RNA–Protein interactions for RNA: ENST00000330852.9

RAB28-202, Transcript of RAB28, member RAS oncogene family, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RAB28, Length 1,715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-202ENST00000330852 PAAF1Q9BRP4 392 aa19.9■□□□□ 0.78
RAB28-202ENST00000330852 CCDC94Q9BW85 323 aaPredicted RBP19.9■□□□□ 0.78
RAB28-202ENST00000330852 POLD4Q9HCU8 107 aa19.9■□□□□ 0.78
RAB28-202ENST00000330852 IGSF9Q9P2J2 1179 aa19.9■□□□□ 0.78
RAB28-202ENST00000330852 USP20Q9Y2K6 914 aa19.9■□□□□ 0.78
RAB28-202ENST00000330852 DOCK8Q8NF50 2099 aa19.89■□□□□ 0.77
RAB28-202ENST00000330852 VWA8A3KMH1 1905 aa19.89■□□□□ 0.77
RAB28-202ENST00000330852 CDC25AP30304 524 aa19.89■□□□□ 0.77
RAB28-202ENST00000330852 GRM5P41594 1212 aa19.89■□□□□ 0.77
RAB28-202ENST00000330852 YARSP54577 528 aaKnown RBP19.89■□□□□ 0.77
RAB28-202ENST00000330852 PTPN5P54829 565 aa19.89■□□□□ 0.77
RAB28-202ENST00000330852 MAPK7Q13164 816 aa19.89■□□□□ 0.77
RAB28-202ENST00000330852 FAM171A1Q5VUB5 890 aa19.89■□□□□ 0.77
RAB28-202ENST00000330852 DCLRE1AQ6PJP8 1040 aa19.89■□□□□ 0.77
RAB28-202ENST00000330852 PALB2Q86YC2 1186 aa19.89■□□□□ 0.77
RAB28-202ENST00000330852 SYT2Q8N9I0 419 aaPredicted RBP19.89■□□□□ 0.77
RAB28-202ENST00000330852 SPIRE2Q8WWL2 714 aa19.89■□□□□ 0.77
RAB28-202ENST00000330852 B3GALT6Q96L58 329 aa19.89■□□□□ 0.77
RAB28-202ENST00000330852 AK8Q96MA6 479 aa19.89■□□□□ 0.77
RAB28-202ENST00000330852 PPP1R10Q96QC0 940 aaKnown RBP19.89■□□□□ 0.77
RAB28-202ENST00000330852 RUSC1Q9BVN2 902 aa19.89■□□□□ 0.77
RAB28-202ENST00000330852 IRF2BPLQ9H1B7 796 aa19.89■□□□□ 0.77
RAB28-202ENST00000330852 PTPRHQ9HD43 1115 aa19.89■□□□□ 0.77
RAB28-202ENST00000330852 KIF4AO95239 1232 aa19.88■□□□□ 0.77
RAB28-202ENST00000330852 BMP15O95972 392 aa19.88■□□□□ 0.77
RAB28-202ENST00000330852 SMTNP53814 917 aa19.88■□□□□ 0.77
RAB28-202ENST00000330852 XKR4Q5GH76 650 aa19.88■□□□□ 0.77
RAB28-202ENST00000330852 RTP2Q5QGT7 225 aa19.88■□□□□ 0.77
RAB28-202ENST00000330852 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.88■□□□□ 0.77
RAB28-202ENST00000330852 SMG7Q92540 1137 aaKnown RBP19.88■□□□□ 0.77
RAB28-202ENST00000330852 RABGGTAQ92696 567 aa19.88■□□□□ 0.77
RAB28-202ENST00000330852 CDK5RAP3Q96JB5 506 aa19.88■□□□□ 0.77
RAB28-202ENST00000330852 TRAPPC3O43617 180 aa19.88■□□□□ 0.77
RAB28-202ENST00000330852 ASGR2P07307 311 aa19.88■□□□□ 0.77
RAB28-202ENST00000330852 AVPR2P30518 371 aa19.88■□□□□ 0.77
RAB28-202ENST00000330852 TDGQ13569 410 aa19.88■□□□□ 0.77
RAB28-202ENST00000330852 KCNK18Q7Z418 384 aa19.88■□□□□ 0.77
RAB28-202ENST00000330852 LNX1Q8TBB1 728 aaPredicted RBP19.88■□□□□ 0.77
RAB28-202ENST00000330852 NXPE3Q969Y0 559 aa19.88■□□□□ 0.77
RAB28-202ENST00000330852 DDX27Q96GQ7 796 aaKnown RBP19.88■□□□□ 0.77
RAB28-202ENST00000330852 TBC1D32Q96NH3 1257 aa19.88■□□□□ 0.77
RAB28-202ENST00000330852 PRKD2Q9BZL6 878 aa19.88■□□□□ 0.77
RAB28-202ENST00000330852 CDT1Q9H211 546 aa19.88■□□□□ 0.77
RAB28-202ENST00000330852 PIDD1Q9HB75 910 aa19.88■□□□□ 0.77
RAB28-202ENST00000330852 SLC38A7Q9NVC3 462 aa19.88■□□□□ 0.77
RAB28-202ENST00000330852 CLUHO75153 1309 aa19.87■□□□□ 0.77
RAB28-202ENST00000330852 VWA3AA6NCI4 1184 aa19.87■□□□□ 0.77
RAB28-202ENST00000330852 RFPL2O75678 378 aa19.87■□□□□ 0.77
RAB28-202ENST00000330852 ZMYND10O75800 440 aa19.87■□□□□ 0.77
RAB28-202ENST00000330852 CD2BP2O95400 341 aaKnown RBP19.87■□□□□ 0.77
RAB28-202ENST00000330852 MCF2P10911 925 aa19.87■□□□□ 0.77
RAB28-202ENST00000330852 PSMD5Q16401 504 aa19.87■□□□□ 0.77
RAB28-202ENST00000330852 ZNF568Q3ZCX4 644 aa19.87■□□□□ 0.77
RAB28-202ENST00000330852 LARP1BQ659C4 914 aaKnown RBP19.87■□□□□ 0.77
RAB28-202ENST00000330852 RTL10Q7L3V2 364 aa19.87■□□□□ 0.77
RAB28-202ENST00000330852 ZNF707Q96C28 371 aaPredicted RBP19.87■□□□□ 0.77
RAB28-202ENST00000330852 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.87■□□□□ 0.77
RAB28-202ENST00000330852 CACNG4Q9UBN1 327 aa19.87■□□□□ 0.77
RAB28-202ENST00000330852 H0YCG3 227 aa19.86■□□□□ 0.77
RAB28-202ENST00000330852 HNRNPA1P09651 372 aaKnown RBP eCLIP19.86■□□□□ 0.77
RAB28-202ENST00000330852 PLS3P13797 630 aa19.86■□□□□ 0.77
RAB28-202ENST00000330852 SCP2P22307 547 aa19.86■□□□□ 0.77
RAB28-202ENST00000330852 PROZP22891 400 aa19.86■□□□□ 0.77
RAB28-202ENST00000330852 STRN3Q13033 797 aa19.86■□□□□ 0.77
RAB28-202ENST00000330852 PRSS55Q6UWB4 352 aaPredicted RBP19.86■□□□□ 0.77
RAB28-202ENST00000330852 ALKAL1Q6UXT8 129 aa19.86■□□□□ 0.77
RAB28-202ENST00000330852 BRAPQ7Z569 592 aa19.86■□□□□ 0.77
RAB28-202ENST00000330852 CEP57Q86XR8 500 aa19.86■□□□□ 0.77
RAB28-202ENST00000330852 HASPINQ8TF76 798 aa19.86■□□□□ 0.77
RAB28-202ENST00000330852 PNMA5Q96PV4 448 aa19.86■□□□□ 0.77
RAB28-202ENST00000330852 CLSTN3Q9BQT9 956 aa19.86■□□□□ 0.77
RAB28-202ENST00000330852 TCHPQ9BT92 498 aa19.86■□□□□ 0.77
RAB28-202ENST00000330852 TARS2Q9BW92 718 aaKnown RBP19.86■□□□□ 0.77
RAB28-202ENST00000330852 EPS15L1Q9UBC2 864 aa19.86■□□□□ 0.77
RAB28-202ENST00000330852 FBXW11Q9UKB1 542 aa19.86■□□□□ 0.77
RAB28-202ENST00000330852 SMIM28A0A1B0GU29 152 aa19.85■□□□□ 0.77
RAB28-202ENST00000330852 B3GAT3O94766 335 aa19.85■□□□□ 0.77
RAB28-202ENST00000330852 SPATA31D3P0C874 917 aa19.85■□□□□ 0.77
RAB28-202ENST00000330852 RPL17P18621 184 aaKnown RBP19.85■□□□□ 0.77
RAB28-202ENST00000330852 FGFR3P22607 806 aa19.85■□□□□ 0.77
RAB28-202ENST00000330852 PDCD11Q14690 1871 aaKnown RBP19.85■□□□□ 0.77
RAB28-202ENST00000330852 ZRSR1Q15695 479 aaKnown RBP19.85■□□□□ 0.77
RAB28-202ENST00000330852 UPP1Q16831 310 aa19.85■□□□□ 0.77
RAB28-202ENST00000330852 IER5LQ5T953 404 aa19.85■□□□□ 0.77
RAB28-202ENST00000330852 MPZL3Q6UWV2 235 aa19.85■□□□□ 0.77
RAB28-202ENST00000330852 SPATA31D4Q6ZUB0 917 aa19.85■□□□□ 0.77
RAB28-202ENST00000330852 TAS1R3Q7RTX0 852 aa19.85■□□□□ 0.77
RAB28-202ENST00000330852 FEZF2Q8TBJ5 459 aa19.85■□□□□ 0.77
RAB28-202ENST00000330852 KCNN1Q92952 543 aa19.85■□□□□ 0.77
RAB28-202ENST00000330852 ACAP3Q96P50 834 aa19.85■□□□□ 0.77
RAB28-202ENST00000330852 CXCL16Q9H2A7 254 aa19.85■□□□□ 0.77
RAB28-202ENST00000330852 KCNK12Q9HB15 430 aa19.85■□□□□ 0.77
RAB28-202ENST00000330852 LARSQ9P2J5 1176 aaKnown RBP19.85■□□□□ 0.77
RAB28-202ENST00000330852 ZFP37Q9Y6Q3 630 aaPredicted RBP19.85■□□□□ 0.77
RAB28-202ENST00000330852 SLC16A4O15374 487 aa19.85■□□□□ 0.77
RAB28-202ENST00000330852 KCNE1P15382 129 aa19.85■□□□□ 0.77
RAB28-202ENST00000330852 HOXA9P31269 272 aa19.85■□□□□ 0.77
RAB28-202ENST00000330852 SLC12A3P55017 1021 aa19.85■□□□□ 0.77
RAB28-202ENST00000330852 TMEM119Q4V9L6 283 aa19.85■□□□□ 0.77
RAB28-202ENST00000330852 LIN9Q5TKA1 542 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms