RNA–Protein interactions for RNA: ENST00000328514.11

GINS3-202, Transcript of GINS complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GINS3, Length 1,932 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-202ENST00000328514 FIZ1Q96SL8 496 aa12.03□□□□□ -0.48
GINS3-202ENST00000328514 KIAA1683Q9H0B3 1180 aa12.03□□□□□ -0.48
GINS3-202ENST00000328514 BHMT2Q9H2M3 363 aa12.03□□□□□ -0.48
GINS3-202ENST00000328514 MLXIPLQ9NP71 852 aa12.03□□□□□ -0.48
GINS3-202ENST00000328514 VAV3Q9UKW4 847 aa12.03□□□□□ -0.48
GINS3-202ENST00000328514 FRMD4BQ9Y2L6 1034 aa12.03□□□□□ -0.48
GINS3-202ENST00000328514 LRCH1Q9Y2L9 728 aa12.03□□□□□ -0.48
GINS3-202ENST00000328514 NEU2Q9Y3R4 380 aa12.03□□□□□ -0.48
GINS3-202ENST00000328514 COL14A1Q05707 1796 aaKnown RBP12.02□□□□□ -0.48
GINS3-202ENST00000328514 MEIS1O00470 390 aa12.02□□□□□ -0.49
GINS3-202ENST00000328514 PMM2O15305 246 aa12.02□□□□□ -0.49
GINS3-202ENST00000328514 SMIM24O75264 130 aa12.02□□□□□ -0.49
GINS3-202ENST00000328514 GNAT1P11488 350 aa12.02□□□□□ -0.49
GINS3-202ENST00000328514 CETPP11597 493 aa12.02□□□□□ -0.49
GINS3-202ENST00000328514 CHRNB2P17787 502 aa12.02□□□□□ -0.49
GINS3-202ENST00000328514 SP100P23497 879 aaPredicted RBP12.02□□□□□ -0.49
GINS3-202ENST00000328514 PTPN4P29074 926 aa12.02□□□□□ -0.49
GINS3-202ENST00000328514 CIITAP33076 1130 aa12.02□□□□□ -0.49
GINS3-202ENST00000328514 MCCD1P59942 119 aaPredicted RBP12.02□□□□□ -0.49
GINS3-202ENST00000328514 ARHGAP4P98171 946 aa12.02□□□□□ -0.49
GINS3-202ENST00000328514 MESDQ14696 234 aa12.02□□□□□ -0.49
GINS3-202ENST00000328514 TRIM68Q6AZZ1 485 aa12.02□□□□□ -0.49
GINS3-202ENST00000328514 OR52E8Q6IFG1 317 aa12.02□□□□□ -0.49
GINS3-202ENST00000328514 HS2ST1Q7LGA3 356 aa12.02□□□□□ -0.49
GINS3-202ENST00000328514 BBOF1Q8ND07 529 aa12.02□□□□□ -0.49
GINS3-202ENST00000328514 TEKT4Q8WW24 435 aa12.02□□□□□ -0.49
GINS3-202ENST00000328514 ZNF333Q96JL9 665 aa12.02□□□□□ -0.49
GINS3-202ENST00000328514 VCXQ9H320 206 aa12.02□□□□□ -0.49
GINS3-202ENST00000328514 CYLDQ9NQC7 956 aa12.02□□□□□ -0.49
GINS3-202ENST00000328514 AGPAT3Q9NRZ7 376 aa12.02□□□□□ -0.49
GINS3-202ENST00000328514 SEPT11Q9NVA2 429 aaKnown RBP12.02□□□□□ -0.49
GINS3-202ENST00000328514 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.02□□□□□ -0.49
GINS3-202ENST00000328514 WDR35Q9P2L0 1181 aa12.02□□□□□ -0.49
GINS3-202ENST00000328514 STOML1Q9UBI4 398 aa12.02□□□□□ -0.49
GINS3-202ENST00000328514 NOCTQ9UK39 431 aaKnown RBP12.02□□□□□ -0.49
GINS3-202ENST00000328514 GTF3C4Q9UKN8 822 aa12.02□□□□□ -0.49
GINS3-202ENST00000328514 PHTF1Q9UMS5 762 aa12.02□□□□□ -0.49
GINS3-202ENST00000328514 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.02□□□□□ -0.49
GINS3-202ENST00000328514 RABGAP1Q9Y3P9 1069 aa12.02□□□□□ -0.49
GINS3-202ENST00000328514 USP17L15C9J2P7 530 aa12.01□□□□□ -0.49
GINS3-202ENST00000328514 USP17L10C9JJH3 530 aa12.01□□□□□ -0.49
GINS3-202ENST00000328514 USP17L13C9JLJ4 530 aa12.01□□□□□ -0.49
GINS3-202ENST00000328514 USP17L11C9JVI0 530 aa12.01□□□□□ -0.49
GINS3-202ENST00000328514 USP17L18D6R9N7 530 aa12.01□□□□□ -0.49
GINS3-202ENST00000328514 USP17L22D6RA61 530 aa12.01□□□□□ -0.49
GINS3-202ENST00000328514 USP17L17D6RBQ6 530 aa12.01□□□□□ -0.49
GINS3-202ENST00000328514 USP17L19D6RCP7 530 aa12.01□□□□□ -0.49
GINS3-202ENST00000328514 USP17L20D6RJB6 530 aa12.01□□□□□ -0.49
GINS3-202ENST00000328514 MEIS2O14770 477 aa12.01□□□□□ -0.49
GINS3-202ENST00000328514 EDF1O60869 148 aaKnown RBP12.01□□□□□ -0.49
GINS3-202ENST00000328514 GAS8O95995 478 aa12.01□□□□□ -0.49
GINS3-202ENST00000328514 TARSP26639 723 aaKnown RBP12.01□□□□□ -0.49
GINS3-202ENST00000328514 ITGA8P53708 1063 aa12.01□□□□□ -0.49
GINS3-202ENST00000328514 USP17L24Q0WX57 530 aa12.01□□□□□ -0.49
GINS3-202ENST00000328514 BFSP1Q12934 665 aa12.01□□□□□ -0.49
GINS3-202ENST00000328514 RASA2Q15283 850 aa12.01□□□□□ -0.49
GINS3-202ENST00000328514 PDK4Q16654 411 aa12.01□□□□□ -0.49
GINS3-202ENST00000328514 SGO2Q562F6 1265 aa12.01□□□□□ -0.49
GINS3-202ENST00000328514 USP17L6PQ6QN14 398 aa12.01□□□□□ -0.49
GINS3-202ENST00000328514 STXBP4Q6ZWJ1 553 aa12.01□□□□□ -0.49
GINS3-202ENST00000328514 C1orf186Q6ZWK4 172 aa12.01□□□□□ -0.49
GINS3-202ENST00000328514 ZNF720Q7Z2F6 126 aa12.01□□□□□ -0.49
GINS3-202ENST00000328514 TRABD2AQ86V40 505 aa12.01□□□□□ -0.49
GINS3-202ENST00000328514 LONP2Q86WA8 852 aa12.01□□□□□ -0.49
GINS3-202ENST00000328514 SLF2Q8IX21 1173 aa12.01□□□□□ -0.49
GINS3-202ENST00000328514 SRRM1Q8IYB3 904 aaKnown RBP12.01□□□□□ -0.49
GINS3-202ENST00000328514 RPUSD2Q8IZ73 545 aaKnown RBP12.01□□□□□ -0.49
GINS3-202ENST00000328514 ZNF564Q8TBZ8 553 aaPredicted RBP12.01□□□□□ -0.49
GINS3-202ENST00000328514 C10orf82Q8WW14 230 aa12.01□□□□□ -0.49
GINS3-202ENST00000328514 CDCA7Q9BWT1 371 aaPredicted RBP12.01□□□□□ -0.49
GINS3-202ENST00000328514 DENND2DQ9H6A0 471 aaPredicted RBP12.01□□□□□ -0.49
GINS3-202ENST00000328514 SENP1Q9P0U3 644 aa12.01□□□□□ -0.49
GINS3-202ENST00000328514 ASIC3Q9UHC3 531 aa12.01□□□□□ -0.49
GINS3-202ENST00000328514 HAO1Q9UJM8 370 aa12.01□□□□□ -0.49
GINS3-202ENST00000328514 SMG5Q9UPR3 1016 aaKnown RBP12.01□□□□□ -0.49
GINS3-202ENST00000328514 SPDYE5A6NIY4 337 aa12.01□□□□□ -0.49
GINS3-202ENST00000328514 C2CD2LO14523 706 aa12.01□□□□□ -0.49
GINS3-202ENST00000328514 SPOPO43791 374 aa12.01□□□□□ -0.49
GINS3-202ENST00000328514 AP1G2O75843 785 aa12.01□□□□□ -0.49
GINS3-202ENST00000328514 AKR1B1P15121 316 aa12.01□□□□□ -0.49
GINS3-202ENST00000328514 MARK3P27448 753 aa12.01□□□□□ -0.49
GINS3-202ENST00000328514 VHLP40337 213 aa12.01□□□□□ -0.49
GINS3-202ENST00000328514 TUBP50607 506 aa12.01□□□□□ -0.49
GINS3-202ENST00000328514 SPARCL1Q14515 664 aa12.01□□□□□ -0.49
GINS3-202ENST00000328514 ARHGAP44Q17R89 818 aa12.01□□□□□ -0.49
GINS3-202ENST00000328514 TTBK2Q6IQ55 1244 aa12.01□□□□□ -0.49
GINS3-202ENST00000328514 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.01□□□□□ -0.49
GINS3-202ENST00000328514 SLC17A8Q8NDX2 589 aa12.01□□□□□ -0.49
GINS3-202ENST00000328514 PCDHB18PQ96TA0 734 aa12.01□□□□□ -0.49
GINS3-202ENST00000328514 POP1Q99575 1024 aaKnown RBP12.01□□□□□ -0.49
GINS3-202ENST00000328514 STRA6Q9BX79 667 aa12.01□□□□□ -0.49
GINS3-202ENST00000328514 PARVGQ9HBI0 331 aa12.01□□□□□ -0.49
GINS3-202ENST00000328514 KCND2Q9NZV8 630 aa12.01□□□□□ -0.49
GINS3-202ENST00000328514 GREB1LQ9C091 1923 aaPredicted RBP12.01□□□□□ -0.49
GINS3-202ENST00000328514 TMEM110-MUSTN1A8MSY1 372 aa12□□□□□ -0.49
GINS3-202ENST00000328514 RASA4BC9J798 803 aa12□□□□□ -0.49
GINS3-202ENST00000328514 RASA4O43374 803 aa12□□□□□ -0.49
GINS3-202ENST00000328514 LRRN2O75325 713 aa12□□□□□ -0.49
GINS3-202ENST00000328514 FAM13AO94988 1023 aa12□□□□□ -0.49
GINS3-202ENST00000328514 FOSP01100 380 aaPredicted RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms