa6.49□□□□□ -1.37
CSMD1-201ENST00000335551 ZNF564Q8TBZ8 553 aaPredicted RBP6.49□□□□□ -1.37
CSMD1-201ENST00000335551 DCLRE1BQ9H816 532 aa6.49□□□□□ -1.37
CSMD1-201ENST00000335551 SUGCTQ9HAC7 445 aa6.49□□□□□ -1.37
CSMD1-201ENST00000335551 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.49□□□□□ -1.37
CSMD1-201ENST00000335551 AIPL1Q9NZN9 384 aa6.49□□□□□ -1.37
CSMD1-201ENST00000335551 INPP5FQ9Y2H2 1132 aa6.49□□□□□ -1.37
CSMD1-201ENST00000335551 PCDHA1Q9Y5I3 950 aa6.49□□□□□ -1.37
CSMD1-201ENST00000335551 NPC1L1Q9UHC9 1359 aa6.49□□□□□ -1.37
CSMD1-201ENST00000335551 STK25O00506 426 aa6.49□□□□□ -1.37
CSMD1-201ENST00000335551 ABCB1P08183 1280 aaPredicted RBP6.49□□□□□ -1.37
CSMD1-201ENST00000335551 C8orf37Q96NL8 207 aa6.49□□□□□ -1.37
CSMD1-201ENST00000335551 KANSL1LA0AUZ9 987 aa6.49□□□□□ -1.37
CSMD1-201ENST00000335551 S100A6P06703 90 aa6.49□□□□□ -1.37
CSMD1-201ENST00000335551 TBXAS1P24557 533 aaPredicted RBP6.49□□□□□ -1.37
CSMD1-201ENST00000335551 BCAP31P51572 246 aa6.49□□□□□ -1.37
CSMD1-201ENST00000335551 ZBTB33Q86T24 672 aa6.49□□□□□ -1.37
CSMD1-201ENST00000335551 ERICH1Q86X53 443 aa6.49□□□□□ -1.37
CSMD1-201ENST00000335551 HEXIM2Q96MH2 286 aaKnown RBP6.49□□□□□ -1.37
CSMD1-201ENST00000335551 GCNAQ96QF7 691 aa6.49□□□□□ -1.37
CSMD1-201ENST00000335551 UBXN6Q9BZV1 441 aa6.49□□□□□ -1.37
CSMD1-201ENST00000335551 HSPBP1Q9NZL4 362 aa6.49□□□□□ -1.37
CSMD1-201ENST00000335551 ZHX2Q9Y6X8 837 aa6.49□□□□□ -1.37
CSMD1-201ENST00000335551 ADGRF5Q8IZF2 1346 aa6.49□□□□□ -1.37
CSMD1-201ENST00000335551 KLRF2D3W0D1 207 aa6.49□□□□□ -1.37
CSMD1-201ENST00000335551 APOL1O14791 398 aa6.49□□□□□ -1.37
CSMD1-201ENST00000335551 NCAPHQ15003 741 aa6.49□□□□□ -1.37
CSMD1-201ENST00000335551 PDZK1Q5T2W1 519 aa6.49□□□□□ -1.37
CSMD1-201ENST00000335551 SLC10A4Q96EP9 437 aa6.49□□□□□ -1.37
CSMD1-201ENST00000335551 C1orf50Q9BV19 199 aa6.49□□□□□ -1.37
CSMD1-201ENST00000335551 C6orf62Q9GZU0 229 aaPredicted RBP6.49□□□□□ -1.37
CSMD1-201ENST00000335551 DMAP1Q9NPF5 467 aaPredicted RBP6.49□□□□□ -1.37
CSMD1-201ENST00000335551 ADAM22Q9P0K1 906 aa6.49□□□□□ -1.37
CSMD1-201ENST00000335551 TNKSO95271 1327 aa6.49□□□□□ -1.37
CSMD1-201ENST00000335551 SMAPO00193 183 aa6.48□□□□□ -1.37
CSMD1-201ENST00000335551 ZNF862O60290 1169 aa6.48□□□□□ -1.37
CSMD1-201ENST00000335551 MPP4Q96JB8 637 aa6.48□□□□□ -1.37
CSMD1-201ENST00000335551 TRIM62Q9BVG3 475 aa6.48□□□□□ -1.37
CSMD1-201ENST00000335551 PLCG1P19174 1290 aa6.48□□□□□ -1.37
CSMD1-201ENST00000335551 PIK3R1P27986 724 aa6.48□□□□□ -1.37
CSMD1-201ENST00000335551 PKN3Q6P5Z2 889 aa6.48□□□□□ -1.37
CSMD1-201ENST00000335551 CDHR1Q96JP9 859 aa6.48□□□□□ -1.37
CSMD1-201ENST00000335551 TUFT1Q9NNX1 390 aa6.48□□□□□ -1.37
CSMD1-201ENST00000335551 KLHL3Q9UH77 587 aa6.48□□□□□ -1.37
CSMD1-201ENST00000335551 MYH14Q7Z406 1995 aaKnown RBP6.48□□□□□ -1.37
CSMD1-201ENST00000335551 AIM2O14862 343 aa6.48□□□□□ -1.37
CSMD1-201ENST00000335551 PDE8AO60658 829 aa6.48□□□□□ -1.37
CSMD1-201ENST00000335551 ENO3P13929 434 aaPredicted RBP6.48□□□□□ -1.37
CSMD1-201ENST00000335551 PEX5P50542 639 aa6.48□□□□□ -1.37
CSMD1-201ENST00000335551 KLHL24Q6TFL4 600 aa6.48□□□□□ -1.37
CSMD1-201ENST00000335551 CPXCR1Q8N123 301 aa6.48□□□□□ -1.37
CSMD1-201ENST00000335551 XPO6Q96QU8 1125 aaKnown RBP6.48□□□□□ -1.37
CSMD1-201ENST00000335551 ITGAXP20702 1163 aa6.48□□□□□ -1.37
CSMD1-201ENST00000335551 LRRC14Q15048 493 aa6.48□□□□□ -1.37
CSMD1-201ENST00000335551 EFHBQ8N7U6 833 aa6.48□□□□□ -1.37
CSMD1-201ENST00000335551 BEST2Q8NFU1 509 aa6.48□□□□□ -1.37
CSMD1-201ENST00000335551 RMND5BQ96G75 393 aaPredicted RBP6.48□□□□□ -1.37
CSMD1-201ENST00000335551 DBNDD2Q9BQY9 259 aa6.48□□□□□ -1.37
CSMD1-201ENST00000335551 HDHD2Q9H0R4 259 aa6.48□□□□□ -1.37
CSMD1-201ENST00000335551 SAMSN1Q9NSI8 373 aaKnown RBP6.48□□□□□ -1.37
CSMD1-201ENST00000335551 CTNNAL1Q9UBT7 734 aa6.48□□□□□ -1.37
CSMD1-201ENST00000335551 MYO3BQ8WXR4 1341 aa6.48□□□□□ -1.37
CSMD1-201ENST00000335551 LCA5LO95447 670 aa6.48□□□□□ -1.37
CSMD1-201ENST00000335551 PDIA3P30101 505 aaKnown RBP6.48□□□□□ -1.37
CSMD1-201ENST00000335551 SESN2P58004 480 aaPredicted RBP6.48□□□□□ -1.37
CSMD1-201ENST00000335551 TSNQ15631 228 aaKnown RBP6.48□□□□□ -1.37
CSMD1-201ENST00000335551 CCDC144BQ3MJ40 725 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms