RNA–Protein interactions for RNA: ENST00000334318.10

PTBP3-202, Transcript of polypyrimidine tract binding protein 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PTBP3, Length 7,990 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP3-202ENST00000334318 C10orf120Q5SQS8 335 aa6.65□□□□□ -1.35
PTBP3-202ENST00000334318 E4F1Q66K89 784 aaPredicted RBP6.65□□□□□ -1.35
PTBP3-202ENST00000334318 RNF217Q8TC41 542 aa6.65□□□□□ -1.35
PTBP3-202ENST00000334318 BRI3BPQ8WY22 251 aa6.65□□□□□ -1.35
PTBP3-202ENST00000334318 ATP2A3Q93084 1043 aa6.65□□□□□ -1.35
PTBP3-202ENST00000334318 TLL2Q9Y6L7 1015 aa6.65□□□□□ -1.35
PTBP3-202ENST00000334318 RALAP11233 206 aa6.65□□□□□ -1.35
PTBP3-202ENST00000334318 NR1D1P20393 614 aa6.65□□□□□ -1.35
PTBP3-202ENST00000334318 TRIP13Q15645 432 aaPredicted RBP6.65□□□□□ -1.35
PTBP3-202ENST00000334318 RNF10Q8N5U6 811 aaKnown RBP6.65□□□□□ -1.35
PTBP3-202ENST00000334318 ABHD16BQ9H3Z7 469 aa6.65□□□□□ -1.35
PTBP3-202ENST00000334318 KDM6AO15550 1401 aaPredicted RBP6.65□□□□□ -1.35
PTBP3-202ENST00000334318 M0QYV0 167 aa6.65□□□□□ -1.35
PTBP3-202ENST00000334318 PER2O15055 1255 aa6.65□□□□□ -1.35
PTBP3-202ENST00000334318 FGGP02679 453 aa6.65□□□□□ -1.35
PTBP3-202ENST00000334318 CD52P31358 61 aa6.65□□□□□ -1.35
PTBP3-202ENST00000334318 CCZ1BP86790 482 aa6.65□□□□□ -1.35
PTBP3-202ENST00000334318 CCZ1P86791 482 aaPredicted RBP6.65□□□□□ -1.35
PTBP3-202ENST00000334318 GRM4Q14833 912 aa6.65□□□□□ -1.35
PTBP3-202ENST00000334318 ZNF449Q6P9G9 518 aa6.65□□□□□ -1.35
PTBP3-202ENST00000334318 ARMCX6Q7L4S7 300 aa6.65□□□□□ -1.35
PTBP3-202ENST00000334318 MCUQ8NE86 351 aa6.65□□□□□ -1.35
PTBP3-202ENST00000334318 NEK9Q8TD19 979 aa6.65□□□□□ -1.35
PTBP3-202ENST00000334318 LRRC8CQ8TDW0 803 aa6.65□□□□□ -1.35
PTBP3-202ENST00000334318 HDAC6Q9UBN7 1215 aa6.65□□□□□ -1.35
PTBP3-202ENST00000334318 MAD1L1Q9Y6D9 718 aa6.65□□□□□ -1.35
PTBP3-202ENST00000334318 A0A087WZ62 844 aa6.64□□□□□ -1.35
PTBP3-202ENST00000334318 TXNDC9O14530 226 aa6.64□□□□□ -1.35
PTBP3-202ENST00000334318 PALMO75781 387 aa6.64□□□□□ -1.35
PTBP3-202ENST00000334318 SUN1O94901 812 aa6.64□□□□□ -1.35
PTBP3-202ENST00000334318 ZNF543Q08ER8 600 aa6.64□□□□□ -1.35
PTBP3-202ENST00000334318 POM121L1PQ3SYA9 428 aa6.64□□□□□ -1.35
PTBP3-202ENST00000334318 RFX6Q8HWS3 928 aa6.64□□□□□ -1.35
PTBP3-202ENST00000334318 HELQQ8TDG4 1101 aa6.64□□□□□ -1.35
PTBP3-202ENST00000334318 WHAMMQ8TF30 809 aa6.64□□□□□ -1.35
PTBP3-202ENST00000334318 MRPS31Q92665 395 aaKnown RBP6.64□□□□□ -1.35
PTBP3-202ENST00000334318 TBC1D31Q96DN5 1066 aa6.64□□□□□ -1.35
PTBP3-202ENST00000334318 FDXACB1Q9BRP7 624 aaPredicted RBP6.64□□□□□ -1.35
PTBP3-202ENST00000334318 MUC3BQ9H195 1237 aa6.64□□□□□ -1.35
PTBP3-202ENST00000334318 SHROOM2Q13796 1616 aa6.64□□□□□ -1.35
PTBP3-202ENST00000334318 TSPAN3O60637 253 aa6.64□□□□□ -1.35
PTBP3-202ENST00000334318 SEC13P55735 322 aa6.64□□□□□ -1.35
PTBP3-202ENST00000334318 PDCLQ13371 301 aa6.64□□□□□ -1.35
PTBP3-202ENST00000334318 APOBEC3HQ6NTF7 200 aaKnown RBP6.64□□□□□ -1.35
PTBP3-202ENST00000334318 PPP4R3CPQ6ZMV5 832 aa6.64□□□□□ -1.35
PTBP3-202ENST00000334318 GSPT2Q8IYD1 628 aaKnown RBP6.64□□□□□ -1.35
PTBP3-202ENST00000334318 FAM198AQ9UFP1 575 aa6.64□□□□□ -1.35
PTBP3-202ENST00000334318 FBXO10Q9UK96 956 aa6.64□□□□□ -1.35
PTBP3-202ENST00000334318 DNAJC12Q9UKB3 198 aa6.64□□□□□ -1.35
PTBP3-202ENST00000334318 A0A087WUV0 522 aaPredicted RBP6.64□□□□□ -1.35
PTBP3-202ENST00000334318 STRNO43815 780 aa6.64□□□□□ -1.35
PTBP3-202ENST00000334318 ATP2C1P98194 919 aaPredicted RBP6.64□□□□□ -1.35
PTBP3-202ENST00000334318 TMEM132BQ14DG7 1078 aa6.64□□□□□ -1.35
PTBP3-202ENST00000334318 ALS2CLQ60I27 953 aa6.64□□□□□ -1.35
PTBP3-202ENST00000334318 SRBD1Q8N5C6 995 aaKnown RBP6.64□□□□□ -1.35
PTBP3-202ENST00000334318 DEFB119Q8N690 84 aa6.64□□□□□ -1.35
PTBP3-202ENST00000334318 RTFDC1Q9BY42 306 aaPredicted RBP6.64□□□□□ -1.35
PTBP3-202ENST00000334318 MRPL4Q9BYD3 311 aaKnown RBP6.64□□□□□ -1.35
PTBP3-202ENST00000334318 ESYT3A0FGR9 886 aa6.64□□□□□ -1.35
PTBP3-202ENST00000334318 SLC15A5A6NIM6 579 aa6.64□□□□□ -1.35
PTBP3-202ENST00000334318 SLC12A2P55011 1212 aa6.64□□□□□ -1.35
PTBP3-202ENST00000334318 ACTR2P61160 394 aa6.64□□□□□ -1.35
PTBP3-202ENST00000334318 SARNPP82979 210 aaKnown RBP6.64□□□□□ -1.35
PTBP3-202ENST00000334318 PLD1Q13393 1074 aa6.64□□□□□ -1.35
PTBP3-202ENST00000334318 PPP6R3Q5H9R7 873 aaPredicted RBP6.64□□□□□ -1.35
PTBP3-202ENST00000334318 ADGRA1Q86SQ6 560 aa6.64□□□□□ -1.35
PTBP3-202ENST00000334318 APPL2Q8NEU8 664 aa6.64□□□□□ -1.35
PTBP3-202ENST00000334318 GTPBP2Q9BX10 602 aaKnown RBP6.64□□□□□ -1.35
PTBP3-202ENST00000334318 VCX3BQ9H321 246 aa6.64□□□□□ -1.35
PTBP3-202ENST00000334318 SENP2Q9HC62 589 aa6.64□□□□□ -1.35
PTBP3-202ENST00000334318 DNAJC17Q9NVM6 304 aaKnown RBP6.64□□□□□ -1.35
PTBP3-202ENST00000334318 ANAPC5Q9UJX4 755 aa6.64□□□□□ -1.35
PTBP3-202ENST00000334318 ARHGAP42A6NI28 874 aa6.64□□□□□ -1.35
PTBP3-202ENST00000334318 NCK2O43639 380 aa6.64□□□□□ -1.35
PTBP3-202ENST00000334318 FDX1P10109 184 aa6.64□□□□□ -1.35
PTBP3-202ENST00000334318 INSRRP14616 1297 aa6.64□□□□□ -1.35
PTBP3-202ENST00000334318 C10orf76Q5T2E6 689 aa6.64□□□□□ -1.35
PTBP3-202ENST00000334318 MFSD4BQ5TF39 518 aa6.64□□□□□ -1.35
PTBP3-202ENST00000334318 PDZD4Q76G19 769 aaPredicted RBP6.64□□□□□ -1.35
PTBP3-202ENST00000334318 IGDCC4Q8TDY8 1250 aa6.64□□□□□ -1.35
PTBP3-202ENST00000334318 RAD54LQ92698 747 aa6.64□□□□□ -1.35
PTBP3-202ENST00000334318 SRPK1Q96SB4 655 aaKnown RBP6.64□□□□□ -1.35
PTBP3-202ENST00000334318 ZWILCHQ9H900 591 aa6.64□□□□□ -1.35
PTBP3-202ENST00000334318 NGRNQ9NPE2 291 aaKnown RBP6.64□□□□□ -1.35
PTBP3-202ENST00000334318 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.64□□□□□ -1.35
PTBP3-202ENST00000334318 TRMT13Q9NUP7 481 aaKnown RBP6.64□□□□□ -1.35
PTBP3-202ENST00000334318 CEP72Q9P209 647 aa6.64□□□□□ -1.35
PTBP3-202ENST00000334318 GMEB2Q9UKD1 530 aa6.64□□□□□ -1.35
PTBP3-202ENST00000334318 SNX24Q9Y343 169 aa6.64□□□□□ -1.35
PTBP3-202ENST00000334318 MRPS23Q9Y3D9 190 aaKnown RBP6.64□□□□□ -1.35
PTBP3-202ENST00000334318 RASGRF2O14827 1237 aa6.64□□□□□ -1.35
PTBP3-202ENST00000334318 MAP3K7O43318 606 aa6.64□□□□□ -1.35
PTBP3-202ENST00000334318 RFX5P48382 616 aaPredicted RBP6.64□□□□□ -1.35
PTBP3-202ENST00000334318 DR1Q01658 176 aa6.64□□□□□ -1.35
PTBP3-202ENST00000334318 GFPT1Q06210 699 aaPredicted RBP6.64□□□□□ -1.35
PTBP3-202ENST00000334318 KCNH2Q12809 1159 aa6.64□□□□□ -1.35
PTBP3-202ENST00000334318 AP3B2Q13367 1082 aa6.64□□□□□ -1.35
PTBP3-202ENST00000334318 HSPH1Q92598 858 aa6.64□□□□□ -1.35
PTBP3-202ENST00000334318 SH3KBP1Q96B97 665 aa6.64□□□□□ -1.35
PTBP3-202ENST00000334318 ZNF558Q96NG5 402 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms