RNA–Protein interactions for RNA: ENST00000330588.4

SMG1-201, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 1,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-201ENST00000330588 KIAA1671Q9BY89 1806 aa7.06□□□□□ -1.28
SMG1-201ENST00000330588 DNAH12Q6ZR08 3092 aa7.06□□□□□ -1.28
SMG1-201ENST00000330588 A0A0U1RQF3 1178 aa7.06□□□□□ -1.28
SMG1-201ENST00000330588 LAD1O00515 517 aa7.06□□□□□ -1.28
SMG1-201ENST00000330588 MGEA5O60502 916 aa7.06□□□□□ -1.28
SMG1-201ENST00000330588 JAK2O60674 1132 aa7.06□□□□□ -1.28
SMG1-201ENST00000330588 VTNP04004 478 aa7.06□□□□□ -1.28
SMG1-201ENST00000330588 ZSCAN20P17040 1043 aaPredicted RBP7.06□□□□□ -1.28
SMG1-201ENST00000330588 U2AF2P26368 475 aaKnown RBP eCLIP7.06□□□□□ -1.28
SMG1-201ENST00000330588 AXLP30530 894 aa7.06□□□□□ -1.28
SMG1-201ENST00000330588 YWHABP31946 246 aaKnown RBP7.06□□□□□ -1.28
SMG1-201ENST00000330588 CTNNB1P35222 781 aa7.06□□□□□ -1.28
SMG1-201ENST00000330588 ADH7P40394 386 aa7.06□□□□□ -1.28
SMG1-201ENST00000330588 TYRO3Q06418 890 aa7.06□□□□□ -1.28
SMG1-201ENST00000330588 TMEM62Q0P6H9 643 aa7.06□□□□□ -1.28
SMG1-201ENST00000330588 GPM6BQ13491 265 aa7.06□□□□□ -1.28
SMG1-201ENST00000330588 MXD4Q14582 209 aaPredicted RBP7.06□□□□□ -1.28
SMG1-201ENST00000330588 CALCRLQ16602 461 aa7.06□□□□□ -1.28
SMG1-201ENST00000330588 LEXMQ3ZCV2 418 aa7.06□□□□□ -1.28
SMG1-201ENST00000330588 EARS2Q5JPH6 523 aaKnown RBP7.06□□□□□ -1.28
SMG1-201ENST00000330588 FAM117BQ6P1L5 589 aa7.06□□□□□ -1.28
SMG1-201ENST00000330588 SRGAP1Q7Z6B7 1085 aa7.06□□□□□ -1.28
SMG1-201ENST00000330588 SCG3Q8WXD2 468 aaKnown RBP7.06□□□□□ -1.28
SMG1-201ENST00000330588 PPP2R3CQ969Q6 453 aa7.06□□□□□ -1.28
SMG1-201ENST00000330588 ZBTB10Q96DT7 871 aa7.06□□□□□ -1.28
SMG1-201ENST00000330588 OSMRQ99650 979 aa7.06□□□□□ -1.28
SMG1-201ENST00000330588 LXNQ9BS40 222 aa7.06□□□□□ -1.28
SMG1-201ENST00000330588 POLR3CQ9BUI4 534 aaPredicted RBP7.06□□□□□ -1.28
SMG1-201ENST00000330588 MRPL9Q9BYD2 267 aaKnown RBP7.06□□□□□ -1.28
SMG1-201ENST00000330588 TMEM117Q9H0C3 514 aa7.06□□□□□ -1.28
SMG1-201ENST00000330588 NSUN3Q9H649 340 aaKnown RBP7.06□□□□□ -1.28
SMG1-201ENST00000330588 TUFT1Q9NNX1 390 aa7.06□□□□□ -1.28
SMG1-201ENST00000330588 TPSG1Q9NRR2 321 aa7.06□□□□□ -1.28
SMG1-201ENST00000330588 STK39Q9UEW8 545 aa7.06□□□□□ -1.28
SMG1-201ENST00000330588 RFXAPO00287 272 aa7.05□□□□□ -1.28
SMG1-201ENST00000330588 MARCH6O60337 910 aa7.05□□□□□ -1.28
SMG1-201ENST00000330588 ZNF623O75123 536 aa7.05□□□□□ -1.28
SMG1-201ENST00000330588 LAG3P18627 525 aa7.05□□□□□ -1.28
SMG1-201ENST00000330588 PPM1AP35813 382 aa7.05□□□□□ -1.28
SMG1-201ENST00000330588 PRPHP41219 470 aa7.05□□□□□ -1.28
SMG1-201ENST00000330588 MTERF2Q49AM1 385 aa7.05□□□□□ -1.28
SMG1-201ENST00000330588 C8orf86Q6ZUL3 223 aa7.05□□□□□ -1.28
SMG1-201ENST00000330588 ECHDC2Q86YB7 292 aa7.05□□□□□ -1.28
SMG1-201ENST00000330588 NOSTRINQ8IVI9 506 aa7.05□□□□□ -1.28
SMG1-201ENST00000330588 CCDC83Q8IWF9 413 aa7.05□□□□□ -1.28
SMG1-201ENST00000330588 LRRC71Q8N4P6 559 aa7.05□□□□□ -1.28
SMG1-201ENST00000330588 PSPC1Q8WXF1 523 aaKnown RBP7.05□□□□□ -1.28
SMG1-201ENST00000330588 PABPC5Q96DU9 382 aaKnown RBP7.05□□□□□ -1.28
SMG1-201ENST00000330588 CCDC51Q96ER9 411 aa7.05□□□□□ -1.28
SMG1-201ENST00000330588 HSH2DQ96JZ2 352 aa7.05□□□□□ -1.28
SMG1-201ENST00000330588 CEP170P1Q96L14 293 aa7.05□□□□□ -1.28
SMG1-201ENST00000330588 EIF2AK1Q9BQI3 630 aaKnown RBP7.05□□□□□ -1.28
SMG1-201ENST00000330588 MKNK1Q9BUB5 465 aa7.05□□□□□ -1.28
SMG1-201ENST00000330588 PHACTR1Q9C0D0 580 aa7.05□□□□□ -1.28
SMG1-201ENST00000330588 TTC12Q9H892 705 aaPredicted RBP7.05□□□□□ -1.28
SMG1-201ENST00000330588 CERS4Q9HA82 394 aa7.05□□□□□ -1.28
SMG1-201ENST00000330588 ATP6V0A4Q9HBG4 840 aa7.05□□□□□ -1.28
SMG1-201ENST00000330588 BRD7Q9NPI1 651 aa7.05□□□□□ -1.28
SMG1-201ENST00000330588 GJB4Q9NTQ9 266 aa7.05□□□□□ -1.28
SMG1-201ENST00000330588 DBR1Q9UK59 544 aaKnown RBP7.05□□□□□ -1.28
SMG1-201ENST00000330588 NOL7Q9UMY1 257 aaKnown RBP7.05□□□□□ -1.28
SMG1-201ENST00000330588 PLAGL2Q9UPG8 496 aa7.05□□□□□ -1.28
SMG1-201ENST00000330588 MRPL42Q9Y6G3 142 aaKnown RBP7.05□□□□□ -1.28
SMG1-201ENST00000330588 ATG2AQ2TAZ0 1938 aa7.05□□□□□ -1.28
SMG1-201ENST00000330588 INPPL1O15357 1258 aa7.04□□□□□ -1.28
SMG1-201ENST00000330588 SLC26A4O43511 780 aa7.04□□□□□ -1.28
SMG1-201ENST00000330588 SLITRK3O94933 977 aa7.04□□□□□ -1.28
SMG1-201ENST00000330588 RPA1P27694 616 aa7.04□□□□□ -1.28
SMG1-201ENST00000330588 POLGP54098 1239 aaPredicted RBP7.04□□□□□ -1.28
SMG1-201ENST00000330588 PLCB3Q01970 1234 aa7.04□□□□□ -1.28
SMG1-201ENST00000330588 TFDP1Q14186 410 aa7.04□□□□□ -1.28
SMG1-201ENST00000330588 PDIA5Q14554 519 aa7.04□□□□□ -1.28
SMG1-201ENST00000330588 EMC2Q15006 297 aa7.04□□□□□ -1.28
SMG1-201ENST00000330588 CCDC85BQ15834 202 aaPredicted RBP7.04□□□□□ -1.28
SMG1-201ENST00000330588 TMEM266Q2M3C6 531 aa7.04□□□□□ -1.28
SMG1-201ENST00000330588 HAUS3Q68CZ6 603 aa7.04□□□□□ -1.28
SMG1-201ENST00000330588 NCAPH2Q6IBW4 605 aa7.04□□□□□ -1.28
SMG1-201ENST00000330588 SPRED2Q7Z698 418 aa7.04□□□□□ -1.28
SMG1-201ENST00000330588 LRRC43Q8N309 656 aa7.04□□□□□ -1.28
SMG1-201ENST00000330588 FAM184AQ8NB25 1140 aa7.04□□□□□ -1.28
SMG1-201ENST00000330588 CNNM3Q8NE01 707 aa7.04□□□□□ -1.28
SMG1-201ENST00000330588 ERMNQ8TAM6 284 aa7.04□□□□□ -1.28
SMG1-201ENST00000330588 GJA10Q969M2 543 aa7.04□□□□□ -1.28
SMG1-201ENST00000330588 DYDC2Q96IM9 177 aa7.04□□□□□ -1.28
SMG1-201ENST00000330588 SUSD3Q96L08 255 aa7.04□□□□□ -1.28
SMG1-201ENST00000330588 CEP63Q96MT8 703 aa7.04□□□□□ -1.28
SMG1-201ENST00000330588 TBC1D32Q96NH3 1257 aa7.04□□□□□ -1.28
SMG1-201ENST00000330588 CDCA3Q99618 268 aaPredicted RBP7.04□□□□□ -1.28
SMG1-201ENST00000330588 UBE2ZQ9H832 354 aaPredicted RBP7.04□□□□□ -1.28
SMG1-201ENST00000330588 IFT122Q9HBG6 1241 aa7.04□□□□□ -1.28
SMG1-201ENST00000330588 AGPAT5Q9NUQ2 364 aa7.04□□□□□ -1.28
SMG1-201ENST00000330588 SUCLA2Q9P2R7 463 aaPredicted RBP7.04□□□□□ -1.28
SMG1-201ENST00000330588 WRAP73Q9P2S5 460 aaPredicted RBP7.04□□□□□ -1.28
SMG1-201ENST00000330588 FAM50BQ9Y247 325 aa7.04□□□□□ -1.28
SMG1-201ENST00000330588 HCN4Q9Y3Q4 1203 aa7.04□□□□□ -1.28
SMG1-201ENST00000330588 PCDHB12Q9Y5F1 795 aa7.04□□□□□ -1.28
SMG1-201ENST00000330588 COL4A3BPQ9Y5P4 624 aa7.04□□□□□ -1.28
SMG1-201ENST00000330588 FAM229AH3BQW9 127 aa7.03□□□□□ -1.28
SMG1-201ENST00000330588 ITGB1P05556 798 aa7.03□□□□□ -1.28
SMG1-201ENST00000330588 OR52Z1P0C646 297 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms