RNA–Protein interactions for RNA: ENST00000328111.6

DNMT3B-202, Transcript of DNA methyltransferase 3 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DNMT3B, Length 4,336 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3B-202ENST00000328111 ITGA4P13612 1032 aa14.65□□□□□ -0.06
DNMT3B-202ENST00000328111 PDIA2Q13087 525 aaKnown RBP14.65□□□□□ -0.06
DNMT3B-202ENST00000328111 MUM1Q2TAK8 710 aa14.65□□□□□ -0.06
DNMT3B-202ENST00000328111 APOBEC3FQ8IUX4 373 aaKnown RBP14.65□□□□□ -0.06
DNMT3B-202ENST00000328111 DNAAF3Q8N9W5 541 aa14.65□□□□□ -0.06
DNMT3B-202ENST00000328111 SPATA33Q96N06 139 aa14.65□□□□□ -0.06
DNMT3B-202ENST00000328111 IFT122Q9HBG6 1241 aa14.65□□□□□ -0.06
DNMT3B-202ENST00000328111 P4HA2O15460 535 aa14.64□□□□□ -0.07
DNMT3B-202ENST00000328111 BAG2O95816 211 aa14.64□□□□□ -0.07
DNMT3B-202ENST00000328111 EMC2Q15006 297 aa14.64□□□□□ -0.07
DNMT3B-202ENST00000328111 KYNUQ16719 465 aa14.64□□□□□ -0.07
DNMT3B-202ENST00000328111 ANGEL2Q5VTE6 544 aaKnown RBP14.64□□□□□ -0.07
DNMT3B-202ENST00000328111 OTOP1Q7RTM1 612 aa14.64□□□□□ -0.07
DNMT3B-202ENST00000328111 SLC20A1Q8WUM9 679 aa14.64□□□□□ -0.07
DNMT3B-202ENST00000328111 TTC17Q96AE7 1141 aa14.64□□□□□ -0.07
DNMT3B-202ENST00000328111 RPS6KC1Q96S38 1066 aa14.64□□□□□ -0.07
DNMT3B-202ENST00000328111 ANKEF1Q9NU02 776 aa14.64□□□□□ -0.07
DNMT3B-202ENST00000328111 GGT7Q9UJ14 662 aa14.64□□□□□ -0.07
DNMT3B-202ENST00000328111 M0QYV0 167 aa14.64□□□□□ -0.07
DNMT3B-202ENST00000328111 MTM1Q13496 603 aa14.64□□□□□ -0.07
DNMT3B-202ENST00000328111 TFDP2Q14188 446 aa14.64□□□□□ -0.07
DNMT3B-202ENST00000328111 GPR162Q16538 588 aa14.64□□□□□ -0.07
DNMT3B-202ENST00000328111 NBPF9Q3BBW0 867 aa14.64□□□□□ -0.07
DNMT3B-202ENST00000328111 DACT2Q5SW24 774 aa14.64□□□□□ -0.07
DNMT3B-202ENST00000328111 LRIG3Q6UXM1 1119 aa14.64□□□□□ -0.07
DNMT3B-202ENST00000328111 TTC13Q8NBP0 860 aa14.64□□□□□ -0.07
DNMT3B-202ENST00000328111 FRMD3A2A2Y4 597 aa14.64□□□□□ -0.07
DNMT3B-202ENST00000328111 SEZ6Q53EL9 994 aa14.64□□□□□ -0.07
DNMT3B-202ENST00000328111 LRRC31Q6UY01 552 aa14.64□□□□□ -0.07
DNMT3B-202ENST00000328111 OSBPL8Q9BZF1 889 aa14.64□□□□□ -0.07
DNMT3B-202ENST00000328111 SPAG7O75391 227 aa14.63□□□□□ -0.07
DNMT3B-202ENST00000328111 SLC1A1P43005 524 aa14.63□□□□□ -0.07
DNMT3B-202ENST00000328111 PHKA2P46019 1235 aa14.63□□□□□ -0.07
DNMT3B-202ENST00000328111 FAM102AQ5T9C2 384 aaPredicted RBP14.63□□□□□ -0.07
DNMT3B-202ENST00000328111 ZKSCAN4Q969J2 545 aaPredicted RBP14.63□□□□□ -0.07
DNMT3B-202ENST00000328111 SLC10A4Q96EP9 437 aa14.63□□□□□ -0.07
DNMT3B-202ENST00000328111 GTF3C4Q9UKN8 822 aa14.63□□□□□ -0.07
DNMT3B-202ENST00000328111 REXO2Q9Y3B8 237 aaKnown RBP14.63□□□□□ -0.07
DNMT3B-202ENST00000328111 TMEM150BA6NC51 233 aa14.63□□□□□ -0.07
DNMT3B-202ENST00000328111 TXNDC9O14530 226 aa14.63□□□□□ -0.07
DNMT3B-202ENST00000328111 KRT7P08729 469 aa14.63□□□□□ -0.07
DNMT3B-202ENST00000328111 CHN1P15882 459 aa14.63□□□□□ -0.07
DNMT3B-202ENST00000328111 SLC12A3P55017 1021 aa14.63□□□□□ -0.07
DNMT3B-202ENST00000328111 PSMD6Q15008 389 aa14.63□□□□□ -0.07
DNMT3B-202ENST00000328111 MDM1Q8TC05 714 aa14.63□□□□□ -0.07
DNMT3B-202ENST00000328111 IDI2Q9BXS1 227 aa14.63□□□□□ -0.07
DNMT3B-202ENST00000328111 A0A0G2JND7 137 aa14.63□□□□□ -0.07
DNMT3B-202ENST00000328111 PABPN1LA6NDY0 278 aaKnown RBP14.63□□□□□ -0.07
DNMT3B-202ENST00000328111 PRKCBP05771 671 aa14.63□□□□□ -0.07
DNMT3B-202ENST00000328111 NPTX2P47972 431 aa14.63□□□□□ -0.07
DNMT3B-202ENST00000328111 GMPSP49915 693 aaPredicted RBP14.63□□□□□ -0.07
DNMT3B-202ENST00000328111 NOP14P78316 857 aaKnown RBP14.63□□□□□ -0.07
DNMT3B-202ENST00000328111 NPY5RQ15761 445 aa14.63□□□□□ -0.07
DNMT3B-202ENST00000328111 MUM1L1Q5H9M0 696 aa14.63□□□□□ -0.07
DNMT3B-202ENST00000328111 C15orf52Q6ZUT6 534 aaKnown RBP14.63□□□□□ -0.07
DNMT3B-202ENST00000328111 ZC3H18Q86VM9 953 aaKnown RBP14.63□□□□□ -0.07
DNMT3B-202ENST00000328111 CDR2LQ86X02 465 aaPredicted RBP14.63□□□□□ -0.07
DNMT3B-202ENST00000328111 SMC1BQ8NDV3 1235 aa14.63□□□□□ -0.07
DNMT3B-202ENST00000328111 TGS1Q96RS0 853 aaKnown RBP14.63□□□□□ -0.07
DNMT3B-202ENST00000328111 NACA2Q9H009 215 aa14.63□□□□□ -0.07
DNMT3B-202ENST00000328111 C2orf40Q9H1Z8 148 aa14.63□□□□□ -0.07
DNMT3B-202ENST00000328111 SPC25Q9HBM1 224 aa14.63□□□□□ -0.07
DNMT3B-202ENST00000328111 MEIS2O14770 477 aa14.62□□□□□ -0.07
DNMT3B-202ENST00000328111 KRT3P12035 628 aa14.62□□□□□ -0.07
DNMT3B-202ENST00000328111 EFNA5P52803 228 aa14.62□□□□□ -0.07
DNMT3B-202ENST00000328111 NFX1Q12986 1120 aaKnown RBP14.62□□□□□ -0.07
DNMT3B-202ENST00000328111 MAPK7Q13164 816 aa14.62□□□□□ -0.07
DNMT3B-202ENST00000328111 FBXO25Q8TCJ0 367 aa14.62□□□□□ -0.07
DNMT3B-202ENST00000328111 CERKQ8TCT0 537 aa14.62□□□□□ -0.07
DNMT3B-202ENST00000328111 TAS1R2Q8TE23 839 aa14.62□□□□□ -0.07
DNMT3B-202ENST00000328111 C18orf8Q96DM3 657 aa14.62□□□□□ -0.07
DNMT3B-202ENST00000328111 MED15Q96RN5 788 aa14.62□□□□□ -0.07
DNMT3B-202ENST00000328111 RBM15Q96T37 977 aaKnown RBP eCLIP14.62□□□□□ -0.071e-7■■□□□ 13
DNMT3B-202ENST00000328111 ASNSD1Q9NWL6 643 aa14.62□□□□□ -0.07
DNMT3B-202ENST00000328111 IGSF9BQ9UPX0 1349 aa14.62□□□□□ -0.07
DNMT3B-202ENST00000328111 PIK3R2O00459 728 aa14.62□□□□□ -0.07
DNMT3B-202ENST00000328111 FBXW10Q5XX13 1052 aa14.62□□□□□ -0.07
DNMT3B-202ENST00000328111 SLC13A5Q86YT5 568 aaPredicted RBP14.62□□□□□ -0.07
DNMT3B-202ENST00000328111 GBP7Q8N8V2 638 aaPredicted RBP14.62□□□□□ -0.07
DNMT3B-202ENST00000328111 SEPT1Q8WYJ6 367 aa14.62□□□□□ -0.07
DNMT3B-202ENST00000328111 SCYL1Q96KG9 808 aa14.62□□□□□ -0.07
DNMT3B-202ENST00000328111 PRMT1Q99873 361 aaKnown RBP14.62□□□□□ -0.07
DNMT3B-202ENST00000328111 FAM198AQ9UFP1 575 aa14.62□□□□□ -0.07
DNMT3B-202ENST00000328111 DDX3XO00571 662 aaKnown RBP eCLIP14.62□□□□□ -0.072e-14■■■■□ 24.5
DNMT3B-202ENST00000328111 WEE2P0C1S8 567 aa14.62□□□□□ -0.07
DNMT3B-202ENST00000328111 SOX10P56693 466 aa14.62□□□□□ -0.07
DNMT3B-202ENST00000328111 ACTN3Q08043 901 aaPredicted RBP14.62□□□□□ -0.07
DNMT3B-202ENST00000328111 KCNMA1Q12791 1236 aa14.62□□□□□ -0.07
DNMT3B-202ENST00000328111 SLC15A2Q16348 729 aa14.62□□□□□ -0.07
DNMT3B-202ENST00000328111 NXNQ6DKJ4 435 aa14.62□□□□□ -0.07
DNMT3B-202ENST00000328111 GABPB2Q8TAK5 448 aaPredicted RBP14.62□□□□□ -0.07
DNMT3B-202ENST00000328111 ELMO3Q96BJ8 720 aa14.62□□□□□ -0.07
DNMT3B-202ENST00000328111 ZSWIM1Q9BR11 485 aa14.62□□□□□ -0.07
DNMT3B-202ENST00000328111 DCTN4Q9UJW0 460 aa14.62□□□□□ -0.07
DNMT3B-202ENST00000328111 TCP11X1B4DZS4 312 aa14.62□□□□□ -0.07
DNMT3B-202ENST00000328111 TM4SF1P30408 202 aa14.62□□□□□ -0.07
DNMT3B-202ENST00000328111 ACTR2P61160 394 aa14.62□□□□□ -0.07
DNMT3B-202ENST00000328111 SYCP2LQ5T4T6 812 aa14.62□□□□□ -0.07
DNMT3B-202ENST00000328111 LRRC71Q8N4P6 559 aa14.62□□□□□ -0.07
DNMT3B-202ENST00000328111 NSMCE1Q8WV22 266 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms